Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for WHSC1

Gene Name Gene ID Reads Annotation
WHSC1 1712 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14











Genes with expression patterns similar to WHSC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. WHSC1 1712 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
2. QSER1 ENSGALG00000012030 4490 2.544 - - 0.878 - - - 0.842 - - 0.824 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
3. ERCC6 ENSGALG00000006254 3452 2.51 - - 0.829 - - - - - 0.782 0.899 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
4. UBN1 ENSGALG00000031416 2848 2.476 - - 0.888 - 0.792 - - - - 0.796 ubinuclein 1 [Source:NCBI gene;Acc:416398]
5. ADIPOR2 ENSGALG00000035533 6523 2.382 - - 0.842 - - - 0.730 - - 0.810 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
6. TP53BP1 ENSGALG00000042201 708 1.972 - - - - - - 0.988 - - 0.984 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
7. PTDSS2 ENSGALG00000004300 682 1.967 - - 0.980 - - - 0.987 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
8. OSBPL1A ENSGALG00000015086 2702 1.923 - - - - - - 0.961 - - 0.962 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
9. HYAL3 ENSGALG00000029000 712 1.915 - - 0.935 - - - - - - 0.980 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
10. ASAP2 ENSGALG00000016419 1393 1.912 - - - - - - 0.922 - - 0.990 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
11. FREM3 ENSGALG00000020561 1824 1.904 - - - - - - 0.926 - - 0.978 FRAS1 related extracellular matrix 3
12. SMC4 ENSGALG00000009553 15715 1.895 - - 0.934 - - - - - - 0.961 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
13. HYAL1 ENSGALG00000000785 1778 1.887 - - 0.917 - - - 0.970 - - - hyaluronoglucosaminidase 1, transcript variant X3
14. CNTRL ENSGALG00000001513 1773 1.884 - - 0.894 - - - - - - 0.990 centriolin [Source:NCBI gene;Acc:417121]
15. PRPF38B ENSGALG00000001972 2009 1.851 - - 0.914 - - - - - - 0.937 pre-mRNA processing factor 38B
16. ABHD13 ENSGALG00000016853 4975 1.841 - - 0.893 - - - 0.948 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
17. ATP6V0C ENSGALG00000009229 125870 1.831 - - 0.868 - - - - - - 0.963 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
18. CCNA2 ENSGALG00000011881 2574 1.828 - - 0.907 - - - - - - 0.921 cyclin A2 [Source:NCBI gene;Acc:396172]
19. SLK ENSGALG00000008318 2220 1.826 - - 0.953 - - - - - - 0.873 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
20. TAF1B ENSGALG00000016437 2318 1.818 - - 0.914 - - - 0.904 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
21. COG7 ENSGALG00000006156 4072 1.818 - - 0.914 - - - 0.904 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
22. CPT2 ENSGALG00000010681 3211 1.814 - - 0.840 - - - - - - 0.974 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
23. CAMSAP1 ENSGALG00000001692 2617 1.809 - - 0.940 - - - - - - 0.869 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
24. BEND5 ENSGALG00000010505 3298 1.805 - - 0.874 - - - 0.931 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
25. IWS1 ENSGALG00000001803 2305 1.803 - - 0.830 - - - 0.973 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
26. SPDL1 ENSGALG00000001942 4403 1.802 - - 0.835 - - - - - - 0.967 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
27. TWSG1 ENSGALG00000008400 1869 1.799 - - 0.901 - - - - - - 0.898 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
28. NAA30 ENSGALG00000012098 4681 1.799 - - 0.876 - - - - - - 0.923 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
29. DDX42 ENSGALG00000000581 8780 1.799 - - 0.888 - - - 0.911 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
30. TMLHE ENSGALG00000007443 3619 1.795 - - 0.843 - - - - - - 0.952 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
31. GTF2E1 ENSGALG00000042320 7712 1.79 - - 0.941 - - - - - - 0.849 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
32. C9orf85 ENSGALG00000026001 4110 1.784 - - 0.840 - - - 0.944 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
33. SLC39A6 ENSGALG00000013209 1754 1.782 - - 0.865 - - - - - - 0.917 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
34. RAD50 ENSGALG00000006794 4308 1.772 - - 0.803 - - - - - - 0.969 RAD50 double strand break repair protein, transcript variant X4
35. WBP4 ENSGALG00000016949 5858 1.768 - - 0.925 - - - - - - 0.843 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
36. IFT81 ENSGALG00000003854 2534 1.759 - - 0.970 - - - 0.789 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
37. UBE2E3 ENSGALG00000020793 9517 1.757 - - 0.927 - - - - - - 0.830 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
38. HDAC2 ENSGALG00000014991 23458 1.752 - - 0.783 - - - - - - 0.969 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
39. PANK1 ENSGALG00000006431 2910 1.752 - - 0.860 - - - 0.892 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
40. BZW2 ENSGALG00000010809 29213 1.752 - - 0.851 - - - - - - 0.901 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
41. SP3 ENSGALG00000031796 8997 1.752 - - 0.902 - - - - - - 0.850 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
42. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.744 - - 0.899 - - - 0.845 - - -
43. PWP1 ENSGALG00000012631 10536 1.743 - - - - - - 0.840 - - 0.903 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
44. MYEOV2 MYEOV2 5155 1.735 - - - - - - 0.875 - - 0.860
45. AGGF1 ENSGALG00000004311 3011 1.734 - - 0.755 - - - - - - 0.979 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
46. FZD6 ENSGALG00000030626 3336 1.734 - - 0.829 - - - - - - 0.905 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
47. SLC12A4 ENSGALG00000034179 5674 1.731 - - 0.854 - - - - - - 0.877 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
48. SZT2 ENSGALG00000028561 255 1.729 - - 0.981 - 0.748 - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
49. RPL26 RPL26 343071 1.729 - - 0.886 - - - - - - 0.843
50. TIAR TIAR 2471 1.724 - - 0.902 - - - - - - 0.822
51. RAD18 ENSGALG00000008368 7214 1.717 - - 0.837 - - - - - - 0.880 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
52. NUBP1 ENSGALG00000007241 3791 1.717 - - 0.913 - - - - - - 0.804 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
53. HNRNPLL ENSGALG00000008504 14719 1.716 - - 0.894 - - - - - - 0.822 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
54. CKAP2 ENSGALG00000017025 25020 1.707 - - 0.750 - - - - - - 0.957 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
55. SMC5 ENSGALG00000015118 1799 1.707 - - 0.867 - - - - - - 0.840 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
56. FECH ENSGALG00000038461 3491 1.706 - - 0.829 - - - - - - 0.877 ferrochelatase [Source:NCBI gene;Acc:374020]
57. RBBP8 ENSGALG00000014982 3255 1.706 - - 0.889 - - - - - - 0.817 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
58. KIF11 ENSGALG00000030597 5528 1.703 - - 0.746 - - - - - - 0.957 kinesin family member 11 [Source:NCBI gene;Acc:423809]
59. BTG1L ENSGALG00000004676 2293 1.701 - - 0.913 - - - - - - 0.788 protein BTG1-like
60. RBX1 ENSGALG00000011993 26090 1.7 - - 0.865 - - - - - - 0.835 ring-box 1 [Source:NCBI gene;Acc:418001]
61. NDC80 ENSGALG00000014801 3237 1.695 - - 0.858 - - - - - - 0.837 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
62. ZC3H11A ENSGALG00000000541 2712 1.69 - - 0.910 - - - - - - 0.780 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
63. SLC37A3 ENSGALG00000012849 836 1.681 - - 0.958 - - - - - 0.723 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
64. RIN2 ENSGALG00000008457 2661 1.672 - - - - - - - 0.777 - 0.895 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
65. CASP8AP2 ENSGALG00000015611 5657 1.665 - - - - - - 0.725 - - 0.940 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
66. PQLC1 ENSGALG00000043150 3133 1.663 - - 0.778 - - - 0.885 - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
67. QDPR ENSGALG00000030070 6953 1.662 - - 0.728 - - - - - - 0.934 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
68. ETFDH ENSGALG00000009442 7671 1.658 - - 0.759 - - - - - - 0.899 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
69. HSPE1 ENSGALG00000009070 87567 1.648 - - 0.721 - - - - - - 0.927 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
70. ENSGALG00000028992 ENSGALG00000028992 185077 1.647 - - 0.770 - - - - - - 0.877
71. TPX2 ENSGALG00000006267 26087 1.646 - - 0.745 - - - - - - 0.901 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
72. 5 5 4209 1.646 - - - - - - 0.719 - - 0.927
73. FTD FTD 3041 1.642 - - 0.870 - - - - - - 0.772
74. TCOF1 ENSGALG00000005535 24554 1.614 - - 0.712 - - - - - - 0.902 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
75. EAPP ENSGALG00000010007 5080 1.613 - - 0.807 - - - - - - 0.806 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
76. PDCL3 ENSGALG00000016772 14897 1.61 - - 0.774 - - - 0.836 - - - phosducin like 3 [Source:NCBI gene;Acc:418709]
77. ZCCHC8 ENSGALG00000004486 3201 1.602 - - 0.853 - - - 0.749 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
78. GPX8 ENSGALG00000026704 4497 1.601 - - - - - - 0.723 - - 0.878 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
79. TBPL1 ENSGALG00000013981 3710 1.595 - - - - - - 0.712 - - 0.883 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
80. HBXIP HBXIP 8637 1.585 - - 0.718 - - - - - - 0.867
81. MYCBP2 ENSGALG00000016915 2374 1.585 - - 0.828 - - - - - - 0.757 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
82. UFL1 ENSGALG00000015580 3845 1.583 - - 0.791 - - - 0.792 - - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
83. FOXK2 ENSGALG00000001577 6346 1.582 - - 0.821 - - - 0.761 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
84. GID8 ENSGALG00000005700 3992 1.581 - - 0.794 - - - - - - 0.787 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
85. LGALS1 ENSGALG00000012420 13993 1.572 - - 0.868 - - - - - - 0.704 galectin 1 [Source:NCBI gene;Acc:396491]
86. RPL22 ENSGALG00000000719 74238 1.556 - - - - - - 0.745 - - 0.811 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
87. PTPN12 9302 1.555 - - 0.799 - - - 0.756 - - - protein tyrosine phosphatase, non-receptor type 12
88. CHMP4B ENSGALG00000002095 17422 1.552 - - 0.807 - - - - - - 0.745 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
89. FBXO28 ENSGALG00000009331 2871 1.539 - - - - - - 0.826 - 0.713 - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
90. TBX3 ENSGALG00000036043 2888 1.536 - - 0.758 - - - - - - 0.778 T-box 3 [Source:NCBI gene;Acc:374202]
91. SMNDC1 ENSGALG00000008561 14415 1.535 - - 0.715 - - - - - - 0.820 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
92. WDR12 ENSGALG00000008470 7654 1.531 - - 0.748 - - - 0.783 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
93. VAPB ENSGALG00000007549 15511 1.53 - - 0.734 - - - - - - 0.796 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
94. TPM4 ENSGALG00000002563 15621 1.529 - - 0.785 - - - - - - 0.744 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
95. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.523 - - 0.801 - - - 0.722 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
96. BCL9 ENSGALG00000037655 4620 1.494 - - - - - - 0.709 - - 0.785 B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
97. FUBP1 ENSGALG00000008939 2850 1.49 - - - - - - - - 0.728 0.762 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
98. GEMIN6 ENSGALG00000013821 5589 1.482 - - 0.744 - - 0.738 - - - - gem nuclear organelle associated protein 6 [Source:NCBI gene;Acc:426266]
99. CCNB2 ENSGALG00000004161 50324 1.43 - - 0.720 - - - - - - 0.710 cyclin B2 [Source:NCBI gene;Acc:415400]
100. ITSN2 ENSGALG00000016504 651 0.992 - - - - - - - - - 0.992 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]

There are 1134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA