Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XRCC6

Gene Name Gene ID Reads Annotation
XRCC6 ENSGALG00000011932 2302 X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]











Genes with expression patterns similar to XRCC6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XRCC6 ENSGALG00000011932 2302 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]
2. NDUFB1 ENSGALG00000028537 2059 1.677 - - 0.861 - - - 0.816 - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
3. GGT7 ENSGALG00000001062 476 1.635 - - 0.886 - - - 0.749 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
4. MYCBP2 ENSGALG00000016915 2374 1.566 - - 0.782 - - - 0.784 - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
5. KLF4 ENSGALG00000026928 184 1.476 - - - - - 0.724 0.752 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
6. FAR-1 FAR-1 1855 0.932 - - 0.932 - - - - - - -
7. NCOA5 ENSGALG00000007009 299 0.915 - - - - - - 0.915 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
8. CHAMP1 ENSGALG00000016813 508 0.914 - - 0.914 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
9. MLLT3 ENSGALG00000015078 502 0.912 - - 0.912 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
10. FBXO45 ENSGALG00000037281 3936 0.91 - - 0.910 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
11. TMEM242 ENSGALG00000013689 377 0.907 - - 0.907 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
12. LXR LXR 2599 0.906 - - 0.906 - - - - - - -
13. RECQL ENSGALG00000013174 1323 0.906 - - 0.906 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
14. ATF7IP ENSGALG00000011814 1571 0.904 - - 0.904 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
15. PCDH17 ENSGALG00000016941 1006 0.903 - - 0.903 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
16. ITM2B ENSGALG00000016996 1112 0.902 - - 0.902 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
17. BAG5 ENSGALG00000031062 4498 0.902 - - 0.902 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
18. C18orf8 C18orf8 1512 0.897 - - 0.897 - - - - - - -
19. ENSGALG00000028964 ENSGALG00000028964 46 0.895 - - 0.895 - - - - - - -
20. MRC2 ENSGALG00000000461 48 0.895 - - 0.895 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
21. ITGB4 ENSGALG00000002389 44 0.895 - - 0.895 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
22. TCTN2 ENSGALG00000023683 3596 0.895 - - 0.895 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
23. TDRD6 48 0.895 - - 0.895 - - - - - - - tudor domain containing 6
24. UEVLD ENSGALG00000006342 164 0.895 - - 0.895 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
25. RPS6KB1 ENSGALG00000005198 169 0.894 - - 0.894 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
26. RAD54L2 ENSGALG00000003243 187 0.894 - - 0.894 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
27. MIB1 ENSGALG00000014974 3583 0.894 - - 0.894 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
28. RQCD1 RQCD1 110 0.894 - - 0.894 - - - - - - -
29. CDC14B ENSGALG00000012627 110 0.893 - - 0.893 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
30. FBXL5 ENSGALG00000014510 245 0.893 - - 0.893 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
31. HYAL1 ENSGALG00000000785 1778 0.893 - - 0.893 - - - - - - - hyaluronoglucosaminidase 1, transcript variant X3
32. SZT2 ENSGALG00000028561 255 0.893 - - 0.893 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
33. TRIM13 ENSGALG00000017011 92 0.893 - - 0.893 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
34. CLEC16A ENSGALG00000007167 66 0.892 - - 0.892 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
35. ENSGALG00000004703 ENSGALG00000004703 112 0.892 - - 0.892 - - - - - - -
36. WDR92 ENSGALG00000008760 3934 0.892 - - 0.892 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
37. GTF2H2 ENSGALG00000002399 2361 0.892 - - 0.892 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
38. SLC3A1 ENSGALG00000009973 608 0.892 - - 0.892 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
39. MED12 ENSGALG00000036322 814 0.892 - - 0.892 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
40. SMARCAD1 ENSGALG00000037339 149 0.892 - - 0.892 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
41. OSGIN2 ENSGALG00000042840 83 0.891 - - 0.891 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
42. U4 U4 69 0.891 - - 0.891 - - - - - - -
43. ENSGALG00000020103 ENSGALG00000020103 64 0.891 - - 0.891 - - - - - - -
44. AKAP10 ENSGALG00000004679 103 0.891 - - 0.891 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. STAU1 ENSGALG00000004736 3828 0.891 - - 0.891 - - - - - - - staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
46. ATP8B4 ENSGALG00000002326 456 0.891 - - 0.891 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
47. L3MBTL3 ENSGALG00000034030 113 0.89 - - 0.890 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
48. F2R ENSGALG00000014983 106 0.89 - - 0.890 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
49. ENSGALG00000002020 ENSGALG00000002020 183 0.89 - - 0.890 - - - - - - -
50. MRPS33 ENSGALG00000028879 17966 0.889 - - 0.889 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
51. GDPD4 ENSGALG00000000690 824 0.889 - - 0.889 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. NGF ENSGALG00000002556 122 0.889 - - 0.889 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
53. DBN1 ENSGALG00000033405 216 0.889 - - 0.889 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
54. BBX ENSGALG00000015353 1281 0.889 - - 0.889 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
55. NXPE3 ENSGALG00000015344 111 0.888 - - 0.888 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
56. ANO6 ENSGALG00000009638 470 0.888 - - - - - - 0.888 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
57. PTDSS2 ENSGALG00000004300 682 0.887 - - 0.887 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
58. RFK ENSGALG00000033558 1364 0.887 - - 0.887 - - - - - - - riboflavin kinase, transcript variant X3
59. ABCC3 ENSGALG00000007522 340 0.887 - - 0.887 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
60. STAMBP ENSGALG00000042555 1362 0.887 - - 0.887 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
61. PSMD14 ENSGALG00000011128 13335 0.887 - - 0.887 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
62. BBS5 ENSGALG00000009846 344 0.886 - - 0.886 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
63. LRRC71 ENSGALG00000027351 695 0.886 - - 0.886 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
64. CYTH1 ENSGALG00000007093 2453 0.886 - - 0.886 - - - - - - - cytohesin 1 [Source:NCBI gene;Acc:422085]
65. PRUNE PRUNE 452 0.886 - - 0.886 - - - - - - -
66. ENSGALG00000008689 ENSGALG00000008689 232 0.885 - - 0.885 - - - - - - -
67. ADK ENSGALG00000005057 199 0.885 - - 0.885 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
68. PEMT ENSGALG00000004875 4094 0.884 - - 0.884 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
69. BRE 10440 0.884 - - 0.884 - - - - - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
70. SHROOM2 ENSGALG00000030802 4517 0.884 - - 0.884 - - - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
71. NACAD 679 0.884 - - 0.884 - - - - - - - NAC alpha domain containing, transcript variant X1
72. SLC37A3 ENSGALG00000012849 836 0.884 - - 0.884 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
73. FAM134C 860 0.884 - - 0.884 - - - - - - - family with sequence similarity 134 member C
74. LRRC42 ENSGALG00000010743 384 0.883 - - 0.883 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
75. TUBGCP3 ENSGALG00000016836 332 0.883 - - 0.883 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
76. SLC39A6 ENSGALG00000013209 1754 0.883 - - 0.883 - - - - - - - solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
77. TTPAL ENSGALG00000004244 2734 0.882 - - 0.882 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
78. AMBRA1 ENSGALG00000008358 2865 0.882 - - 0.882 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
79. ABCE1 ENSGALG00000009961 958 0.88 - - 0.880 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
80. ST14 ENSGALG00000001331 1655 0.879 - - 0.879 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
81. SMOC2 ENSGALG00000011205 340 0.879 - - 0.879 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
82. CEP104 ENSGALG00000000978 1130 0.878 - - 0.878 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
83. RALGAPA2 240 0.878 - - 0.878 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
84. CA9 ENSGALG00000021340 1431 0.877 - - 0.877 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
85. HOXA7 ENSGALG00000026989 6746 0.877 - - 0.877 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
86. CENPO ENSGALG00000016609 1699 0.877 - - 0.877 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
87. LPCAT3 ENSGALG00000014570 7919 0.876 - - 0.876 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
88. IFT81 ENSGALG00000003854 2534 0.876 - - 0.876 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
89. RAD1 ENSGALG00000003365 1417 0.876 - - 0.876 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
90. CDK13 ENSGALG00000043243 2084 0.876 - - 0.876 - - - - - - - cyclin dependent kinase 13 [Source:HGNC Symbol;Acc:HGNC:1733]
91. KCTD3 ENSGALG00000009678 335 0.876 - - 0.876 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
92. WAPAL WAPAL 625 0.875 - - 0.875 - - - - - - -
93. DAK DAK 13208 0.875 - - 0.875 - - - - - - -
94. CHGA ENSGALG00000010820 1028 0.875 - - 0.875 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
95. CEP112 ENSGALG00000034989 123 0.874 - - - - - - 0.874 - - - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
96. GFER ENSGALG00000005579 1367 0.874 - - 0.874 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
97. SGCE ENSGALG00000009670 3070 0.872 - - 0.872 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
98. MTHFSD ENSGALG00000033322 824 0.872 - - 0.872 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
99. PDPK1 ENSGALG00000006418 13412 0.872 - - 0.872 - - - - - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
100. ATRIP ENSGALG00000004670 3647 0.871 - - 0.871 - - - - - - - ATR interacting protein [Source:NCBI gene;Acc:415949]

There are 476 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA