Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Xrn1

Gene Name Gene ID Reads Annotation
Xrn1 ENSMUSG00000032410 667 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]







Genes with expression patterns similar to Xrn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Xrn1 ENSMUSG00000032410 667 6 1.000 1.000 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
2. Mcmdc2 ENSMUSG00000046101 117 0.956 - 0.956 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
3. BC027582 BC027582 61 0.954 - 0.954 - - - -
4. Celf3 ENSMUSG00000028137 141 0.954 - 0.954 - - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
5. Gm15954 Gm15954 49 0.952 - 0.952 - - - -
6. Stim1 ENSMUSG00000030987 220 0.952 - 0.952 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
7. Ank1 ENSMUSG00000031543 443 0.952 - 0.952 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]
8. Eef1a2 ENSMUSG00000016349 41 0.952 - 0.952 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
9. Ctla2b ENSMUSG00000074874 66 0.951 - 0.951 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
10. Gm26869 ENSMUSG00000097879 104 0.951 - 0.951 - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
11. Ccr5 ENSMUSG00000079227 87 0.949 - 0.949 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
12. Pld1 ENSMUSG00000027695 229 0.949 - 0.949 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
13. Stc2 ENSMUSG00000020303 138 0.948 - 0.948 - - - - stanniocalcin 2 [Source:MGI Symbol;Acc:MGI:1316731]
14. Snora23 ENSMUSG00000064451 53 0.948 - 0.948 - - - - small nucleolar RNA, H/ACA box 23 [Source:MGI Symbol;Acc:MGI:3819494]
15. Mettl7a3 ENSMUSG00000058057 214 0.947 - 0.947 - - - - methyltransferase like 7A3 [Source:MGI Symbol;Acc:MGI:3710670]
16. Emc1 ENSMUSG00000078517 293 0.946 - 0.946 - - - - ER membrane protein complex subunit 1 [Source:MGI Symbol;Acc:MGI:2443696]
17. Cgrrf1 ENSMUSG00000055128 994 0.942 - 0.942 - - - - cell growth regulator with ring finger domain 1 [Source:MGI Symbol;Acc:MGI:1916368]
18. Rep15 ENSMUSG00000040121 131 0.942 - 0.942 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
19. Gm13422 ENSMUSG00000084098 313 0.942 - 0.942 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
20. Ninj1 ENSMUSG00000037966 493 0.942 - 0.942 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
21. Pls1 ENSMUSG00000049493 175 0.941 - 0.941 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
22. Gm11539 ENSMUSG00000083337 746 0.941 - 0.941 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
23. Abhd5 ENSMUSG00000032540 461 0.941 - 0.941 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
24. Gm14227 ENSMUSG00000082596 93 0.94 - 0.940 - - - - predicted gene 14227 [Source:MGI Symbol;Acc:MGI:3649437]
25. Golph3l ENSMUSG00000046519 687 0.94 - 0.940 - - - - golgi phosphoprotein 3-like [Source:MGI Symbol;Acc:MGI:1917129]
26. Gm13033 ENSMUSG00000083816 71 0.939 - 0.939 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
27. Tmsb15b1 ENSMUSG00000089768 199 0.938 - 0.938 - - - - thymosin beta 15b1 [Source:MGI Symbol;Acc:MGI:3843059]
28. Leprotl1 ENSMUSG00000031513 1832 0.938 - 0.938 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
29. Ercc6 ENSMUSG00000054051 674 0.936 - 0.936 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]
30. Khnyn ENSMUSG00000047153 196 0.936 - 0.936 - - - - KH and NYN domain containing [Source:MGI Symbol;Acc:MGI:2451333]
31. Bod1l ENSMUSG00000061755 2689 0.935 - 0.935 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
32. Wwc1 ENSMUSG00000018849 410 0.935 - 0.935 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
33. Thsd1 ENSMUSG00000031480 416 0.934 - 0.934 - - - - thrombospondin, type I, domain 1 [Source:MGI Symbol;Acc:MGI:1929096]
34. Afmid ENSMUSG00000017718 252 0.933 - 0.933 - - - - arylformamidase [Source:MGI Symbol;Acc:MGI:2448704]
35. Mlycd ENSMUSG00000074064 268 0.932 - 0.932 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
36. Dusp23 ENSMUSG00000026544 310 0.932 - 0.932 - - - - dual specificity phosphatase 23 [Source:MGI Symbol;Acc:MGI:1915690]
37. Nif3l1 ENSMUSG00000026036 1546 0.932 - 0.932 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
38. Mtmr3 ENSMUSG00000034354 1240 0.931 - 0.931 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
39. Trip10 ENSMUSG00000019487 485 0.931 - 0.931 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
40. Zfp445 ENSMUSG00000047036 205 0.93 - 0.930 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
41. Trmt10c ENSMUSG00000044763 662 0.93 - 0.930 - - - - tRNA methyltransferase 10C [Source:MGI Symbol;Acc:MGI:1196261]
42. Zfp551 ENSMUSG00000034071 101 0.927 - 0.927 - - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
43. Gm16287 ENSMUSG00000073739 273 0.927 - 0.927 - - - - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
44. Nol9 ENSMUSG00000028948 3331 0.927 - 0.927 - - - - nucleolar protein 9 [Source:MGI Symbol;Acc:MGI:1921285]
45. St3gal6 ENSMUSG00000022747 332 0.926 - 0.926 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:1888707]
46. Rnasel ENSMUSG00000066800 396 0.925 - 0.925 - - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
47. Hist1h4i ENSMUSG00000060639 582 0.925 - 0.925 - - - - histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
48. Snx5 ENSMUSG00000027423 3464 0.924 - 0.924 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
49. Ndst2 ENSMUSG00000039308 402 0.924 - 0.924 - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:MGI Symbol;Acc:MGI:97040]
50. Mcu ENSMUSG00000009647 477 0.924 - 0.924 - - - - mitochondrial calcium uniporter [Source:MGI Symbol;Acc:MGI:3026965]
51. Hexdc ENSMUSG00000039307 420 0.919 - 0.919 - - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:MGI Symbol;Acc:MGI:3605542]
52. Ankrd44 ENSMUSG00000052331 984 0.918 - 0.918 - - - - ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]
53. Tmem159 ENSMUSG00000030917 409 0.918 - 0.918 - - - - transmembrane protein 159 [Source:MGI Symbol;Acc:MGI:1925752]
54. Phf12 ENSMUSG00000037791 554 0.917 - 0.917 - - - - PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
55. Lad1 ENSMUSG00000041782 339 0.917 - 0.917 - - - - ladinin [Source:MGI Symbol;Acc:MGI:109343]
56. Ankrd13c ENSMUSG00000039988 429 0.916 - 0.916 - - - - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
57. Creld1 ENSMUSG00000030284 502 0.916 - 0.916 - - - - cysteine-rich with EGF-like domains 1 [Source:MGI Symbol;Acc:MGI:2152539]
58. B3gntl1 ENSMUSG00000046605 165 0.916 - 0.916 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:MGI Symbol;Acc:MGI:2441705]
59. Tmem127 ENSMUSG00000034850 691 0.915 - 0.915 - - - - transmembrane protein 127 [Source:MGI Symbol;Acc:MGI:1916720]
60. Dlx2 ENSMUSG00000023391 429 0.914 - 0.914 - - - - distal-less homeobox 2 [Source:MGI Symbol;Acc:MGI:94902]
61. Il10rb ENSMUSG00000022969 176 0.912 - 0.912 - - - - interleukin 10 receptor, beta [Source:MGI Symbol;Acc:MGI:109380]
62. Sirt4 ENSMUSG00000029524 437 0.912 - 0.912 - - - - sirtuin 4 [Source:MGI Symbol;Acc:MGI:1922637]
63. Ndel1 ENSMUSG00000018736 3400 0.911 - 0.911 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
64. Pnpla8 ENSMUSG00000036257 649 0.91 - 0.910 - - - - patatin-like phospholipase domain containing 8 [Source:MGI Symbol;Acc:MGI:1914702]
65. Ccbl1 Ccbl1 330 0.91 - 0.910 - - - -
66. Ficd ENSMUSG00000053334 130 0.909 - 0.909 - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
67. Vat1l ENSMUSG00000046844 448 0.908 - 0.908 - - - - vesicle amine transport protein 1 like [Source:MGI Symbol;Acc:MGI:2142534]
68. Fam101b 1093 0.908 - 0.908 - - - - family with sequence similarity 101, member B
69. Upk1a ENSMUSG00000006313 293 0.908 - 0.908 - - - - uroplakin 1A [Source:MGI Symbol;Acc:MGI:98911]
70. Psmd12 ENSMUSG00000020720 2897 0.908 - 0.908 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:MGI Symbol;Acc:MGI:1914247]
71. Upf3a ENSMUSG00000038398 402 0.907 - 0.907 - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
72. Prdm11 ENSMUSG00000075028 678 0.907 - 0.907 - - - - PR domain containing 11 [Source:MGI Symbol;Acc:MGI:2685553]
73. Fxr1 ENSMUSG00000027680 2134 0.907 - 0.907 - - - - fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]
74. Mpp1 ENSMUSG00000031402 1112 0.907 - 0.907 - - - - membrane protein, palmitoylated [Source:MGI Symbol;Acc:MGI:105941]
75. Lman2l ENSMUSG00000001143 1103 0.906 - 0.906 - - - - lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
76. Ntn3 661 0.906 - 0.906 - - - - netrin 3
77. Wdr60 ENSMUSG00000042050 672 0.906 - 0.906 - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
78. Senp3 ENSMUSG00000005204 505 0.905 - 0.905 - - - - SUMO/sentrin specific peptidase 3 [Source:MGI Symbol;Acc:MGI:2158736]
79. Plekhm3 ENSMUSG00000051344 627 0.905 - 0.905 - - - - pleckstrin homology domain containing, family M, member 3 [Source:MGI Symbol;Acc:MGI:2443627]
80. Alg8 ENSMUSG00000035704 1502 0.904 - 0.904 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
81. Gm10068 Gm10068 399 0.903 - 0.903 - - - -
82. Ldoc1l 651 0.903 - 0.903 - - - - leucine zipper, down-regulated in cancer 1-like
83. Smad7 ENSMUSG00000025880 384 0.903 - 0.903 - - - - SMAD family member 7 [Source:MGI Symbol;Acc:MGI:1100518]
84. Tcfl5 ENSMUSG00000038932 151 0.903 - 0.903 - - - - transcription factor-like 5 (basic helix-loop-helix) [Source:MGI Symbol;Acc:MGI:2672878]
85. Gm6415 Gm6415 635 0.902 - 0.902 - - - -
86. Mgst3 ENSMUSG00000026688 519 0.901 - 0.901 - - - - microsomal glutathione S-transferase 3 [Source:MGI Symbol;Acc:MGI:1913697]
87. Igsf10 ENSMUSG00000036334 133 0.901 - 0.901 - - - - immunoglobulin superfamily, member 10 [Source:MGI Symbol;Acc:MGI:1923481]
88. Adat2 ENSMUSG00000019808 408 0.899 - 0.899 - - - - adenosine deaminase, tRNA-specific 2 [Source:MGI Symbol;Acc:MGI:1914007]
89. Scamp2 ENSMUSG00000040188 1163 0.899 - 0.899 - - - - secretory carrier membrane protein 2 [Source:MGI Symbol;Acc:MGI:1346518]
90. R3hcc1l ENSMUSG00000025184 576 0.899 - 0.899 - - - - R3H domain and coiled-coil containing 1 like [Source:MGI Symbol;Acc:MGI:1196316]
91. AI987944 ENSMUSG00000056383 1199 0.899 - 0.899 - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
92. Gm129 Gm129 468 0.899 - 0.899 - - - -
93. Nup43 ENSMUSG00000040034, ENSMUSG00000116037 1278 0.897 - 0.897 - - - - nucleoporin 43 [Source:MGI Symbol;Acc:MGI:1917162]
94. Eddm3b ENSMUSG00000072575 9 0.896 - - - - - 0.896 epididymal protein 3B [Source:MGI Symbol;Acc:MGI:2684921]
95. 4933435F18Rik ENSMUSG00000086978 6 0.896 - - - - - 0.896 RIKEN cDNA 4933435F18 gene [Source:MGI Symbol;Acc:MGI:1918570]
96. Tmem154 ENSMUSG00000056498 9 0.896 - - - - - 0.896 transmembrane protein 154 [Source:MGI Symbol;Acc:MGI:2444725]
97. Xrra1 ENSMUSG00000035211 7 0.895 - - - - - 0.895 X-ray radiation resistance associated 1 [Source:MGI Symbol;Acc:MGI:2181647]
98. Gm4604 70 0.893 - - - - - 0.893 predicted gene 4604
99. Sapcd1 ENSMUSG00000036185 21 0.893 - - - - - 0.893 suppressor APC domain containing 1 [Source:MGI Symbol;Acc:MGI:2388100]
100. C77370 161 0.892 - - - - - 0.892 expressed sequence C77370, transcript variant X2

There are 279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA