Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XRCC4

Gene Name Gene ID Reads Annotation
XRCC4 ENSGALG00000015620 28 X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]











Genes with expression patterns similar to XRCC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XRCC4 ENSGALG00000015620 28 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
2. C8orf22 C8orf22 37 2.416 - - - - 0.779 0.919 - - - 0.718
3. STAB2 32 1.629 - - - 0.738 - - - - - 0.891 stabilin 2
4. ENSGALG00000005114 ENSGALG00000005114 79 0.941 - - - - - 0.941 - - - -
5. ATXN7L1 ENSGALG00000008115 84 0.928 - - - - - - - - - 0.928 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
6. RNF19A ENSGALG00000038772 380 0.921 - - - - - 0.921 - - - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
7. LOC112532977 ENSGALG00000020986 1 0.92 - - - 0.920 - - - - - - G-protein coupled receptor 35-like, transcript variant X2
8. ARL15 ENSGALG00000014911 13 0.92 - - - 0.920 - - - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
9. IL17F ENSGALG00000016677 9 0.92 - - - 0.920 - - - - - - interleukin 17F
10. gga-mir-30d ENSGALG00000018290 9 0.92 - - - 0.920 - - - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
11. USH2A ENSGALG00000009652 2 0.92 - - - 0.920 - - - - - - usherin, transcript variant X3
12. BTBD6 ENSGALG00000033813 163 0.92 - - - 0.920 - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
13. GPD1L2 ENSGALG00000012061 31 0.92 - - - 0.920 - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
14. SYTL2L ENSGALG00000008326 5 0.92 - - - 0.920 - - - - - - synaptotagmin-like protein 2-like, transcript variant X4
15. CECR2 ENSGALG00000013034 12 0.92 - - - 0.920 - - - - - - CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
16. ENSGALG00000028196 ENSGALG00000028196 8 0.92 - - - 0.920 - - - - - -
17. MGRN1 ENSGALG00000037492 372 0.92 - - - 0.920 - - - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
18. ACACB 6 0.92 - - - 0.920 - - - - - - acetyl-CoA carboxylase beta
19. TTC7B ENSGALG00000010680 4 0.92 - - - 0.920 - - - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
20. TP53I3 ENSGALG00000016502 178 0.92 - - - 0.920 - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
21. GSS ENSGALG00000003281 57 0.92 - - - 0.920 - - - - - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
22. TNFSF11 ENSGALG00000026163 26 0.92 - - - 0.920 - - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
23. P2RY13 ENSGALG00000039432 16 0.92 - - - 0.920 - - - - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
24. UAP1L1 ENSGALG00000034948 3 0.92 - - - 0.920 - - - - - - UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 [Source:HGNC Symbol;Acc:HGNC:28082]
25. RBM43 ENSGALG00000012479 5 0.92 - - - 0.920 - - - - - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
26. ENSGALG00000006449 ENSGALG00000006449 1 0.92 - - - 0.920 - - - - - -
27. IP3KA IP3KA 4 0.919 - - - - - 0.919 - - - -
28. SCARNA7 SCARNA7 2 0.919 - - - - - 0.919 - - - -
29. HEPACAM2 ENSGALG00000009482 3 0.919 - - - - - 0.919 - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
30. MEX3D ENSGALG00000001106 2 0.919 - - - - - 0.919 - - - - mex-3 RNA binding family member D, transcript variant X3
31. GPR156 ENSGALG00000014973 4 0.919 - - - - - 0.919 - - - - G protein-coupled receptor 156, transcript variant X4
32. STAR ENSGALG00000003242 4 0.919 - - - - - 0.919 - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
33. TG ENSGALG00000039509 19 0.919 - - - - - 0.919 - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
34. LOC417973 ENSGALG00000019325 9 0.919 - - - - - 0.919 - - - - uncharacterized LOC417973, transcript variant X1
35. ENSGALG00000027371 ENSGALG00000027371 1 0.919 - - - - - 0.919 - - - -
36. KLHL28 ENSGALG00000012489 2 0.919 - - - - - 0.919 - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
37. BNC1 ENSGALG00000006041 63 0.919 - - - - - 0.919 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
38. KCNK9 ENSGALG00000037285 1 0.919 - - - - - 0.919 - - - - potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
39. PTPRT ENSGALG00000037889 5 0.919 - - - - - 0.919 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
40. HELB ENSGALG00000009885 8 0.919 - - - - - 0.919 - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
41. ENSGALG00000022810 ENSGALG00000022810 1 0.919 - - - - - 0.919 - - - -
42. NTRK2 ENSGALG00000012594 24 0.919 - - - - - 0.919 - - - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
43. PPIL6 ENSGALG00000015237 11 0.919 - - - - - 0.919 - - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
44. CAD19 CAD19 17 0.919 - - - - - 0.919 - - - -
45. SCN4B ENSGALG00000007409 22 0.919 - - - - - 0.919 - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
46. SLC47A2 ENSGALG00000004778 2 0.919 - - - - - 0.919 - - - - solute carrier family 47 member 2 [Source:NCBI gene;Acc:417616]
47. AK7 ENSGALG00000011093 9 0.919 - - - - - 0.919 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
48. GPR160 ENSGALG00000039989 1 0.919 - - - - - 0.919 - - - - G protein-coupled receptor 160 [Source:NCBI gene;Acc:424992]
49. CECR5 3 0.919 - - - - - 0.919 - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X2
50. MST MST 9 0.919 - - - - - 0.919 - - - -
51. CMBL ENSGALG00000013033 3 0.919 - - - - - 0.919 - - - - carboxymethylenebutenolidase homolog, transcript variant X4
52. DUSP27 ENSGALG00000015453 17 0.919 - - - - - 0.919 - - - - dual specificity phosphatase 27, atypical [Source:HGNC Symbol;Acc:HGNC:25034]
53. SLC5A12 ENSGALG00000013304 1 0.919 - - - - - 0.919 - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
54. SYNRG ENSGALG00000005468 27 0.919 - - - - - 0.919 - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
55. DSE ENSGALG00000014963 70 0.913 - - - - - 0.913 - - - - dermatan sulfate epimerase, transcript variant X1
56. SLC1A2 ENSGALG00000037556 22 0.912 - - - - - 0.912 - - - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
57. BROX ENSGALG00000009413 15 0.907 - - - - - 0.907 - - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
58. MMEL1 ENSGALG00000001115 46 0.904 - - - - - - - - - 0.904 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
59. DMB1 ENSGALG00000000162 7 0.903 - - - - - 0.903 - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
60. HDAC3 ENSGALG00000002634 130 0.899 - - - - - 0.899 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
61. ZNF770 ENSGALG00000009817 27 0.894 - - - - - - - - - 0.894 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
62. LOC100858777 ENSGALG00000027624 58 0.892 - - - - - - - - - 0.892 rhodopsin, GQ-coupled-like
63. MMP23B ENSGALG00000001392 53 0.889 - - - - - 0.889 - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
64. PPTC7 ENSGALG00000004550 154 0.887 - - - - - - - - - 0.887 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
65. DENND1B ENSGALG00000002246 6 0.886 - - - - - - - - - 0.886 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
66. CFH ENSGALG00000002431 31 0.884 - - - - - - - - - 0.884 complement factor H, transcript variant X1
67. CHST8 ENSGALG00000004903 16 0.883 - - - - - - - - - 0.883 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
68. NCX1 NCX1 9 0.883 - - - - - - - - - 0.883
69. NOX3 ENSGALG00000013659 4 0.883 - - - - - - - - - 0.883 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
70. ENSGALG00000012920 ENSGALG00000012920 8 0.883 - - - - - - - - - 0.883
71. IFNG ENSGALG00000009903 5 0.883 - - - - - - - - - 0.883 interferon gamma [Source:NCBI gene;Acc:396054]
72. ROS1 ENSGALG00000014913 7 0.883 - - - - - - - - - 0.883 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
73. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.883 - - - - - - - - - 0.883 secretin, transcript variant X6
74. C2 ENSGALG00000035721 5 0.883 - - - - - - - - - 0.883 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
75. GPR12 ENSGALG00000017102 4 0.883 - - - - - - - - - 0.883 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
76. MUC4 4 0.883 - - - - - - - - - 0.883 mucin 4, cell surface associated, transcript variant X5
77. ENSGALG00000001629 ENSGALG00000001629 31 0.882 - - - - - - - - - 0.882
78. STOML3 ENSGALG00000017039 6 0.878 - - - - - - - - - 0.878 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
79. CSF3 ENSGALG00000030907 11 0.878 - - - - - - - - - 0.878 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
80. SNAPC1 ENSGALG00000011868 65 0.875 - - - - - - - - - 0.875 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
81. ZC3H7B ENSGALG00000011965 6 0.874 - - - - - - - - - 0.874 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
82. ENSGALG00000005650 ENSGALG00000005650 6 0.873 - - - 0.873 - - - - - -
83. CCR5 ENSGALG00000037077 23 0.873 - - - - - - - - - 0.873 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
84. PPL ENSGALG00000002201 13 0.87 - - - - - 0.870 - - - - periplakin
85. PACRGL ENSGALG00000014406 18 0.869 - - - - - 0.869 - - - - parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
86. INF2 ENSGALG00000011608 36 0.868 - - - - - 0.868 - - - - inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:HGNC:23791]
87. gga-mir-1600 ENSGALG00000025438 248 0.868 - - - - - - - - - 0.868 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
88. LHX9 ENSGALG00000002223 12 0.864 - - - - - - - - - 0.864 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
89. ISPD ENSGALG00000010795 7 0.863 - - - - - - - - - 0.863 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
90. LPAR5 ENSGALG00000014455 10 0.863 - - - - - 0.863 - - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
91. TERF2IP ENSGALG00000000903 41 0.861 - - - - - - - - - 0.861 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
92. MDGA1 ENSGALG00000010145 13 0.861 - - - - - 0.861 - - - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
93. PLCB2 ENSGALG00000042105 2 0.86 - - - 0.860 - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
94. C10orf67 15 0.86 - - - 0.860 - - - - - - chromosome 10 open reading frame 67, transcript variant X2
95. SERPINE3 ENSGALG00000017017 32 0.859 - - - - - - - - - 0.859 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
96. ECSCR ENSGALG00000024379 313 0.858 - - - - - - - - - 0.858 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
97. DNAH7 ENSGALG00000007841 32 0.858 - - - - - - - - - 0.858 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
98. MISP 52 0.856 - - - - - - - - - 0.856 mitotic spindle positioning, transcript variant X2
99. CPNE7 ENSGALG00000000507 54 0.856 - - - - - - - - - 0.856 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
100. SDSL ENSGALG00000008317 55 0.855 - - - - - - - - - 0.855 serine dehydratase like [Source:NCBI gene;Acc:417030]

There are 146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA