Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for YARS

Gene Name Gene ID Reads Annotation
YARS ENSGALG00000003563 11093 tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]











Genes with expression patterns similar to YARS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YARS ENSGALG00000003563 11093 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
2. PRDM4 ENSGALG00000012619 876 1.897 - - - 0.900 0.997 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
3. ENSGALG00000006569 ENSGALG00000006569 2169 1.866 - - - - 0.993 - - 0.873 - -
4. TRIM62 ENSGALG00000028437 5124 1.826 - - - 0.925 - - - 0.901 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
5. PHTF1 ENSGALG00000001845 3276 1.825 - - - 0.831 0.994 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
6. MED8 ENSGALG00000009993 3095 1.813 - - - 0.816 0.997 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
7. ZYX ENSGALG00000014688 8686 1.781 - - - - 0.961 - - 0.820 - - zyxin [Source:NCBI gene;Acc:418300]
8. TM9SF3 ENSGALG00000005534 15290 1.774 - - - 0.822 0.952 - - - - - transmembrane 9 superfamily member 3
9. PITHD1 ENSGALG00000003986 11470 1.752 - - - 0.758 0.994 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
10. TIMMDC1 ENSGALG00000024480 9337 1.71 - - - 0.723 0.987 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
11. PRKCI ENSGALG00000009364 11574 1.691 - - - 0.730 0.961 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
12. NEK7 ENSGALG00000002216 4532 1.664 - - - 0.872 - - - 0.792 - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
13. RPL22 ENSGALG00000000719 74238 1.651 - - - 0.711 0.940 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
14. HDHD3 ENSGALG00000044101 6333 1.646 - - - 0.827 - - - 0.819 - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
15. RANBP10 ENSGALG00000001439 4003 1.643 - - - 0.735 - - - 0.908 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
16. UMPS ENSGALG00000011770 11331 1.641 - - - 0.755 0.886 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
17. RNF8 ENSGALG00000023256 5495 1.628 - - - 0.816 - - - 0.812 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
18. TRIM33 ENSGALG00000001976 7404 1.622 - - - 0.773 - - - 0.849 - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
19. POLR2E ENSGALG00000002591 26405 1.616 - - - - 0.879 0.737 - - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
20. UQCRH ENSGALG00000017380 55734 1.589 - - - - 0.871 - 0.718 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
21. ZNF622 ENSGALG00000037171 5706 1.57 - - - 0.749 - - 0.821 - - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
22. ATG16L1 ENSGALG00000001619 3562 1.536 - - - 0.785 0.751 - - - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
23. ENSGALG00000027884 ENSGALG00000027884 20249 1.529 - - - 0.826 - - 0.703 - - -
24. WBP1L ENSGALG00000041010 3681 1.522 - - - - - - 0.744 0.778 - - WW domain binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:23510]
25. C1H2ORF49 ENSGALG00000016796 2976 1.509 - - - 0.725 - - - 0.784 - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
26. ENSGALG00000005727 ENSGALG00000005727 4334 1.507 - - - - - - - 0.794 0.713 -
27. HS2ST1 ENSGALG00000028423 4153 1.505 - - - 0.723 - - - 0.782 - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
28. ADAT2 ENSGALG00000019976 4169 1.499 - - - 0.724 - - - 0.775 - - adenosine deaminase, tRNA specific 2
29. SIPA1L1 ENSGALG00000009381 4019 1.464 - - - 0.710 - - 0.754 - - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
30. SDCBP ENSGALG00000015436 1228 0.998 - - - - 0.998 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
31. PREP2 PREP2 238 0.998 - - - - 0.998 - - - - -
32. SMG7 ENSGALG00000004667 707 0.997 - - - - 0.997 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
33. RAMP3 ENSGALG00000037246 1187 0.997 - - - - 0.997 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
34. ANKRD9 ENSGALG00000011376 525 0.997 - - - - 0.997 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
35. RBM6 ENSGALG00000035578 1690 0.996 - - - - 0.996 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
36. BRF1 ENSGALG00000011705 3406 0.996 - - - - 0.996 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
37. PTK2B ENSGALG00000016564 406 0.996 - - - - 0.996 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
38. GTF2H1 ENSGALG00000042340 1553 0.996 - - - - 0.996 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
39. LZIC ENSGALG00000002616 9052 0.995 - - - - 0.995 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
40. ASAP2 ENSGALG00000016419 1393 0.995 - - - - 0.995 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
41. TMF1 ENSGALG00000013408 3344 0.994 - - - - 0.994 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
42. SAP30 ENSGALG00000036252 2032 0.994 - - - - 0.994 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
43. ETS1 ENSGALG00000001143 7284 0.994 - - - - 0.994 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
44. NDUFV1 ENSGALG00000042809 6222 0.994 - - - - 0.994 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
45. SYNE1 ENSGALG00000013505 2324 0.994 - - - - 0.994 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
46. SNX14 ENSGALG00000015831 2554 0.993 - - - - 0.993 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
47. KIF11 ENSGALG00000030597 5528 0.992 - - - - 0.992 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
48. MRPL16 ENSGALG00000029419 8033 0.992 - - - - 0.992 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
49. STARD3NL ENSGALG00000033038 4851 0.991 - - - - 0.991 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
50. EDNRA ENSGALG00000010013 2472 0.991 - - - - 0.991 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
51. RBM34 ENSGALG00000029915 5618 0.991 - - - - 0.991 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
52. BAHD1 ENSGALG00000033675 1779 0.991 - - - - 0.991 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
53. RALGDS ENSGALG00000003412 4478 0.991 - - - - 0.991 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
54. RAD54B ENSGALG00000043597 1699 0.99 - - - - 0.990 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
55. HSF2 ENSGALG00000038420 5259 0.99 - - - - 0.990 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
56. TSPO2 ENSGALG00000003212 5141 0.989 - - - - 0.989 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
57. C9orf85 ENSGALG00000026001 4110 0.989 - - - - 0.989 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
58. IARS2 ENSGALG00000009566 4599 0.989 - - - - 0.989 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
59. COQ5 ENSGALG00000007185 5614 0.989 - - - - 0.989 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
60. FNDC5 ENSGALG00000003567 3328 0.989 - - - - 0.989 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
61. DGKZ ENSGALG00000008380 5389 0.989 - - - - 0.989 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
62. DLL1 ENSGALG00000011182 1613 0.988 - - - - 0.988 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
63. WDR92 ENSGALG00000008760 3934 0.988 - - - - 0.988 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
64. LOC426385 ENSGALG00000026301 2703 0.987 - - - - 0.987 - - - - - serine/threonine kinase 35-like, transcript variant X2
65. MED21 ENSGALG00000027435 5766 0.987 - - - - 0.987 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
66. MEF2BNB MEF2BNB 5578 0.987 - - - - 0.987 - - - - -
67. CDKN1B ENSGALG00000022980 4606 0.986 - - - - 0.986 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
68. ENSGALG00000027854 ENSGALG00000027854 5007 0.986 - - - - 0.986 - - - - -
69. LMAN2 ENSGALG00000033232 11740 0.985 - - - - 0.985 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
70. MARC1 ENSGALG00000009453 5675 0.985 - - - - 0.985 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
71. UTP6 ENSGALG00000003260 4909 0.984 - - - - 0.984 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
72. SFXN5 ENSGALG00000016094 2678 0.983 - - - - 0.983 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
73. PBRM1 ENSGALG00000037455 6450 0.982 - - - - 0.982 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
74. HARS ENSGALG00000035080 11602 0.981 - - - - 0.981 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
75. PSMG3 ENSGALG00000004203 11240 0.981 - - - - 0.981 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
76. WNK2 ENSGALG00000038850 4712 0.981 - - - - 0.981 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
77. CDH3 5050 0.98 - - - - 0.980 - - - - - cadherin 3
78. SH3BGR ENSGALG00000016127 2561 0.979 - - - - 0.979 - - - - - SH3 domain binding glutamate rich protein
79. MYBL2 ENSGALG00000003503 15875 0.977 - - - - 0.977 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
80. UPF3B ENSGALG00000008618 12350 0.977 - - - - 0.977 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
81. FUNDC2 ENSGALG00000029585 9334 0.977 - - - - 0.977 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
82. RHOT1 ENSGALG00000003397 5149 0.976 - - - - 0.976 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
83. CCDC132 CCDC132 2632 0.975 - - - - 0.975 - - - - -
84. CDCA7 ENSGALG00000040833 7484 0.974 - - - - 0.974 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
85. DLD ENSGALG00000007931 11011 0.974 - - - - 0.974 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
86. ACAT2 ENSGALG00000011659 12825 0.973 - - - - 0.973 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
87. NEK6 ENSGALG00000001118 20333 0.972 - - - - 0.972 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
88. PSMD3 ENSGALG00000033162 25615 0.972 - - - - 0.972 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
89. SLMO2 SLMO2 9207 0.972 - - - - 0.972 - - - - -
90. LGMN ENSGALG00000010811 7401 0.972 - - - - 0.972 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
91. SPRED1 ENSGALG00000028203 6520 0.971 - - - - 0.971 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
92. LGALS1 ENSGALG00000012420 13993 0.971 - - - - 0.971 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
93. DENR ENSGALG00000003795 30805 0.97 - - - - 0.970 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
94. GATC ENSGALG00000007195 8610 0.97 - - - - 0.970 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
95. MYO9A ENSGALG00000033618 4505 0.97 - - - - 0.970 - - - - - myosin IXA, transcript variant X10
96. NUP88 ENSGALG00000032280 9847 0.968 - - - - 0.968 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
97. PRCC ENSGALG00000040696 9346 0.968 - - - - 0.968 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
98. SLC30A4 ENSGALG00000005703 5696 0.967 - - - - 0.967 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
99. SPEN ENSGALG00000036932 9688 0.967 - - - - 0.967 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
100. TAF3 ENSGALG00000006731 15569 0.965 - - - - 0.965 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]

There are 631 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA