Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XRN2

Gene Name Gene ID Reads Annotation
XRN2 ENSGALG00000008372 22164 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]











Genes with expression patterns similar to XRN2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XRN2 ENSGALG00000008372 22164 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
2. INCENP ENSGALG00000007537 16617 1.753 - - - - 0.890 - 0.863 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
3. FAM98A ENSGALG00000010428 9585 1.732 - - - - 0.920 - 0.812 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
4. EPFIP1L ENSGALG00000007683 18050 1.73 - - - - 0.930 - 0.800 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
5. SEC61A2 ENSGALG00000036300 4235 1.713 - - - - 0.906 - 0.807 - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
6. CCDC59 ENSGALG00000028648 9272 1.71 - - - - 0.906 - 0.804 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
7. SPG21 ENSGALG00000007262 8050 1.7 - - - - 0.929 - 0.771 - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
8. MRPL46 ENSGALG00000006782 5033 1.699 - - - - 0.907 - 0.792 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
9. SEC63 ENSGALG00000015308 11596 1.694 - - - - 0.948 - 0.746 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
10. BRP44L BRP44L 30452 1.678 - - - - 0.914 - 0.764 - - -
11. UQCRC2 ENSGALG00000002490 23477 1.667 - - - - 0.939 - 0.728 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
12. AGPAT3 ENSGALG00000031932 6903 1.658 - - - - 0.909 - 0.749 - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
13. UBE2G2 ENSGALG00000005667 12689 1.654 - - - - 0.944 - 0.710 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
14. C4orf27 C4orf27 16724 1.653 - - - - 0.900 - 0.753 - - -
15. PPAPDC1B PPAPDC1B 6698 1.652 - - - - 0.908 - 0.744 - - -
16. PSMB2 ENSGALG00000026421 51885 1.626 - - - - 0.766 - 0.860 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
17. PGAM5 ENSGALG00000002137 7700 1.624 - - - - 0.898 - 0.726 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
18. IBA57 ENSGALG00000005328 4362 1.61 - - - - 0.907 - 0.703 - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
19. MORN4 ENSGALG00000006149 7772 1.593 - - - - 0.892 - 0.701 - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
20. COX5A ENSGALG00000014121 55281 1.584 - - - - 0.821 - 0.763 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
21. RPL36AL ENSGALG00000004952 205590 1.58 - - - - 0.777 - 0.803 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
22. ULK2 ENSGALG00000004727 10729 1.58 - - - - - - 0.713 0.867 - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
23. MRPL37 ENSGALG00000010761 10596 1.535 - - - - 0.720 - 0.815 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
24. TUBB2C TUBB2C 44249 1.534 - - - - 0.714 - 0.820 - - -
25. ZNF639 ENSGALG00000005944 6387 1.48 - - - - 0.748 - 0.732 - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
26. MAP4K5 ENSGALG00000012321 3036 1.426 - - 0.719 - - - 0.707 - - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
27. CWC22 ENSGALG00000009001 5984 0.955 - - - - 0.955 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
28. ZEB1 ENSGALG00000007260 9277 0.953 - - - - 0.953 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
29. EIF3L ENSGALG00000012296 42627 0.943 - - - - 0.943 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
30. PSMD14 ENSGALG00000011128 13335 0.943 - - - - 0.943 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
31. RBM26 ENSGALG00000016910 13769 0.941 - - - - 0.941 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
32. RILPL2 ENSGALG00000003321 5632 0.934 - - - - 0.934 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
33. C15H12ORF49 C15H12ORF49 13250 0.932 - - - - 0.932 - - - - -
34. TNPO3 ENSGALG00000039420 5178 0.932 - - - - 0.932 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
35. VPS8 ENSGALG00000006704 5419 0.928 - - - - 0.928 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
36. PAX-7 PAX-7 3856 0.927 - - - - 0.927 - - - - -
37. SMNDC1 ENSGALG00000008561 14415 0.926 - - - - 0.926 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
38. RAE1 ENSGALG00000007653 8930 0.92 - - - - 0.920 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
39. CDC5L ENSGALG00000016704 22893 0.911 - - - - 0.911 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
40. WHSC1L1 4065 0.911 - - - - 0.911 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
41. VBP1 VBP1 14482 0.909 - - - - - - 0.909 - - -
42. ABCC1 ENSGALG00000006646 2596 0.909 - - - - 0.909 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
43. HTRA3 ENSGALG00000034673 512 0.909 - - - - 0.909 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
44. NDST2 ENSGALG00000005107 4224 0.909 - - - - 0.909 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
45. RNF113A ENSGALG00000000538 3985 0.909 - - - - 0.909 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
46. NOL6 ENSGALG00000030730 7191 0.909 - - - - 0.909 - - - - - nucleolar protein 6
47. BCL9 ENSGALG00000037655 4620 0.909 - - - - 0.909 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
48. MRPL22 ENSGALG00000003919 2760 0.909 - - - - 0.909 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
49. MYEOV2 MYEOV2 5155 0.908 - - - - 0.908 - - - - -
50. LUC7L2 ENSGALG00000036238 11817 0.908 - - - - 0.908 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
51. gga-mir-6584 ENSGALG00000028834 1481 0.908 - - - - 0.908 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
52. HYOU1 ENSGALG00000007659 3555 0.907 - - - - 0.907 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
53. USP1 ENSGALG00000010957 8297 0.907 - - - - 0.907 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
54. PHKA1 ENSGALG00000004801 2510 0.906 - - - - 0.906 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
55. TBRG4 ENSGALG00000038102 9269 0.906 - - - - 0.906 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
56. TBC1D7 ENSGALG00000012731 4891 0.905 - - - - 0.905 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
57. NUPL1 NUPL1 8197 0.905 - - - - - - 0.905 - - -
58. MED1 ENSGALG00000001708 9556 0.905 - - - - 0.905 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
59. EPB41L1 ENSGALG00000034171 3616 0.905 - - - - 0.905 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
60. KCTD9 ENSGALG00000000275 3455 0.905 - - - - 0.905 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
61. SMC3 ENSGALG00000008585 16618 0.904 - - - - 0.904 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
62. DNAJC2 ENSGALG00000008249 28064 0.904 - - - - 0.904 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
63. MAP1B ENSGALG00000014999 6288 0.904 - - - - 0.904 - - - - - microtubule associated protein 1B
64. TMEM39B ENSGALG00000003287 4125 0.904 - - - - 0.904 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
65. SAMM50 ENSGALG00000014194 20437 0.903 - - - - 0.903 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
66. ESRP2 ENSGALG00000003374 4436 0.903 - - - - 0.903 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
67. TMEM18 ENSGALG00000028744 11779 0.903 - - - - 0.903 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
68. OPTC ENSGALG00000003554 3698 0.903 - - - - 0.903 - - - - - opticin [Source:NCBI gene;Acc:395130]
69. THBS1 ENSGALG00000009626 3521 0.902 - - - - 0.902 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
70. NSG1 ENSGALG00000015010 5829 0.902 - - - - 0.902 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
71. RUNX1T1 ENSGALG00000033091 17529 0.901 - - - - 0.901 - - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
72. TM2D2 ENSGALG00000003356 7088 0.901 - - - - 0.901 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
73. HMGB3 ENSGALG00000009071 12011 0.9 - - - - 0.900 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
74. SUMO3 ENSGALG00000032783 47823 0.899 - - - - 0.899 - - - - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
75. MRPS11 ENSGALG00000006777 16009 0.899 - - - - 0.899 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
76. TCF7L2 ENSGALG00000008883 13688 0.898 - - - - 0.898 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
77. ABCF2 ENSGALG00000034573 15639 0.898 - - - - 0.898 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
78. RAB21 ENSGALG00000010183 7718 0.898 - - - - 0.898 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
79. TRIM33 ENSGALG00000001976 7404 0.898 - - - - 0.898 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
80. PSMC3 ENSGALG00000008108 22922 0.898 - - - - - - 0.898 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
81. CENPE ENSGALG00000013208 12337 0.897 - - - - 0.897 - - - - - centromere protein E, transcript variant X4
82. HOXB3 ENSGALG00000043219 5198 0.897 - - - - 0.897 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
83. C1QBP ENSGALG00000001654 34814 0.895 - - - - - - 0.895 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
84. ETF1 ENSGALG00000002262 14560 0.895 - - - - 0.895 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
85. MCM4 ENSGALG00000012915 13151 0.894 - - - - 0.894 - - - - - minichromosome maintenance complex component 4
86. MTF2 ENSGALG00000043087 15225 0.891 - - - - 0.891 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
87. OAF ENSGALG00000006715 12518 0.89 - - - - 0.890 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
88. M6PR ENSGALG00000031681 9442 0.89 - - - - 0.890 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
89. RALB ENSGALG00000026493 14590 0.889 - - - - 0.889 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
90. GLRX3 ENSGALG00000010464 22578 0.888 - - - - - - 0.888 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
91. HERC2 ENSGALG00000016739 9900 0.885 - - - - - - 0.885 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
92. NUP37 ENSGALG00000012759 9985 0.885 - - - - 0.885 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
93. CDC45 ENSGALG00000001616 8432 0.883 - - - - - - 0.883 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
94. ATP5C1 53961 0.882 - - - - 0.882 - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
95. LSM5 ENSGALG00000041625 22307 0.882 - - - - - - 0.882 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
96. RPS6 ENSGALG00000015082 307412 0.881 - - - - 0.881 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
97. PUF60 ENSGALG00000039901 26902 0.881 - - - - 0.881 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
98. MZT1 ENSGALG00000016932 9269 0.88 - - - - - - 0.880 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
99. CREPT CREPT 17142 0.879 - - - - 0.879 - - - - -
100. CRLS1 ENSGALG00000009214 8652 0.879 - - - - - - 0.879 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]

There are 879 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA