Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for XRCC3

Gene Name Gene ID Reads Annotation
XRCC3 ENSGALG00000011533 3768 X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]











Genes with expression patterns similar to XRCC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XRCC3 ENSGALG00000011533 3768 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
2. HEY1 ENSGALG00000035031 8795 1.886 - - - - - - 0.999 0.887 - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
3. ZNF385D ENSGALG00000011283 2578 1 - - - - - - 1.000 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
4. UFSP2 ENSGALG00000010601 5809 1 - - - - - - 1.000 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
5. RANBP3 ENSGALG00000000577 8856 1 - - - - - - 1.000 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
6. DNAH17 1389 1 - - - - - - 1.000 - - - dynein axonemal heavy chain 17, transcript variant X6
7. AP3B2 2331 0.999 - - - - - - 0.999 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X7
8. CEP19 ENSGALG00000006405 1645 0.999 - - - - - - 0.999 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
9. RALGAPA1 ENSGALG00000010088 6005 0.999 - - - - - - 0.999 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
10. MAST4 ENSGALG00000014784 4153 0.999 - - - - - - 0.999 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
11. GCC1 ENSGALG00000033149 1915 0.999 - - - - - - 0.999 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
12. CTNNA1 ENSGALG00000002447 22379 0.999 - - - - - - 0.999 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
13. ACAT1 ENSGALG00000017163 6239 0.999 - - - - - - 0.999 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
14. SSB ENSGALG00000009677 25335 0.999 - - - - - - 0.999 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
15. RWDD2B ENSGALG00000015807 3601 0.999 - - - - - - 0.999 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
16. DGCR14 DGCR14 2633 0.999 - - - - - - 0.999 - - -
17. ENSGALG00000023608 ENSGALG00000023608 1538 0.999 - - - - - - 0.999 - - -
18. INPP5K ENSGALG00000002739 8120 0.998 - - - - - - 0.998 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
19. BCKDHB ENSGALG00000040702 9373 0.998 - - - - - - 0.998 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
20. SESTD1 ENSGALG00000009031 13090 0.998 - - - - - - 0.998 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
21. FASN ENSGALG00000040896 17372 0.997 - - - - - - 0.997 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
22. RNF11 ENSGALG00000010539 8617 0.997 - - - - - - 0.997 - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
23. TMEM258 ENSGALG00000038292 31116 0.997 - - - - - - 0.997 - - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
24. TPX2 ENSGALG00000006267 26087 0.996 - - - - - - 0.996 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
25. NUS1 ENSGALG00000014899 13352 0.996 - - - - - - 0.996 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
26. USMG5 ENSGALG00000034645 33263 0.995 - - - - - - 0.995 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
27. PSMD7 ENSGALG00000000707 26350 0.995 - - - - - - 0.995 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
28. COL4A5 ENSGALG00000008141 15874 0.994 - - - - - - 0.994 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
29. ENSGALG00000023447 ENSGALG00000023447 17486 0.994 - - - - - - 0.994 - - -
30. RNF4 ENSGALG00000015668 15780 0.992 - - - - - - 0.992 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
31. MSH2 ENSGALG00000008962 9709 0.992 - - - - - - 0.992 - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
32. UFM1 ENSGALG00000017042 15794 0.991 - - - - - - 0.991 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
33. CFL2 ENSGALG00000010027 16952 0.988 - - - - - - 0.988 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
34. SRPR SRPR 21067 0.987 - - - - - - 0.987 - - -
35. CKS1B ENSGALG00000028664 42261 0.986 - - - - - - 0.986 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
36. MRPS21 ENSGALG00000000456 35298 0.982 - - - - - - 0.982 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
37. H3-IX_1 H3-IX_1 54392 0.977 - - - - - - 0.977 - - -
38. MAPRE1 ENSGALG00000006657 64346 0.966 - - - - - - 0.966 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
39. LSMD1 LSMD1 2562 0.963 - - - - - - - 0.963 - -
40. PPM1B ENSGALG00000030691 4513 0.957 - - - - - - - 0.957 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
41. ENSGALG00000009863 ENSGALG00000009863 7375 0.955 - - - - - - - 0.955 - -
42. CLCN7 ENSGALG00000030826 3173 0.952 - - - - - - - 0.952 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
43. TTPAL ENSGALG00000004244 2734 0.952 - - - - - - - 0.952 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
44. RPS6KA RPS6KA 6745 0.951 - - - - - - - 0.951 - -
45. MAP3K4 ENSGALG00000020003 6378 0.951 - - - - - - - 0.951 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
46. GNPAT ENSGALG00000011163 4286 0.948 - - - - - - - 0.948 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
47. FAF1 ENSGALG00000010536 1522 0.944 - - - - - - - 0.944 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
48. WDYHV1 ENSGALG00000030059 2961 0.944 - - - - - - - 0.944 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
49. CMTM7 ENSGALG00000011488 1406 0.943 - - - - - - - 0.943 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
50. NUDT4 ENSGALG00000011285 2998 0.942 - - - - - - - 0.942 - - nudix hydrolase 4, transcript variant X5
51. ENSGALG00000017324 ENSGALG00000017324 8235 0.941 - - - - - - - 0.941 - -
52. POLD3 ENSGALG00000017307 2136 0.941 - - - - - - - 0.941 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
53. COG5 ENSGALG00000042764 4205 0.941 - - - - - - - 0.941 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
54. SUN1 ENSGALG00000003781 3442 0.941 - - - - - - - 0.941 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
55. CHMP2B ENSGALG00000015496 3973 0.94 - - - - - - - 0.940 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
56. MPP5 ENSGALG00000009581 724 0.94 - - - - - - - 0.940 - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
57. STAU2 ENSGALG00000031390 2008 0.939 - - - - - - - 0.939 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
58. MCAT ENSGALG00000034275 4598 0.939 - - - - - - - 0.939 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
59. CLUAP1 ENSGALG00000030877 4269 0.939 - - - - - - - 0.939 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
60. RGN ENSGALG00000016724 3184 0.938 - - - - - - - 0.938 - - regucalcin [Source:NCBI gene;Acc:395480]
61. OFD1 ENSGALG00000016576 1916 0.938 - - - - - - - 0.938 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
62. SNTB1 ENSGALG00000034528 3907 0.937 - - - - - - - 0.937 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
63. VAT1 ENSGALG00000002818 10333 0.937 - - - - - - - 0.937 - - vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
64. PLA2G12A ENSGALG00000012185 5261 0.937 - - - - - - - 0.937 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
65. DCUN1D2 ENSGALG00000029145 2414 0.937 - - - - - - - 0.937 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
66. PARPBP ENSGALG00000012756 1895 0.936 - - - - - - - 0.936 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
67. TAF1B ENSGALG00000016437 2318 0.936 - - - - - - - 0.936 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
68. HNRNPA2B1 ENSGALG00000011036 53662 0.936 - - - - - - 0.936 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
69. TRIP11 ENSGALG00000010763 3146 0.934 - - - - - - - 0.934 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
70. MICU1 ENSGALG00000004372 1978 0.934 - - - - - - - 0.934 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
71. MED12L ENSGALG00000010370 765 0.934 - - - - - - - 0.934 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
72. CENPI ENSGALG00000005038 2608 0.934 - - - - - - - 0.934 - - centromere protein I [Source:NCBI gene;Acc:395207]
73. TMEM33 ENSGALG00000014248 6069 0.933 - - - - - - - 0.933 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
74. ATG2B ENSGALG00000042088 918 0.933 - - - - - - - 0.933 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
75. CHTF18 ENSGALG00000040157 2140 0.932 - - - - - - - 0.932 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
76. ZNF652 ENSGALG00000001279 1188 0.932 - - - - - - - 0.932 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
77. HNMT ENSGALG00000012377 227 0.932 - - - - - - - 0.932 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
78. OSBPL1A ENSGALG00000015086 2702 0.932 - - - - - - - 0.932 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
79. OSR1 ENSGALG00000016473 1202 0.932 - - - - - - - 0.932 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
80. ESRRG ENSGALG00000009645 2783 0.931 - - - - - - - 0.931 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
81. KIF25 ENSGALG00000011299 2601 0.93 - - - - - - - 0.930 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
82. NF1 ENSGALG00000005660 1610 0.93 - - - - - - - 0.930 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
83. PRKAB2 ENSGALG00000001678 1999 0.93 - - - - - - - 0.930 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
84. STX16 ENSGALG00000007541 6458 0.93 - - - - - - - 0.930 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
85. TMEM185A ENSGALG00000009139 4424 0.93 - - - - - - - 0.930 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
86. C1orf50 ENSGALG00000004800 4894 0.929 - - - - - - - 0.929 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
87. CUL5 ENSGALG00000017165 2480 0.929 - - - - - - - 0.929 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
88. TNNC1 ENSGALG00000001459 7110 0.929 - - - - - - - 0.929 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
89. ENSGALG00000003847 ENSGALG00000003847 1220 0.929 - - - - - - - 0.929 - -
90. MST4 MST4 1931 0.929 - - - - - - - 0.929 - -
91. SUV420H1 SUV420H1 2361 0.929 - - - - - - - 0.929 - -
92. FER1L6 ENSGALG00000033783 196 0.929 - - - - - - - 0.929 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
93. SMPD2 ENSGALG00000033245 462 0.929 - - - - - - - 0.929 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
94. ZBTB24 ENSGALG00000015231 1384 0.928 - - - - - - - 0.928 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
95. SURF1 ENSGALG00000033754 2130 0.928 - - - - - - - 0.928 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
96. ZNF142 ENSGALG00000011393 2078 0.927 - - - - - - - 0.927 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
97. DAB1 ENSGALG00000010857 1085 0.927 - - - - - - - 0.927 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
98. LGALS1_1 ENSGALG00000012420 1560 0.927 - - - - - - - 0.927 - - galectin 1 [Source:NCBI gene;Acc:396491]
99. USP12P1 USP12P1 4193 0.927 - - - - - - - 0.927 - -
100. GTF2H4 GTF2H4 5227 0.926 - - - - - - - 0.926 - -

There are 178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA