Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for YIPF5

Gene Name Gene ID Reads Annotation
YIPF5 ENSGALG00000007404 5598 Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]











Genes with expression patterns similar to YIPF5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YIPF5 ENSGALG00000007404 5598 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]
2. KLHL21 ENSGALG00000035211 6145 1.474 - - - - - - 0.717 0.757 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
3. RFC1 ENSGALG00000014298 6516 1.465 - - - - - - 0.714 0.751 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
4. TSEN15 ENSGALG00000004782 2520 0.856 - - - - - - - 0.856 - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
5. SH3BGRL ENSGALG00000007128 18708 0.855 - - - - - - - 0.855 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
6. ERLIN2 ENSGALG00000003092 18251 0.836 - - - - - - - 0.836 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
7. KDM3B ENSGALG00000007663 7189 0.831 - - - - - - - 0.831 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
8. CTSL2 CTSL2 7966 0.822 - - - - - - - 0.822 - -
9. MSH2 ENSGALG00000008962 9709 0.813 - - - - - - - 0.813 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
10. FAM207A ENSGALG00000007513 8748 0.81 - - - - - - - 0.810 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
11. RCN2 ENSGALG00000039284 17848 0.809 - - - - - - - 0.809 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
12. NDUFAF7 ENSGALG00000010609 2765 0.809 - - - - - - - 0.809 - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]
13. GPN3 ENSGALG00000003807 6320 0.807 - - - - - - - 0.807 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
14. TBL1XR1 ENSGALG00000039182 16983 0.805 - - - - - - 0.805 - - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
15. PPFIA1 ENSGALG00000035774 5258 0.804 - - - - - - - 0.804 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
16. TM2D2 ENSGALG00000003356 7088 0.802 - - - - - - - 0.802 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
17. RSF1 ENSGALG00000039068 3438 0.8 - - - - - - - 0.800 - - remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
18. DJ-1 DJ-1 13462 0.799 - - - - - - - 0.799 - -
19. APP ENSGALG00000015770 9438 0.794 - - - - - - - 0.794 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
20. RABGGTB ENSGALG00000011388 11654 0.794 - - - - - - 0.794 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
21. RNF11 ENSGALG00000010539 8617 0.793 - - - - - - - 0.793 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
22. TMEM41A ENSGALG00000006649 3309 0.791 - - - - - - - 0.791 - - transmembrane protein 41A [Source:NCBI gene;Acc:424875]
23. CCDC47 ENSGALG00000000564 6584 0.791 - - - - - - - 0.791 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
24. CCDC88C ENSGALG00000040156 6191 0.79 - - - - - - 0.790 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
25. PPFIBP1 ENSGALG00000014106 9864 0.789 - - - - - - 0.789 - - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
26. ETFA ENSGALG00000002925 24053 0.789 - - - - - - - 0.789 - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
27. GLI3 ENSGALG00000040266 9981 0.789 - - - - - - 0.789 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
28. WSB2 ENSGALG00000008151 13246 0.788 - - - - - - - 0.788 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
29. TMTC2 ENSGALG00000010975 7040 0.786 - - - - - - 0.786 - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
30. EGLN1 ENSGALG00000041422 11032 0.785 - - - - - - 0.785 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
31. ENSGALG00000004283 ENSGALG00000004283 4771 0.784 - - - - - - - 0.784 - -
32. DEGS1 ENSGALG00000009330 3599 0.784 - - - - - - - 0.784 - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
33. TAF2 ENSGALG00000043193 6311 0.783 - - - - - - 0.783 - - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
34. PSMF1 ENSGALG00000000259 5782 0.782 - - - - - - - 0.782 - - proteasome inhibitor subunit 1 [Source:NCBI gene;Acc:430115]
35. EMP2 ENSGALG00000027058 3925 0.781 - - - - - - - 0.781 - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
36. NSMAF ENSGALG00000038838 2221 0.78 - - - - - - - 0.780 - - neutral sphingomyelinase activation associated factor [Source:HGNC Symbol;Acc:HGNC:8017]
37. NFRKB ENSGALG00000001306 4469 0.78 - - - - - - - 0.780 - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
38. COX17 ENSGALG00000014981 5646 0.779 - - - - - - - 0.779 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
39. ZNF76 ENSGALG00000002630 1625 0.779 - - - - - - - 0.779 - - zinc finger protein 76 [Source:HGNC Symbol;Acc:HGNC:13149]
40. MTMR8 ENSGALG00000007590 6022 0.779 - - - - - - 0.779 - - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
41. ERBB2IP ERBB2IP 5800 0.779 - - - - - - 0.779 - - -
42. RNPS1 ENSGALG00000009288 13588 0.778 - - - - - - 0.778 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
43. DNPEP ENSGALG00000011318 10623 0.778 - - - - - - - 0.778 - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
44. CENPO ENSGALG00000016609 1699 0.777 - - - - - - - 0.777 - - centromere protein O [Source:NCBI gene;Acc:422014]
45. ARFIP1 ENSGALG00000041361 7351 0.777 - - - - - - - 0.777 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
46. PTCH1 ENSGALG00000012620 4840 0.777 - - - - - - 0.777 - - - patched 1 [Source:NCBI gene;Acc:395806]
47. DGCR2 ENSGALG00000005891 8405 0.776 - - - - - - 0.776 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
48. TTC37 ENSGALG00000014670 5715 0.776 - - - - - - 0.776 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
49. HDDC2 ENSGALG00000014841 7674 0.775 - - - - - - 0.775 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
50. CSTF3 ENSGALG00000011685 4711 0.774 - - - - - - - 0.774 - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
51. NENF ENSGALG00000009821 4826 0.774 - - - - - - - 0.774 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
52. MRPL53 ENSGALG00000037867 6100 0.772 - - - - - - 0.772 - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
53. ZNF593 ENSGALG00000000542 79105 0.771 - - - - - - 0.771 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
54. CNI CNI 18453 0.771 - - - - - - - 0.771 - -
55. SMDT1 ENSGALG00000011897 9360 0.771 - - - - - - 0.771 - - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
56. TTLL5 ENSGALG00000010340 4875 0.771 - - - - - - - 0.771 - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
57. MRPL47 ENSGALG00000013759 9044 0.77 - - - - - - - 0.770 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
58. UBR2 ENSGALG00000009906 7717 0.77 - - - - - - 0.770 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
59. FAM98A ENSGALG00000010428 9585 0.77 - - - - - - 0.770 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
60. SLC4A1AP ENSGALG00000010047 3171 0.77 - - - - - - 0.770 - - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
61. NTPCR ENSGALG00000011015 8652 0.768 - - - - - - - 0.768 - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
62. DHRS3 ENSGALG00000030376 6422 0.768 - - - - - - 0.768 - - - dehydrogenase/reductase 3 [Source:NCBI gene;Acc:419480]
63. BLOC1S2 ENSGALG00000005794 544 0.768 - - - - - - - 0.768 - - biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
64. TDP2 ENSGALG00000013637 6595 0.768 - - - - - - - 0.768 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
65. GPX8 ENSGALG00000026704 4497 0.767 - - - - - - - 0.767 - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
66. B4GAL-T7 B4GAL-T7 12356 0.765 - - - - - - - 0.765 - -
67. CARHSP1 ENSGALG00000042981 6920 0.765 - - - - - - - 0.765 - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
68. SOX11 ENSGALG00000016397 12144 0.765 - - - - - - 0.765 - - - SRY-box 11 [Source:NCBI gene;Acc:396104]
69. C1orf198 ENSGALG00000026600 5651 0.765 - - - - - - - 0.765 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
70. ADD1 ENSGALG00000015664 6828 0.764 - - - - - - 0.764 - - - adducin 1 [Source:NCBI gene;Acc:422882]
71. MOB3A ENSGALG00000031729 9690 0.764 - - - - - - - 0.764 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
72. MRPL55 5995 0.764 - - - - - - - 0.764 - - mitochondrial ribosomal protein L55
73. KIF2C ENSGALG00000010120 8999 0.764 - - - - - - 0.764 - - - kinesin family member 2C, transcript variant X1
74. gga-mir-7476 gga-mir-7476 20209 0.763 - - - - - - 0.763 - - -
75. C1H12ORF23 C1H12ORF23 13234 0.762 - - - - - - 0.762 - - -
76. PRDX6 ENSGALG00000003053 17928 0.761 - - - - - - - 0.761 - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
77. AIFM1 ENSGALG00000004003 10451 0.761 - - - - - - - 0.761 - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
78. NUP50 ENSGALG00000014222 11743 0.76 - - - - - - 0.760 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
79. DNM1L ENSGALG00000012929 6174 0.759 - - - - - - - 0.759 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
80. PUF60 ENSGALG00000039901 26902 0.759 - - - - - - - 0.759 - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
81. DKC1 ENSGALG00000005054 30350 0.759 - - - - - - 0.759 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
82. EIF2S1 ENSGALG00000009565 63906 0.758 - - - - - - 0.758 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
83. KTN1 ENSGALG00000012137 4058 0.758 - - - - - - - 0.758 - - kinectin 1 [Source:NCBI gene;Acc:396335]
84. CAMK2G ENSGALG00000005088 5037 0.758 - - - - - - 0.758 - - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
85. UBE2V1 ENSGALG00000008015 17947 0.758 - - - - - - 0.758 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
86. CCDC12 ENSGALG00000005487 8190 0.758 - - - - - - 0.758 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
87. BNIP3L ENSGALG00000043405 10316 0.758 - - - - - - - 0.758 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
88. PHACTR4 ENSGALG00000042485 3523 0.757 - - - - - - - 0.757 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
89. ENSGALG00000026802 ENSGALG00000026802 14688 0.756 - - - - - - - 0.756 - -
90. PSMD13 ENSGALG00000043684 14720 0.755 - - - - - - - 0.755 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
91. CRLF3 ENSGALG00000003284 6002 0.755 - - - - - - - 0.755 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
92. PRPF6 ENSGALG00000006001 8572 0.755 - - - - - - - 0.755 - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
93. COPE ENSGALG00000003153 19444 0.755 - - - - - - - 0.755 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
94. PPIL2 ENSGALG00000042052 4349 0.755 - - - - - - - 0.755 - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
95. NUDT7 ENSGALG00000034395 7396 0.754 - - - - - - - 0.754 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
96. FAM63B 3793 0.754 - - - - - - - 0.754 - - family with sequence similarity 63 member B
97. DERL1 ENSGALG00000033950 15074 0.754 - - - - - - 0.754 - - - derlin 1 [Source:NCBI gene;Acc:420350]
98. RPE ENSGALG00000002847 7644 0.754 - - - - - - - 0.754 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
99. PCBP4 ENSGALG00000027695 7937 0.754 - - - - - - - 0.754 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
100. STRN3 ENSGALG00000040464 9045 0.754 - - - - - - - 0.754 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA