Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XBP1

Gene Name Gene ID Reads Annotation
XBP1 ENSGALG00000005796 14007 X-box binding protein 1 [Source:NCBI gene;Acc:416918]











Genes with expression patterns similar to XBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XBP1 ENSGALG00000005796 14007 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-box binding protein 1 [Source:NCBI gene;Acc:416918]
2. STRN3 ENSGALG00000040464 9045 1.601 - - - - - - 0.803 0.798 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
3. NUP37 ENSGALG00000012759 9985 1.601 - - - - - - 0.809 0.792 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
4. AZIN1 ENSGALG00000029295 11085 1.561 - - - - - - 0.817 0.744 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
5. MTAP ENSGALG00000008174 10976 1.555 - - - - - - 0.804 0.751 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
6. DSCR3 3583 1.553 - - - - - - 0.759 0.794 - - DSCR3 arrestin fold containing, transcript variant X1
7. BLMH ENSGALG00000004259 36907 1.55 - - - - - - 0.811 0.739 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
8. NDUFA12 ENSGALG00000011325 19807 1.545 - - - - - - 0.788 0.757 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
9. RRP1B ENSGALG00000035696 12309 1.544 - - - - - - 0.752 0.792 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
10. DAD1 ENSGALG00000035626 32604 1.539 - - - - - - 0.736 0.803 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
11. RCN2 ENSGALG00000039284 17848 1.535 - - - - - - 0.777 0.758 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
12. MRPL2 ENSGALG00000008597 16500 1.528 - - - - - - 0.766 0.762 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
13. PCNT ENSGALG00000007021 6428 1.511 - - - - - - 0.727 0.784 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
14. DCPS ENSGALG00000031143 10191 1.503 - - - - - - 0.701 0.802 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
15. SETD3 ENSGALG00000034802 4125 1.488 - - - - - - 0.746 0.742 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
16. CCNC ENSGALG00000015471 6497 1.488 - - - - - - 0.749 0.739 - - cyclin C [Source:NCBI gene;Acc:421791]
17. ANAPC16 ENSGALG00000004410 18001 1.487 - - - - - - 0.772 0.715 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
18. RFC1 ENSGALG00000014298 6516 1.486 - - - - - - 0.718 0.768 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
19. C1H11ORF73 C1H11ORF73 10071 1.482 - - - - - - 0.722 0.760 - -
20. WBSCR22 6082 1.477 - - - - - - 0.753 0.724 - - Williams-Beuren syndrome chromosome region 22
21. C11H16ORF80 C11H16ORF80 18673 1.476 - - - - - - 0.746 0.730 - -
22. RIOK2 ENSGALG00000015288 6280 1.467 - - - - - - 0.751 0.716 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
23. SPCS1 ENSGALG00000001655 7718 1.459 - - - - - - 0.701 0.758 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
24. DNM1L ENSGALG00000012929 6174 1.456 - - - - - - 0.726 0.730 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
25. HCCS ENSGALG00000005571 4939 1.455 - - - - - - 0.734 0.721 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
26. TM2D2 ENSGALG00000003356 7088 1.453 - - - - - - 0.730 0.723 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
27. ARFIP1 ENSGALG00000041361 7351 1.451 - - - - - - 0.737 0.714 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
28. HOXA5 ENSGALG00000025929 6231 1.447 - - - - - - 0.707 0.740 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
29. KDM3B ENSGALG00000007663 7189 1.441 - - - - - - 0.726 0.715 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
30. ADSS ENSGALG00000010702 7207 1.44 - - - - - - 0.723 0.717 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
31. ENSGALG00000026433 ENSGALG00000026433 14463 1.437 - - - - - - 0.727 0.710 - -
32. CENPK ENSGALG00000014753 12414 1.436 - - - - - - 0.714 0.722 - - centromere protein K [Source:NCBI gene;Acc:427162]
33. FAM63B 3793 1.435 - - - - - - 0.713 0.722 - - family with sequence similarity 63 member B
34. ENSGALG00000016887 ENSGALG00000016887 20086 0.902 - - - - - - 0.902 - - -
35. SRI ENSGALG00000008985 13865 0.901 - - - - - - 0.901 - - - sorcin [Source:NCBI gene;Acc:420538]
36. TMEM123 ENSGALG00000017185 6798 0.895 - - - - - - 0.895 - - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
37. DEK ENSGALG00000012684 14179 0.894 - - - - - - 0.894 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
38. Mar-05 Mar-05 6330 0.883 - - - - - - 0.883 - - -
39. HMGN3 ENSGALG00000015880 30919 0.881 - - - - - - 0.881 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
40. PCNP ENSGALG00000015330 15750 0.881 - - - - - - 0.881 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
41. SOD1 ENSGALG00000015844 35836 0.879 - - - - - - 0.879 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
42. PPP1CC ENSGALG00000004571 14748 0.879 - - - - - - 0.879 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
43. SLC12A4 ENSGALG00000034179 5674 0.876 - - - - - - - 0.876 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
44. SSBP1 ENSGALG00000012876 34256 0.875 - - - - - - 0.875 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
45. NEDD1 ENSGALG00000031699 3634 0.875 - - - - - - - 0.875 - - neural precursor cell expressed, developmentally down-regulated 1 [Source:NCBI gene;Acc:417922]
46. UQCRC2 ENSGALG00000002490 23477 0.863 - - - - - - 0.863 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
47. NDUFS7 ENSGALG00000009703 19674 0.861 - - - - - - 0.861 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
48. EIF2S1 ENSGALG00000009565 63906 0.86 - - - - - - 0.860 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
49. SEC11A ENSGALG00000037553 32123 0.856 - - - - - - 0.856 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
50. PDCD10 ENSGALG00000009477 7061 0.854 - - - - - - 0.854 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
51. TPMT ENSGALG00000012687 9537 0.853 - - - - - - 0.853 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
52. PDIA6 ENSGALG00000016447 51308 0.85 - - - - - - 0.850 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
53. SRBD1 ENSGALG00000009990 4568 0.849 - - - - - - - 0.849 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
54. PPP1R7 ENSGALG00000031766 22187 0.849 - - - - - - 0.849 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
55. MMD ENSGALG00000003078 21311 0.847 - - - - - - 0.847 - - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
56. COMMD1 ENSGALG00000008931 12202 0.847 - - - - - - 0.847 - - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
57. PPP2R5C ENSGALG00000029996 5759 0.845 - - - - - - 0.845 - - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
58. EIF3B ENSGALG00000040999 49971 0.845 - - - - - - 0.845 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
59. PPIH ENSGALG00000004874 25558 0.844 - - - - - - 0.844 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
60. HMGB2 ENSGALG00000010745 89235 0.84 - - - - - - 0.840 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
61. TRABD ENSGALG00000030705 6577 0.838 - - - - - - 0.838 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
62. IARS ENSGALG00000004813 12936 0.837 - - - - - - - 0.837 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
63. NDUFS8 ENSGALG00000040173 24745 0.835 - - - - - - 0.835 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
64. TXNDC12 ENSGALG00000010569 13822 0.835 - - - - - - 0.835 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
65. LDB2 ENSGALG00000014485 22490 0.835 - - - - - - 0.835 - - - LIM domain binding 2 [Source:NCBI gene;Acc:395631]
66. SLMO2 SLMO2 9207 0.835 - - - - - - - 0.835 - -
67. NDUFA1 ENSGALG00000008613 20410 0.834 - - - - - - 0.834 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
68. THYN1 ENSGALG00000001529 9423 0.832 - - - - - - 0.832 - - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
69. PDIA4 ENSGALG00000043006 22992 0.832 - - - - - - 0.832 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
70. NAA38 ENSGALG00000045783 11229 0.831 - - - - - - 0.831 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
71. HSCB ENSGALG00000005706 12953 0.831 - - - - - - - 0.831 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
72. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.83 - - - - - - 0.830 - - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
73. ZC3H14 ENSGALG00000010622 7024 0.829 - - - - - - 0.829 - - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
74. CSE1L ENSGALG00000004707 20653 0.829 - - - - - - 0.829 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
75. DUT ENSGALG00000038032 34659 0.828 - - - - - - 0.828 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
76. ENSGALG00000009044 ENSGALG00000009044 14492 0.827 - - - - - - 0.827 - - -
77. HMGN1 ENSGALG00000016067 17375 0.826 - - - - - - 0.826 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
78. PARP1 ENSGALG00000009228 39433 0.824 - - - - - - 0.824 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
79. EBAG9 ENSGALG00000036293 10058 0.824 - - - - - - - 0.824 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
80. ENSGALG00000001861 ENSGALG00000001861 10150 0.824 - - - - - - - 0.824 - -
81. MRPL20 ENSGALG00000001542 28764 0.823 - - - - - - 0.823 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
82. UQCR10 ENSGALG00000008066 52968 0.823 - - - - - - 0.823 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
83. PCM1 ENSGALG00000013602 6347 0.822 - - - - - - - 0.822 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
84. SVIL ENSGALG00000007331 12032 0.821 - - - - - - 0.821 - - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
85. DNAJB11 ENSGALG00000006564 9353 0.821 - - - - - - - 0.821 - - DnaJ heat shock protein family (Hsp40) member B11
86. FKBP12 FKBP12 64317 0.82 - - - - - - 0.820 - - -
87. LARS ENSGALG00000007494 13966 0.82 - - - - - - - 0.820 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
88. WIPI2 ENSGALG00000004557 4961 0.82 - - - - - - - 0.820 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
89. MORF4L1 ENSGALG00000008146 29940 0.82 - - - - - - 0.820 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
90. ANAPC7 ENSGALG00000003826 5484 0.818 - - - - - - - 0.818 - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
91. CLINT1 ENSGALG00000003702 11269 0.818 - - - - - - 0.818 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
92. FAM18B1 ENSGALG00000001335 5177 0.818 - - - - - - - 0.818 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
93. PRIM2 ENSGALG00000016278 5160 0.817 - - - - - - - 0.817 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
94. DKC1 ENSGALG00000005054 30350 0.817 - - - - - - 0.817 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
95. EIF4A2 ENSGALG00000008684 58507 0.815 - - - - - - 0.815 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
96. AATF ENSGALG00000005420 6501 0.815 - - - - - - 0.815 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
97. SASS6 ENSGALG00000005302 4029 0.815 - - - - - - - 0.815 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
98. NUTF2 ENSGALG00000001602 32832 0.815 - - - - - - 0.815 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
99. NIP7 ENSGALG00000000650 23932 0.815 - - - - - - - 0.815 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
100. MSMO1 ENSGALG00000009560 6928 0.814 - - - - - - - 0.814 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]

There are 547 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA