Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Xist

Gene Name Gene ID Reads Annotation
Xist ENSMUSG00000086503 4896 inactive X specific transcripts [Source:MGI Symbol;Acc:MGI:98974]







Genes with expression patterns similar to Xist

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Xist ENSMUSG00000086503 4896 6 1.000 1.000 1.000 1.000 1.000 1.000 inactive X specific transcripts [Source:MGI Symbol;Acc:MGI:98974]
2. Slc22a2 ENSMUSG00000040966 4 1 - - - - - 1.000 solute carrier family 22 (organic cation transporter), member 2 [Source:MGI Symbol;Acc:MGI:1335072]
3. 9330175E14Rik ENSMUSG00000097194 2 1 - - - - - 1.000 RIKEN cDNA 9330175E14 gene [Source:MGI Symbol;Acc:MGI:2443913]
4. Olfr859 ENSMUSG00000095448 1 1 - - - - - 1.000 olfactory receptor 859 [Source:MGI Symbol;Acc:MGI:3030693]
5. Gm13044 Gm13044 6 1 - - - - - 1.000
6. Gm11260 ENSMUSG00000082351 1 1 - - - - - 1.000 predicted gene 11260 [Source:MGI Symbol;Acc:MGI:3651928]
7. Osgin1 ENSMUSG00000074063 26 1 - - - - - 1.000 oxidative stress induced growth inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919089]
8. 4930548H24Rik ENSMUSG00000029138 3 1 - - - - - 1.000 RIKEN cDNA 4930548H24 gene [Source:MGI Symbol;Acc:MGI:1914906]
9. Bmp5 ENSMUSG00000032179 12 1 - - - - - 1.000 bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
10. Prl2c1 ENSMUSG00000062551 9 1 - - - - - 1.000 Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
11. Sspo ENSMUSG00000029797 15 1 - - - - - 1.000 SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]
12. Gm12412 ENSMUSG00000083685 7 1 - - - - - 1.000 predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
13. Gm10222 ENSMUSG00000067736 16 1 - - - - - 1.000 predicted gene 10222 [Source:MGI Symbol;Acc:MGI:3642643]
14. Gm12123 ENSMUSG00000082309 1 1 - - - - - 1.000 predicted gene 12123 [Source:MGI Symbol;Acc:MGI:3652210]
15. Rps12-ps3 ENSMUSG00000067038 9 1 - - - - - 1.000 ribosomal protein S12, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704503]
16. Gm16298 ENSMUSG00000089807 1 1 - - - - - 1.000 predicted gene 16298 [Source:MGI Symbol;Acc:MGI:3826538]
17. Gm10712 Gm10712 12 1 - - - - - 1.000
18. Gm11251 ENSMUSG00000084162 7 1 - - - - - 1.000 predicted gene 11251 [Source:MGI Symbol;Acc:MGI:3651054]
19. Mnda 5 1 - - - - - 1.000 myeloid cell nuclear differentiation antigen, transcript variant X1
20. Ryr3 ENSMUSG00000057378 13 1 - - - - - 1.000 ryanodine receptor 3 [Source:MGI Symbol;Acc:MGI:99684]
21. Krt17 ENSMUSG00000035557 15 1 - - - - - 1.000 keratin 17 [Source:MGI Symbol;Acc:MGI:96691]
22. Etnppl ENSMUSG00000019232 3 1 - - - - - 1.000 ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
23. Acsm3 ENSMUSG00000030935 8 1 - - - - - 1.000 acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
24. Rab37 ENSMUSG00000020732 21 0.952 - - - - - 0.952 RAB37, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1929945]
25. Gm25188 ENSMUSG00000065847 6 0.933 - - - - - 0.933 predicted gene, 25188 [Source:MGI Symbol;Acc:MGI:5454965]
26. Gm11713 ENSMUSG00000085245 5 0.933 - - - - - 0.933 predicted gene 11713 [Source:MGI Symbol;Acc:MGI:3652139]
27. Gm13657 ENSMUSG00000086813 15 0.921 - - - - - 0.921 predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
28. 4933406C10Rik ENSMUSG00000097494 9 0.895 - - - - - 0.895 RIKEN cDNA 4933406C10 gene [Source:MGI Symbol;Acc:MGI:1921326]
29. Atp7a ENSMUSG00000033792 1341 0.894 - 0.894 - - - - ATPase, Cu++ transporting, alpha polypeptide [Source:MGI Symbol;Acc:MGI:99400]
30. Zfp763 ENSMUSG00000067430 1561 0.878 - 0.878 - - - - zinc finger protein 763 [Source:MGI Symbol;Acc:MGI:1920701]
31. Cmah ENSMUSG00000016756 641 0.874 - 0.874 - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:MGI Symbol;Acc:MGI:103227]
32. Gm5160 ENSMUSG00000055795 8 0.873 - - - - - 0.873 predicted gene 5160 [Source:MGI Symbol;Acc:MGI:3648528]
33. Slc9a8 ENSMUSG00000039463 761 0.87 - 0.870 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]
34. E130018N17Rik ENSMUSG00000087648 10 0.868 - - - - - 0.868 RIKEN cDNA E130018N17 gene [Source:MGI Symbol;Acc:MGI:1924267]
35. Efs ENSMUSG00000022203 645 0.866 - 0.866 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
36. Anks1 ENSMUSG00000024219 2498 0.866 - 0.866 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
37. Ppm1d ENSMUSG00000020525 1303 0.865 - 0.865 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
38. Rnf19a ENSMUSG00000022280 802 0.864 - 0.864 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
39. Tex10 ENSMUSG00000028345 705 0.862 - 0.862 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
40. Arnt ENSMUSG00000015522 777 0.862 - 0.862 - - - - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
41. Bbs2 ENSMUSG00000031755 976 0.861 - 0.861 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
42. Trim39 ENSMUSG00000045409 968 0.861 - 0.861 - - - - tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
43. Hpse ENSMUSG00000035273 197 0.859 - 0.859 - - - - heparanase [Source:MGI Symbol;Acc:MGI:1343124]
44. Rnpc3 ENSMUSG00000027981 855 0.859 - 0.859 - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
45. Zbtb41 ENSMUSG00000033964 787 0.858 - 0.858 - - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
46. Gskip ENSMUSG00000044715 985 0.857 - 0.857 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
47. Zfp819 ENSMUSG00000055102 59 0.857 - 0.857 - - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
48. 2310014L17Rik 2310014L17Rik 153 0.856 - 0.856 - - - -
49. Nudt11 ENSMUSG00000073295 757 0.855 - 0.855 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
50. Gm12840 ENSMUSG00000086320 98 0.854 - 0.854 - - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
51. Atp6v0a2 ENSMUSG00000038023 268 0.853 - 0.853 - - - - ATPase, H+ transporting, lysosomal V0 subunit A2 [Source:MGI Symbol;Acc:MGI:104855]
52. AA465934 ENSMUSG00000093483 144 0.853 - 0.853 - - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
53. Sgca ENSMUSG00000001508 22 0.853 - - - - - 0.853 sarcoglycan, alpha (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:894698]
54. Gm3695 ENSMUSG00000067224 120 0.853 - 0.853 - - - - predicted gene 3695 [Source:MGI Symbol;Acc:MGI:3781871]
55. Irs1 ENSMUSG00000055980 207 0.853 - 0.853 - - - - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
56. Acer3 ENSMUSG00000030760 598 0.853 - 0.853 - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
57. Ndfip1 ENSMUSG00000024425 231 0.853 - 0.853 - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
58. Aspa ENSMUSG00000020774 50 0.853 - 0.853 - - - - aspartoacylase [Source:MGI Symbol;Acc:MGI:87914]
59. Stambpl1 ENSMUSG00000024776 130 0.853 - 0.853 - - - - STAM binding protein like 1 [Source:MGI Symbol;Acc:MGI:1923880]
60. Lox ENSMUSG00000024529 219 0.852 - 0.852 - - - - lysyl oxidase [Source:MGI Symbol;Acc:MGI:96817]
61. St3gal4 ENSMUSG00000032038 227 0.852 - 0.852 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:1316743]
62. Mettl2 ENSMUSG00000020691 572 0.852 - 0.852 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
63. Slc25a32 ENSMUSG00000022299, ENSMUSG00000107007 146 0.852 - 0.852 - - - - solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]
64. Tpmt ENSMUSG00000021376 544 0.852 - 0.852 - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
65. Xpc ENSMUSG00000030094 530 0.852 - 0.852 - - - - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
66. 3110099E03Rik ENSMUSG00000085582 57 0.852 - 0.852 - - - - RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
67. Sh3yl1 ENSMUSG00000020669 209 0.851 - 0.851 - - - - Sh3 domain YSC-like 1 [Source:MGI Symbol;Acc:MGI:1346118]
68. Nfatc2ip ENSMUSG00000030722 920 0.851 - 0.851 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
69. Rnf125 ENSMUSG00000033107 15 0.851 - - - - - 0.851 ring finger protein 125 [Source:MGI Symbol;Acc:MGI:1914914]
70. Mtus1 ENSMUSG00000045636 912 0.851 - 0.851 - - - - mitochondrial tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2142572]
71. Lphn2 Lphn2 6084 0.851 - 0.851 - - - -
72. Usb1 ENSMUSG00000031792 470 0.851 - 0.851 - - - - U6 snRNA biogenesis 1 [Source:MGI Symbol;Acc:MGI:2142454]
73. Pomk ENSMUSG00000037251 373 0.851 - 0.851 - - - - protein-O-mannose kinase [Source:MGI Symbol;Acc:MGI:1921903]
74. Aarsd1 ENSMUSG00000075528 70 0.851 - 0.851 - - - - alanyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916934]
75. Tmem203 ENSMUSG00000078201 356 0.851 - 0.851 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
76. Fam151b ENSMUSG00000034334 2211 0.851 - 0.851 - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
77. Timm23 ENSMUSG00000013701 439 0.85 - 0.850 - - - - translocase of inner mitochondrial membrane 23 [Source:MGI Symbol;Acc:MGI:1858317]
78. Pank2 ENSMUSG00000037514 1182 0.85 - 0.850 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
79. Coq10b ENSMUSG00000025981 471 0.849 - 0.849 - - - - coenzyme Q10B [Source:MGI Symbol;Acc:MGI:1915126]
80. Malt1 ENSMUSG00000032688 329 0.849 - 0.849 - - - - MALT1 paracaspase [Source:MGI Symbol;Acc:MGI:2445027]
81. Zfp428 ENSMUSG00000064264 966 0.849 - 0.849 - - - - zinc finger protein 428 [Source:MGI Symbol;Acc:MGI:1916463]
82. 4933426M11Rik 4933426M11Rik 441 0.848 - 0.848 - - - -
83. Gm20498 ENSMUSG00000021139 663 0.848 - 0.848 - - - - predicted gene 20498 [Source:MGI Symbol;Acc:MGI:5141963]
84. Spon2 ENSMUSG00000037379 204 0.848 - 0.848 - - - - spondin 2, extracellular matrix protein [Source:MGI Symbol;Acc:MGI:1923724]
85. Efemp2 ENSMUSG00000024909 777 0.848 - 0.848 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
86. Sgsm2 ENSMUSG00000038351 512 0.848 - 0.848 - - - - small G protein signaling modulator 2 [Source:MGI Symbol;Acc:MGI:2144695]
87. Gm21596 ENSMUSG00000096006 743 0.848 - 0.848 - - - - predicted gene, 21596 [Source:MGI Symbol;Acc:MGI:5434951]
88. 9630033F20Rik 9630033F20Rik 937 0.847 - 0.847 - - - -
89. Alcam ENSMUSG00000022636 2190 0.846 - 0.846 - - - - activated leukocyte cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1313266]
90. Rgl1 ENSMUSG00000026482 938 0.846 - 0.846 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
91. Zkscan5 ENSMUSG00000055991 579 0.846 - 0.846 - - - - zinc finger with KRAB and SCAN domains 5 [Source:MGI Symbol;Acc:MGI:107533]
92. Gm12088 ENSMUSG00000086707 296 0.846 - 0.846 - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
93. Ift81 ENSMUSG00000029469 806 0.846 - 0.846 - - - - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
94. Gm22662 ENSMUSG00000093031 187 0.845 - 0.845 - - - - predicted gene, 22662 [Source:MGI Symbol;Acc:MGI:5452439]
95. Zfp36 ENSMUSG00000044786 157 0.845 - 0.845 - - - - zinc finger protein 36 [Source:MGI Symbol;Acc:MGI:99180]
96. Ap3b1 ENSMUSG00000021686 3044 0.845 - 0.845 - - - - adaptor-related protein complex 3, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1333879]
97. Rhod ENSMUSG00000041845 571 0.845 - 0.845 - - - - ras homolog family member D [Source:MGI Symbol;Acc:MGI:108446]
98. Npc1 ENSMUSG00000024413 973 0.845 - 0.845 - - - - NPC intracellular cholesterol transporter 1 [Source:MGI Symbol;Acc:MGI:1097712]
99. Nid2 ENSMUSG00000021806 452 0.845 - 0.845 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
100. 4933404O12Rik ENSMUSG00000097908 302 0.844 - 0.844 - - - - RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]

There are 278 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA