Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XIRP1

Gene Name Gene ID Reads Annotation
XIRP1 ENSGALG00000006025 729 xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]











Genes with expression patterns similar to XIRP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XIRP1 ENSGALG00000006025 729 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
2. ACTC1 ENSGALG00000009844 20914 5.551 0.823 - 0.761 0.845 0.771 - 0.874 - 0.747 0.730 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. gga-mir-7474 ENSGALG00000033766 5727 4.746 0.763 - 0.744 0.828 0.811 - 0.792 - 0.808 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
4. MYH15 ENSGALG00000015358 6304 3.65 0.706 - - 0.725 0.718 - - - 0.787 0.714 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
5. KLHL31 ENSGALG00000016309 1518 3.049 0.748 - 0.735 - - - 0.713 - 0.853 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
6. C1QTNF3 ENSGALG00000027887 8646 2.323 - - 0.777 0.781 0.765 - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
7. TCF15 ENSGALG00000026276 3646 2.297 - - 0.737 - 0.830 - 0.730 - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
8. PKD2L2 ENSGALG00000006120 592 2.279 - - 0.790 - 0.772 - 0.717 - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
9. TPM1 ENSGALG00000003521 11894 2.257 - - - 0.779 0.769 - 0.709 - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
10. TNNI1 ENSGALG00000000313 4069 2.169 0.712 - - - 0.729 - - - 0.728 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
11. TNNC2 ENSGALG00000006835 2963 2.136 - - - 0.713 0.704 - - - 0.719 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
12. TRIM55 ENSGALG00000041327 1097 1.625 0.832 - 0.793 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
13. TNNT3 ENSGALG00000006572 1652 1.585 - - 0.739 0.846 - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
14. TNNT2 ENSGALG00000000302 568 1.527 0.748 - - 0.779 - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
15. TITIN TITIN 589 1.526 - - - 0.737 - - - - 0.789 -
16. RBM24 ENSGALG00000012712 4138 1.519 0.789 - 0.730 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
17. MYL2_1 ENSGALG00000004582 2367 1.512 - - - - 0.791 - - - 0.721 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
18. SH3BGR ENSGALG00000016127 2561 1.511 0.703 - - 0.808 - - - - - - SH3 domain binding glutamate rich protein
19. UNC45B ENSGALG00000002186 399 1.506 0.764 - - - - - 0.742 - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
20. MYL3 ENSGALG00000005448 3379 1.502 0.779 - - - - - - - 0.723 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
21. HSPB2 ENSGALG00000040842 197 1.501 0.757 - - - - - - - 0.744 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
22. MYOG ENSGALG00000000172 460 1.493 - - 0.713 - - - 0.780 - - - myogenin [Source:NCBI gene;Acc:374004]
23. NEXN ENSGALG00000008945 1504 1.451 - - 0.714 0.737 - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
24. MYBPC1 ENSGALG00000012783 317 1.441 - - - 0.701 0.740 - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
25. SOX9 ENSGALG00000004386 14802 1.42 - - - 0.707 0.713 - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
26. ACTA1 ENSGALG00000011086 2543 1.406 - - 0.700 0.706 - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
27. EZH1 ENSGALG00000003068 30 1 - - - - - - - 1.000 - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
28. ADCK3 ADCK3 110 1 - - - - - 1.000 - - - -
29. MICAL3 ENSGALG00000013042 90 0.983 - - - - - - - 0.983 - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
30. TM7SF3 ENSGALG00000014085 3 0.939 - - - - - 0.939 - - - - transmembrane 7 superfamily member 3 [Source:HGNC Symbol;Acc:HGNC:23049]
31. CACNA1C ENSGALG00000013022 322 0.939 - - - - - - - 0.939 - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
32. EPHA1 ENSGALG00000014687 174 0.921 - - - - - 0.921 - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
33. HOXB9 ENSGALG00000001276 55 0.913 - - - - - 0.913 - - - - homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
34. FAM198B ENSGALG00000042411 65 0.884 - - - - - 0.884 - - - - family with sequence similarity 198 member B [Source:HGNC Symbol;Acc:HGNC:25312]
35. ENTPD1 ENSGALG00000007078 5 0.884 - - - - - 0.884 - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:NCBI gene;Acc:423826]
36. C10orf67 15 0.884 - - - - - 0.884 - - - - chromosome 10 open reading frame 67, transcript variant X2
37. HHAT ENSGALG00000009881 7 0.884 - - - - - 0.884 - - - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
38. ZPBP2 ENSGALG00000013484 14 0.884 - - - - - 0.884 - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
39. C4orf33 ENSGALG00000010108 4 0.884 - - - - - 0.884 - - - - chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:27025]
40. ENSGALG00000011233 ENSGALG00000011233 42 0.884 - - - - - 0.884 - - - -
41. ENSGALG00000025721 ENSGALG00000025721 33 0.884 - - - - - 0.884 - - - -
42. ZNF804A ENSGALG00000023886 52 0.884 - - - - - 0.884 - - - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
43. GMPR ENSGALG00000012705 30 0.884 - - - - - 0.884 - - - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
44. SPIC ENSGALG00000027209 3 0.884 - - - - - 0.884 - - - - Spi-C transcription factor [Source:HGNC Symbol;Acc:HGNC:29549]
45. TRIM14 ENSGALG00000015315 22 0.884 - - - - - 0.884 - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
46. ADAM8 5 0.884 - - - - - 0.884 - - - - ADAM metallopeptidase domain 8, transcript variant X4
47. ENSGALG00000005026 ENSGALG00000005026 9 0.884 - - - - - 0.884 - - - -
48. COLEC11 ENSGALG00000037309 107 0.884 - - - - - 0.884 - - - - collectin subfamily member 11 [Source:NCBI gene;Acc:428649]
49. MGAT3 ENSGALG00000036743 5 0.884 - - - - - 0.884 - - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
50. PDE1C ENSGALG00000039935 16 0.884 - - - - - 0.884 - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
51. STK36 ENSGALG00000011371 6 0.884 - - - - - 0.884 - - - - serine/threonine kinase 36 [Source:HGNC Symbol;Acc:HGNC:17209]
52. ACA64 ACA64 62 0.884 - - - - - 0.884 - - - -
53. SLC7A10 ENSGALG00000004729 13 0.884 - - - - - 0.884 - - - - solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
54. PCSK1 ENSGALG00000014681 73 0.884 - - - - - 0.884 - - - - proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
55. CCKBR ENSGALG00000039837 23 0.884 - - - - - 0.884 - - - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
56. EHD4 ENSGALG00000008950 22 0.879 - - - - - 0.879 - - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
57. HOXA11 ENSGALG00000040021 3 0.874 - - - - - 0.874 - - - - homeobox A11 [Source:NCBI gene;Acc:395327]
58. EPG5 ENSGALG00000036259 71 0.871 - - - - - 0.871 - - - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
59. CAPN8 ENSGALG00000009382 8 0.869 - - - - - 0.869 - - - - calpain 8 [Source:HGNC Symbol;Acc:HGNC:1485]
60. MAT1A ENSGALG00000002479 66 0.863 - - - - - - - 0.863 - - methionine adenosyltransferase 1A [Source:NCBI gene;Acc:423628]
61. ENSGALG00000018358 ENSGALG00000018358 101 0.862 - - - - - 0.862 - - - -
62. TEKT3 ENSGALG00000001348 13 0.856 - - - - - 0.856 - - - - tektin 3 [Source:HGNC Symbol;Acc:HGNC:14293]
63. SYNPR ENSGALG00000007284 1368 0.848 - - - - - - 0.848 - - - synaptoporin [Source:NCBI gene;Acc:396359]
64. UNG ENSGALG00000021285 162 0.846 - - - - - 0.846 - - - - uracil DNA glycosylase [Source:NCBI gene;Acc:374010]
65. EDRF1 26 0.845 - - - - - 0.845 - - - - erythroid differentiation regulatory factor 1
66. GGMOXR1 GGMOXR1 6734 0.84 - - - - 0.840 - - - - -
67. LASP-2 LASP-2 4415 0.831 0.831 - - - - - - - - -
68. TANK ENSGALG00000011131 3382 0.831 - - - - - 0.831 - - - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
69. RAB37 ENSGALG00000027789 17 0.83 - - - - - 0.830 - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
70. TPM4 ENSGALG00000002563 15621 0.829 0.829 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
71. ENSGALG00000028707 ENSGALG00000028707 9 0.829 - - - - - 0.829 - - - -
72. MXD3 ENSGALG00000029109, ENSGALG00000046263 920 0.829 - - - - - 0.829 - - - - MAX dimerization protein 3, transcript variant X2
73. ASTN1 ENSGALG00000004472 855 0.824 - - - - - - 0.824 - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
74. EN1 ENSGALG00000042389 3051 0.821 - - - - 0.821 - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
75. CRYGN ENSGALG00000006189 28 0.821 - - - - - 0.821 - - - - crystallin gamma N [Source:NCBI gene;Acc:428406]
76. KIAA1407 KIAA1407 252 0.82 - - - - - 0.820 - - - -
77. SNTG2 ENSGALG00000016367 42 0.816 - - - - - 0.816 - - - - syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
78. BHMT ENSGALG00000004518 4700 0.811 - - - - - - 0.811 - - - betaine--homocysteine S-methyltransferase
79. HIVEP1 ENSGALG00000012739 352 0.809 - - - - - 0.809 - - - - human immunodeficiency virus type I enhancer binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4920]
80. TSPAN33 ENSGALG00000013528 832 0.808 - - - - - - - 0.808 - - tetraspanin 33, transcript variant X2
81. ZDHHC15 ENSGALG00000007800 24 0.808 - - - - - 0.808 - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
82. LRIG1 ENSGALG00000007483 19 0.806 - - - - - 0.806 - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
83. ANKIB1 ENSGALG00000031917 109 0.805 - - - - - 0.805 - - - - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
84. ACTN2 ENSGALG00000014463 1724 0.804 0.804 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
85. VAC14 ENSGALG00000002458 2887 0.795 - - - - - 0.795 - - - - Vac14, PIKFYVE complex component [Source:NCBI gene;Acc:415678]
86. CPZ ENSGALG00000030209 8822 0.791 - - - 0.791 - - - - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
87. BRT-1 BRT-1 26083 0.791 - - - - 0.791 - - - - -
88. H2AFX ENSGALG00000045705 7 0.789 - - - - - 0.789 - - - - H2A histone family member X
89. VWA8 ENSGALG00000016955 34 0.789 - - - - - 0.789 - - - - von Willebrand factor A domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29071]
90. GMEB1 ENSGALG00000038488 158 0.788 - - - - - - - 0.788 - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
91. TNNC1 ENSGALG00000001459 7110 0.788 0.788 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
92. PRKCE ENSGALG00000010000 99 0.788 - - - - - 0.788 - - - - protein kinase C epsilon, transcript variant X1
93. MYL2 ENSGALG00000004582 2245 0.785 0.785 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
94. MYBPC3 ENSGALG00000008148 315 0.785 0.785 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
95. MLNR ENSGALG00000017003 10 0.783 - - - - - - - 0.783 - - motilin receptor [Source:NCBI gene;Acc:428072]
96. ATP6V1A ENSGALG00000014800 4 0.783 - - - - - - - 0.783 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
97. CCDC39 ENSGALG00000021855 23 0.783 - - - - - - - 0.783 - - coiled-coil domain containing 39
98. C9orf152 C9orf152 3 0.783 - - - - - - - 0.783 - -
99. NARF ENSGALG00000001603 974 0.782 - - - - - 0.782 - - - - nuclear prelamin A recognition factor [Source:HGNC Symbol;Acc:HGNC:29916]
100. CHFR ENSGALG00000002180 17 0.782 - - - - - - - 0.782 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]

There are 87 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA