Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for YIPF3

Gene Name Gene ID Reads Annotation
YIPF3 ENSGALG00000041037 6126 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]











Genes with expression patterns similar to YIPF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YIPF3 ENSGALG00000041037 6126 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
2. NEO1 ENSGALG00000001774 10165 1.727 - - - - - - - 0.851 - 0.876 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
3. STX2 ENSGALG00000002536 10438 1.688 - - - - - - - 0.809 - 0.879 syntaxin 2 [Source:NCBI gene;Acc:378895]
4. RAB20 ENSGALG00000016844 3250 1.645 - - - - - - - 0.864 - 0.781 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
5. AGPS ENSGALG00000009236 2250 1.638 - - - - - - 0.747 - - 0.891 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
6. POLR1B ENSGALG00000032273 3845 1.636 - - - - - - 0.762 - - 0.874 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
7. ARHGAP21 ENSGALG00000007721 3961 1.634 - - - - - - 0.719 - - 0.915 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
8. HOTAIRM1 HOTAIRM1 4335 1.631 - - - - - - 0.722 - - 0.909
9. SPG21 ENSGALG00000007262 8050 1.631 - - - - - - 0.809 - - 0.822 SPG21, maspardin [Source:NCBI gene;Acc:415526]
10. MB21D1 2460 1.627 - - - - - - 0.707 - - 0.920 Mab-21 domain containing 1
11. UCHL3 ENSGALG00000016921 16208 1.611 - - - - - - 0.716 - - 0.895 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
12. MED24 ENSGALG00000013506 5403 1.611 - - - - - - 0.710 - - 0.901 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
13. GXYLT1 ENSGALG00000009532 5682 1.588 - - - - - - 0.710 - - 0.878 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
14. ARL13B ENSGALG00000015412 2968 1.584 - - - - - - 0.717 - - 0.867 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
15. LOC426385 ENSGALG00000026301 2703 1.578 - - - - - - 0.705 - - 0.873 serine/threonine kinase 35-like, transcript variant X2
16. COL5A2 ENSGALG00000031112 18358 1.574 - - - - - - 0.714 - - 0.860 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
17. PDE3B ENSGALG00000006035 3732 1.537 - - - - - - 0.710 - - 0.827 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
18. PSPC1 ENSGALG00000017142 13036 1.534 - - - - - - 0.812 - - 0.722 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
19. CHRAC1 ENSGALG00000040823 5695 1.527 - - - - - - 0.715 - - 0.812 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
20. TMEM167A ENSGALG00000027332 13862 1.517 - - - - - - 0.743 0.774 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
21. C17H9ORF16 C17H9ORF16 7908 1.515 - - - - - - 0.738 0.777 - -
22. DGCR2 ENSGALG00000005891 8405 1.505 - - - - - - 0.704 - - 0.801 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
23. RAB10 ENSGALG00000016535 5272 1.502 - - - - - - 0.717 - - 0.785 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
24. CSE1L ENSGALG00000004707 20653 1.491 - - - - - - 0.738 0.753 - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
25. SPEN ENSGALG00000036932 9688 1.483 - - - - - - 0.725 0.758 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
26. RPF2 ENSGALG00000037087 12788 1.478 - - - - - - 0.750 - - 0.728 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
27. SYNE2 ENSGALG00000011811 5542 1.456 - - - - - - 0.707 - - 0.749 spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
28. HSPA4 ENSGALG00000040882 20966 1.442 - - - - - - 0.720 - - 0.722 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
29. ANKHD1 ENSGALG00000001099 10103 1.434 - - - - - - 0.730 - - 0.704 ankyrin repeat and KH domain containing 1 [Source:NCBI gene;Acc:416143]
30. FASTKD3 ENSGALG00000033521 1186 0.937 - - - - - - - - - 0.937 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
31. COG5 ENSGALG00000042764 4205 0.935 - - - - - - - - - 0.935 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
32. FOCAD ENSGALG00000015071 3677 0.934 - - - - - - - - - 0.934 focadhesin [Source:NCBI gene;Acc:427233]
33. C26H6ORF89 C26H6ORF89 1826 0.932 - - - - - - - - - 0.932
34. STRADA ENSGALG00000000550 6912 0.931 - - - - - - - - - 0.931 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
35. MCFD2 ENSGALG00000010017 8905 0.931 - - - - - - - 0.931 - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
36. MRPL50 ENSGALG00000015543 11649 0.93 - - - - - - - - - 0.930 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
37. PTX3 ENSGALG00000028284 2984 0.93 - - - - - - - - - 0.930 pentraxin 3 [Source:NCBI gene;Acc:548626]
38. ARPC1B ENSGALG00000032588 2407 0.929 - - - - - - - - - 0.929 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
39. CRYM ENSGALG00000002484 3558 0.929 - - - - - - - - - 0.929 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
40. LRRN4 ENSGALG00000008815 481 0.928 - - - - - - - - - 0.928 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
41. LPCAT2 ENSGALG00000003574 893 0.927 - - - - - - - - - 0.927 lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
42. ENSGALG00000005389 ENSGALG00000005389 553 0.927 - - - - - - - - - 0.927
43. PROM1 ENSGALG00000014496 2494 0.927 - - - - - - - - - 0.927 prominin 1 [Source:NCBI gene;Acc:422825]
44. CABLES1 ENSGALG00000014998 1636 0.926 - - - - - - - - - 0.926 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
45. APBA3 ENSGALG00000000740 1249 0.925 - - - - - - - - - 0.925 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
46. PCLO 249 0.925 - - - - - - - - - 0.925 piccolo presynaptic cytomatrix protein
47. FAM190B FAM190B 165 0.925 - - - - - - - - - 0.925
48. IL10R2 IL10R2 72 0.925 - - - - - - - - - 0.925
49. CPNE2 ENSGALG00000001316 236 0.925 - - - - - - - - - 0.925 copine 2 [Source:NCBI gene;Acc:415646]
50. 5S_2 5S_2 58 0.924 - - - - - - - - - 0.924
51. SOX6 ENSGALG00000006074 102 0.924 - - - - - - - - - 0.924 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
52. KLHL7 ENSGALG00000010938 528 0.923 - - - - - - - - - 0.923 kelch like family member 7 [Source:NCBI gene;Acc:420612]
53. ZNF6 ZNF6 138 0.923 - - - - - - - - - 0.923
54. GRTP1 ENSGALG00000016828 3145 0.923 - - - - - - - - - 0.923 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
55. CCNE2 ENSGALG00000040794 1229 0.922 - - - - - - - - - 0.922 cyclin E2 [Source:NCBI gene;Acc:420231]
56. SPDL1 ENSGALG00000001942 4403 0.922 - - - - - - - - - 0.922 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
57. CXADR ENSGALG00000015701 96 0.922 - - - - - - - - - 0.922 coxsackie virus and adenovirus receptor, transcript variant X2
58. AGGF1 ENSGALG00000004311 3011 0.922 - - - - - - - - - 0.922 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
59. ACADL ENSGALG00000002891 8058 0.922 - - - - - - - - - 0.922 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
60. GGA.31975 GGA.31975 8825 0.921 - - - - - - - - - 0.921
61. ITSN2 ENSGALG00000016504 651 0.921 - - - - - - - - - 0.921 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
62. CCDC51 ENSGALG00000006465 1845 0.921 - - - - - - - - - 0.921 coiled-coil domain containing 51, transcript variant X1
63. SLC39A13 ENSGALG00000008122 2003 0.921 - - - - - - - - - 0.921 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
64. CRCP ENSGALG00000002587 8809 0.921 - - - - - - - - - 0.921 CGRP receptor component [Source:NCBI gene;Acc:396022]
65. LRRC59 ENSGALG00000007673 2081 0.92 - - - - - - - 0.920 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
66. TBC1D19 ENSGALG00000029673 1868 0.919 - - - - - - - - - 0.919 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. C14orf80 C14orf80 1921 0.919 - - - - - - - - - 0.919
68. RER1 ENSGALG00000021683 9074 0.919 - - - - - - - - - 0.919 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
69. SGSH ENSGALG00000007027 1115 0.919 - - - - - - - - - 0.919 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
70. SSH1 ENSGALG00000004928 222 0.918 - - - - - - - - - 0.918 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
71. CDKN2AIP ENSGALG00000010661 1218 0.917 - - - - - - - - - 0.917 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
72. CDH1-A CDH1-A 343 0.917 - - - - - - - - - 0.917
73. PM20D2 ENSGALG00000015779 1301 0.917 - - - - - - - - - 0.917 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
74. CASKIN1 604 0.917 - - - - - - - - - 0.917 CASK interacting protein 1, transcript variant X4
75. CPT2 ENSGALG00000010681 3211 0.917 - - - - - - - - - 0.917 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
76. MTSS1 ENSGALG00000041969 1312 0.917 - - - - - - - - - 0.917 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
77. SLC2A3 SLC2A3 527 0.916 - - - - - - - - - 0.916
78. ZFR ENSGALG00000003235 8466 0.916 - - - - - - - - - 0.916 zinc finger RNA binding protein, transcript variant X3
79. LAMP2 ENSGALG00000008572 198 0.915 - - - - - - - - - 0.915 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
80. MGA 1911 0.915 - - - - - - - - - 0.915 MGA, MAX dimerization protein, transcript variant X15
81. ENSGALG00000009044 ENSGALG00000009044 14492 0.914 - - - - - - - - - 0.914
82. AURKA ENSGALG00000007768 793 0.914 - - - - - - - - - 0.914 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
83. 5 5 4209 0.914 - - - - - - - - - 0.914
84. WDSUB1 ENSGALG00000012574 2038 0.914 - - - - - - - - - 0.914 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
85. GRK4 ENSGALG00000015645 1065 0.914 - - - - - - - - - 0.914 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
86. PREX2 ENSGALG00000042354 134 0.913 - - - - - - - - - 0.913 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
87. WHSC1 1712 0.913 - - - - - - - - - 0.913 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
88. HAUS8 ENSGALG00000003727 351 0.913 - - - - - - - - - 0.913 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
89. NCAPG2 ENSGALG00000006525 2319 0.912 - - - - - - - - - 0.912 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
90. MYOCD ENSGALG00000001021 351 0.912 - - - - - - - - - 0.912 myocardin [Source:NCBI gene;Acc:427790]
91. FAM129A ENSGALG00000004812 269 0.912 - - - - - - - - - 0.912 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
92. NARS ENSGALG00000040506 9506 0.912 - - - - - - - - - 0.912 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
93. CACHD1 ENSGALG00000011024 2036 0.911 - - - - - - - - - 0.911 cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
94. DIAPH3 ENSGALG00000016937 1069 0.911 - - - - - - - - - 0.911 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
95. PPFIA1 ENSGALG00000035774 5258 0.911 - - - - - - - - - 0.911 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
96. ITGA9 ENSGALG00000029378 415 0.911 - - - - - - - - - 0.911 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
97. IDS ENSGALG00000009154 1177 0.91 - - - - - - - - - 0.910 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
98. TMEM68 ENSGALG00000031835 1691 0.91 - - - - - - - - - 0.910 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
99. TXNDC11 ENSGALG00000003154 2224 0.91 - - - - - - - - - 0.910 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
100. INTS10 ENSGALG00000010130 6320 0.91 - - - - - - - - - 0.910 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]

There are 675 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA