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Results for Vta1

Gene Name Gene ID Reads Annotation
Vta1 ENSMUSG00000019868 1987 vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]







Genes with expression patterns similar to Vta1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vta1 ENSMUSG00000019868 1987 6 1.000 1.000 1.000 1.000 1.000 1.000 vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]
2. Rtn3 ENSMUSG00000024758 11055 2.534 0.773 0.894 - - - 0.867 reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
3. Rnf31 ENSMUSG00000047098 530 1.894 - 0.965 - - - 0.929 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
4. Zc3h7a ENSMUSG00000037965 1775 1.882 - 0.965 - - - 0.917 zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
5. Dnm2 ENSMUSG00000033335 1247 1.862 - 0.969 - - - 0.893 dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
6. Mon2 ENSMUSG00000034602 2162 1.821 - 0.949 - - - 0.872 MON2 homolog, regulator of endosome to Golgi trafficking [Source:MGI Symbol;Acc:MGI:1914324]
7. Tma7 ENSMUSG00000091537 17398 1.747 - 0.844 - - - 0.903 translational machinery associated 7 [Source:MGI Symbol;Acc:MGI:1913417]
8. Wbp1 ENSMUSG00000030035 3480 1.741 - 0.876 - - - 0.865 WW domain binding protein 1 [Source:MGI Symbol;Acc:MGI:104710]
9. Rpn1 ENSMUSG00000030062 7082 1.737 - 0.861 - - - 0.876 ribophorin I [Source:MGI Symbol;Acc:MGI:98084]
10. Faf1 ENSMUSG00000010517 1671 1.712 0.760 0.952 - - - - Fas-associated factor 1 [Source:MGI Symbol;Acc:MGI:109419]
11. Nemf ENSMUSG00000020982 2930 1.71 - 0.859 - - - 0.851 nuclear export mediator factor [Source:MGI Symbol;Acc:MGI:1918305]
12. Ccdc104 Ccdc104 1111 1.706 0.775 - - - - 0.931
13. Zfand5 ENSMUSG00000024750 6972 1.651 - 0.932 - - - 0.719 zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
14. Snrpc ENSMUSG00000024217 5601 1.587 - 0.775 - - - 0.812 U1 small nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:109489]
15. Ckap2 ENSMUSG00000037725 3722 1.572 0.717 0.855 - - - - cytoskeleton associated protein 2 [Source:MGI Symbol;Acc:MGI:1931797]
16. Ube2d3 ENSMUSG00000078578 9371 1.553 - 0.744 - - - 0.809 ubiquitin-conjugating enzyme E2D 3 [Source:MGI Symbol;Acc:MGI:1913355]
17. Zfp532 ENSMUSG00000042439 6834 1.546 - 0.750 - - - 0.796 zinc finger protein 532 [Source:MGI Symbol;Acc:MGI:3036282]
18. Sf3b5 ENSMUSG00000078348 4648 1.483 0.736 - - - - 0.747 splicing factor 3b, subunit 5 [Source:MGI Symbol;Acc:MGI:1913375]
19. Dhx9 ENSMUSG00000042699 8779 1.481 0.765 - - - - 0.716 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
20. Svil ENSMUSG00000024236 6582 1.473 - 0.772 - - - 0.701 supervillin [Source:MGI Symbol;Acc:MGI:2147319]
21. Eif3b ENSMUSG00000056076 7411 1.466 - 0.723 - - - 0.743 eukaryotic translation initiation factor 3, subunit B [Source:MGI Symbol;Acc:MGI:106478]
22. Ctsb ENSMUSG00000021939 6295 1.455 - 0.739 - - - 0.716 cathepsin B [Source:MGI Symbol;Acc:MGI:88561]
23. Hibch ENSMUSG00000041426 755 0.975 - 0.975 - - - - 3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
24. Spag9 ENSMUSG00000020859 2554 0.974 - 0.974 - - - - sperm associated antigen 9 [Source:MGI Symbol;Acc:MGI:1918084]
25. Cdh2 ENSMUSG00000024304 2594 0.973 - 0.973 - - - - cadherin 2 [Source:MGI Symbol;Acc:MGI:88355]
26. Psma6 ENSMUSG00000021024 3072 0.973 - 0.973 - - - - proteasome (prosome, macropain) subunit, alpha type 6 [Source:MGI Symbol;Acc:MGI:1347006]
27. Msantd3 ENSMUSG00000039693 1503 0.973 - 0.973 - - - - Myb/SANT-like DNA-binding domain containing 3 [Source:MGI Symbol;Acc:MGI:1913915]
28. Ccnd3 ENSMUSG00000034165 817 0.972 - 0.972 - - - - cyclin D3 [Source:MGI Symbol;Acc:MGI:88315]
29. Letm1 ENSMUSG00000005299 1677 0.971 - 0.971 - - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1932557]
30. 1700093K21Rik ENSMUSG00000020286 497 0.97 - 0.970 - - - - RIKEN cDNA 1700093K21 gene [Source:MGI Symbol;Acc:MGI:1914608]
31. Six1 ENSMUSG00000051367 745 0.97 - 0.970 - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
32. Txndc15 ENSMUSG00000021497 1081 0.97 - 0.970 - - - - thioredoxin domain containing 15 [Source:MGI Symbol;Acc:MGI:1916922]
33. Snrpd3 ENSMUSG00000020180 2205 0.97 - 0.970 - - - - small nuclear ribonucleoprotein D3 [Source:MGI Symbol;Acc:MGI:1914582]
34. Gm13342 ENSMUSG00000082516 112 0.969 - 0.969 - - - - predicted gene 13342 [Source:MGI Symbol;Acc:MGI:3650441]
35. Kdm3b ENSMUSG00000038773 1607 0.969 - 0.969 - - - - KDM3B lysine (K)-specific demethylase 3B [Source:MGI Symbol;Acc:MGI:1923356]
36. Hiatl1 Hiatl1 766 0.969 - 0.969 - - - -
37. Rpl27a ENSMUSG00000046364 2278 0.969 - 0.969 - - - - ribosomal protein L27A [Source:MGI Symbol;Acc:MGI:1347076]
38. Rpl35a ENSMUSG00000060636 411 0.969 - 0.969 - - - - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
39. Trim12a ENSMUSG00000066258 403 0.968 - 0.968 - - - - tripartite motif-containing 12A [Source:MGI Symbol;Acc:MGI:1923931]
40. Trp53bp1 ENSMUSG00000043909 1824 0.968 - - - - - 0.968 transformation related protein 53 binding protein 1 [Source:MGI Symbol;Acc:MGI:1351320]
41. Cyp2j6 ENSMUSG00000052914 325 0.968 - 0.968 - - - - cytochrome P450, family 2, subfamily j, polypeptide 6 [Source:MGI Symbol;Acc:MGI:1270148]
42. Ptpru ENSMUSG00000028909 644 0.968 - 0.968 - - - - protein tyrosine phosphatase, receptor type, U [Source:MGI Symbol;Acc:MGI:1321151]
43. Golga3 ENSMUSG00000029502 800 0.968 - 0.968 - - - - golgi autoantigen, golgin subfamily a, 3 [Source:MGI Symbol;Acc:MGI:96958]
44. Coch ENSMUSG00000020953 154 0.968 - 0.968 - - - - cochlin [Source:MGI Symbol;Acc:MGI:1278313]
45. Tfip11 ENSMUSG00000029345 399 0.968 - 0.968 - - - - tuftelin interacting protein 11 [Source:MGI Symbol;Acc:MGI:1930075]
46. Sirt3 ENSMUSG00000025486 327 0.968 - 0.968 - - - - sirtuin 3 [Source:MGI Symbol;Acc:MGI:1927665]
47. Pole2 ENSMUSG00000020974 1305 0.968 - 0.968 - - - - polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
48. Haus1 ENSMUSG00000041840, ENSMUSG00000115884 877 0.968 - 0.968 - - - - HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]
49. Gm24056 ENSMUSG00000089242 346 0.968 - 0.968 - - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
50. Rad9b ENSMUSG00000038569 151 0.967 - 0.967 - - - - RAD9 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2385231]
51. Ranbp6 ENSMUSG00000074909 552 0.967 - 0.967 - - - - RAN binding protein 6 [Source:MGI Symbol;Acc:MGI:2683212]
52. Nxt2 ENSMUSG00000042271 400 0.967 - 0.967 - - - - nuclear transport factor 2-like export factor 2 [Source:MGI Symbol;Acc:MGI:2147914]
53. Gchfr ENSMUSG00000046814 266 0.967 - 0.967 - - - - GTP cyclohydrolase I feedback regulator [Source:MGI Symbol;Acc:MGI:2443977]
54. H2-Q4 ENSMUSG00000035929 157 0.967 - 0.967 - - - - histocompatibility 2, Q region locus 4 [Source:MGI Symbol;Acc:MGI:95933]
55. Rgs18 ENSMUSG00000026357 156 0.967 - 0.967 - - - - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
56. 3830406C13Rik ENSMUSG00000033111 586 0.967 - 0.967 - - - - RIKEN cDNA 3830406C13 gene [Source:MGI Symbol;Acc:MGI:1917937]
57. Cradd ENSMUSG00000045867 347 0.967 - 0.967 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
58. Acsf3 ENSMUSG00000015016 692 0.967 - 0.967 - - - - acyl-CoA synthetase family member 3 [Source:MGI Symbol;Acc:MGI:2182591]
59. Vav3 ENSMUSG00000033721 527 0.967 - 0.967 - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
60. Wipi1 ENSMUSG00000041895 3789 0.967 - 0.967 - - - - WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
61. Sema4g ENSMUSG00000025207 494 0.966 - 0.966 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:MGI Symbol;Acc:MGI:1347047]
62. Zfp937 ENSMUSG00000060336 300 0.966 - 0.966 - - - - zinc finger protein 937 [Source:MGI Symbol;Acc:MGI:3644476]
63. Efnb1 ENSMUSG00000031217 2777 0.966 - 0.966 - - - - ephrin B1 [Source:MGI Symbol;Acc:MGI:102708]
64. Gnb1l ENSMUSG00000000884 358 0.966 - 0.966 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1-like [Source:MGI Symbol;Acc:MGI:1338057]
65. Cnst ENSMUSG00000038949 727 0.966 - 0.966 - - - - consortin, connexin sorting protein [Source:MGI Symbol;Acc:MGI:2445141]
66. Zfp456 ENSMUSG00000078995 125 0.966 - 0.966 - - - - zinc finger protein 456 [Source:MGI Symbol;Acc:MGI:3040694]
67. Vmac ENSMUSG00000054723 731 0.966 - 0.966 - - - - vimentin-type intermediate filament associated coiled-coil protein [Source:MGI Symbol;Acc:MGI:2146912]
68. Thbs1 ENSMUSG00000040152 1713 0.965 - 0.965 - - - - thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737]
69. Espn ENSMUSG00000028943 238 0.965 - 0.965 - - - - espin [Source:MGI Symbol;Acc:MGI:1861630]
70. Gm26809 ENSMUSG00000097815 449 0.965 - 0.965 - - - - predicted gene, 26809 [Source:MGI Symbol;Acc:MGI:5477303]
71. Gemin2 ENSMUSG00000060121 858 0.965 - 0.965 - - - - gem nuclear organelle associated protein 2 [Source:MGI Symbol;Acc:MGI:1913853]
72. Inpp4a ENSMUSG00000026113 738 0.965 - 0.965 - - - - inositol polyphosphate-4-phosphatase, type I [Source:MGI Symbol;Acc:MGI:1931123]
73. Gm16378 ENSMUSG00000095762 683 0.965 - 0.965 - - - - predicted gene 16378 [Source:MGI Symbol;Acc:MGI:3646886]
74. Gpc4 ENSMUSG00000031119 424 0.965 - 0.965 - - - - glypican 4 [Source:MGI Symbol;Acc:MGI:104902]
75. 1110001J03Rik 2404 0.965 - 0.965 - - - - RIKEN cDNA 1110001J03 gene
76. Cdk5r1 ENSMUSG00000048895 2376 0.964 - 0.964 - - - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
77. Tmem40 ENSMUSG00000059900 110 0.964 - 0.964 - - - - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
78. Med18 ENSMUSG00000066042 841 0.964 - 0.964 - - - - mediator complex subunit 18 [Source:MGI Symbol;Acc:MGI:1914469]
79. 1110001A16Rik 1110001A16Rik 806 0.963 - 0.963 - - - -
80. Slc20a2 ENSMUSG00000037656 778 0.963 - 0.963 - - - - solute carrier family 20, member 2 [Source:MGI Symbol;Acc:MGI:97851]
81. Srd5a3 ENSMUSG00000029233 1029 0.962 - 0.962 - - - - steroid 5 alpha-reductase 3 [Source:MGI Symbol;Acc:MGI:1930252]
82. Cdc42ep5 ENSMUSG00000063838 592 0.962 - 0.962 - - - - CDC42 effector protein (Rho GTPase binding) 5 [Source:MGI Symbol;Acc:MGI:1929745]
83. Card10 ENSMUSG00000033170 832 0.962 - 0.962 - - - - caspase recruitment domain family, member 10 [Source:MGI Symbol;Acc:MGI:2146012]
84. Mtfp1 ENSMUSG00000004748 496 0.961 - 0.961 - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
85. Trp53inp1 ENSMUSG00000028211 686 0.961 - 0.961 - - - - transformation related protein 53 inducible nuclear protein 1 [Source:MGI Symbol;Acc:MGI:1926609]
86. Mccc1 ENSMUSG00000027709 688 0.961 - 0.961 - - - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [Source:MGI Symbol;Acc:MGI:1919289]
87. Prpf3 ENSMUSG00000015748 1936 0.96 - 0.960 - - - - pre-mRNA processing factor 3 [Source:MGI Symbol;Acc:MGI:1918017]
88. Gm26764 ENSMUSG00000097667 599 0.96 - 0.960 - - - - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
89. Prkaa1 ENSMUSG00000050697 591 0.96 - 0.960 - - - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
90. Gltscr1l 626 0.96 - 0.960 - - - - GLTSCR1-like, transcript variant X8
91. Sptlc2 ENSMUSG00000021036 1431 0.959 - 0.959 - - - - serine palmitoyltransferase, long chain base subunit 2 [Source:MGI Symbol;Acc:MGI:108074]
92. Trmt1 ENSMUSG00000001909 1649 0.959 - 0.959 - - - - tRNA methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1289155]
93. Ap2b1 ENSMUSG00000035152 2023 0.959 - 0.959 - - - - adaptor-related protein complex 2, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1919020]
94. Dnpep ENSMUSG00000026209 1821 0.958 - - - - - 0.958 aspartyl aminopeptidase [Source:MGI Symbol;Acc:MGI:1278328]
95. Pde4d ENSMUSG00000021699 821 0.958 - 0.958 - - - - phosphodiesterase 4D, cAMP specific [Source:MGI Symbol;Acc:MGI:99555]
96. Ddx28 ENSMUSG00000045538 608 0.958 - 0.958 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
97. Spast ENSMUSG00000024068 2727 0.958 - 0.958 - - - - spastin [Source:MGI Symbol;Acc:MGI:1858896]
98. Pcca ENSMUSG00000041650 1407 0.957 - 0.957 - - - - propionyl-Coenzyme A carboxylase, alpha polypeptide [Source:MGI Symbol;Acc:MGI:97499]
99. Hps3 ENSMUSG00000027615 596 0.957 - 0.957 - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
100. Sucla2 ENSMUSG00000022110 2990 0.957 - 0.957 - - - - succinate-Coenzyme A ligase, ADP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306775]

There are 632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA