Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vsx2

Gene Name Gene ID Reads Annotation
Vsx2 ENSMUSG00000021239 34 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]







Genes with expression patterns similar to Vsx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx2 ENSMUSG00000021239 34 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
2. Chi3l7 Chi3l7 3 2.455 0.815 0.711 0.929 - - -
3. Foxn4 ENSMUSG00000042002 22 2.358 - - 0.929 0.706 0.723 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
4. Wdr66 ENSMUSG00000029442 10 1.86 - - 0.929 - - 0.931 WD repeat domain 66 [Source:MGI Symbol;Acc:MGI:1918495]
5. A930009A15Rik ENSMUSG00000092210 2 1.86 - - 0.929 - - 0.931 RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
6. Sox14 ENSMUSG00000053747 13 1.723 - - 0.929 0.794 - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
7. Slc6a5 ENSMUSG00000039728 13 1.722 - - 0.929 0.793 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
8. Hes2 ENSMUSG00000028940 7 1.715 - - 0.929 - 0.786 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
9. Vsx1 ENSMUSG00000033080 23 1.7 - - 0.929 - 0.771 - visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
10. Nkx1-2 ENSMUSG00000048528 9 1.666 - - 0.929 0.737 - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
11. Gm12186 ENSMUSG00000084153 4 1.653 - - 0.929 0.724 - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
12. Nek11 ENSMUSG00000035032 4 1.653 - - 0.929 0.724 - - NIMA (never in mitosis gene a)-related expressed kinase 11 [Source:MGI Symbol;Acc:MGI:2442276]
13. 1700003M02Rik 1700003M02Rik 8 1.642 - 0.711 - - - 0.931
14. 1110002J07Rik ENSMUSG00000097134 1 1.64 - 0.711 0.929 - - - RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
15. Gm15687 ENSMUSG00000086643 3 1.64 - 0.711 0.929 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
16. Rhov ENSMUSG00000034226 16 1.474 - 0.711 - - 0.763 - ras homolog family member V [Source:MGI Symbol;Acc:MGI:2444227]
17. Sncg ENSMUSG00000023064 1702 1.468 - - - - 0.720 0.748 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
18. BC064078 ENSMUSG00000087150 55 1.465 - - 0.749 - 0.716 - cDNA sequence BC064078 [Source:MGI Symbol;Acc:MGI:3040692]
19. Prdm8 ENSMUSG00000035456 310 1.456 - - 0.723 0.733 - - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
20. RP24-129O14.1 RP24-129O14.1 4 0.962 0.962 - - - - -
21. Wdr93 ENSMUSG00000039099 10 0.962 0.962 - - - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
22. 5730457N03Rik 5730457N03Rik 14 0.948 - - 0.948 - - -
23. Klrc2 ENSMUSG00000052736 6 0.935 - - - - - 0.935 killer cell lectin-like receptor subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:1336162]
24. Gm15825 ENSMUSG00000089787 24 0.931 - - - - - 0.931 predicted gene 15825 [Source:MGI Symbol;Acc:MGI:3801887]
25. Iglon5 ENSMUSG00000013367 30 0.931 - - - - - 0.931 IgLON family member 5 [Source:MGI Symbol;Acc:MGI:2686277]
26. Gm11476 ENSMUSG00000085596 1 0.931 - - - - - 0.931 predicted gene 11476 [Source:MGI Symbol;Acc:MGI:3705135]
27. Gm15261 ENSMUSG00000087201 9 0.931 - - - - - 0.931 predicted gene 15261 [Source:MGI Symbol;Acc:MGI:3705201]
28. Trim61 ENSMUSG00000109718 16 0.931 - - - - - 0.931 tripartite motif-containing 61 [Source:MGI Symbol;Acc:MGI:2387432]
29. Aldh8a1 ENSMUSG00000037542 5 0.931 - - - - - 0.931 aldehyde dehydrogenase 8 family, member A1 [Source:MGI Symbol;Acc:MGI:2653900]
30. Gm13620 ENSMUSG00000086603 1 0.931 - - - - - 0.931 predicted gene 13620 [Source:MGI Symbol;Acc:MGI:3650077]
31. Gm26604 ENSMUSG00000097079 11 0.931 - - - - - 0.931 predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
32. Glod5 ENSMUSG00000031163 3 0.931 - - - - - 0.931 glyoxalase domain containing 5 [Source:MGI Symbol;Acc:MGI:1917074]
33. Gm13611 ENSMUSG00000066068 16 0.931 - - - - - 0.931 predicted gene 13611 [Source:MGI Symbol;Acc:MGI:3651300]
34. Gm15751 ENSMUSG00000086753 3 0.931 - - - - - 0.931 predicted gene 15751 [Source:MGI Symbol;Acc:MGI:3783193]
35. Gm24455 ENSMUSG00000065282 4 0.931 - - - - - 0.931 predicted gene, 24455 [Source:MGI Symbol;Acc:MGI:5454232]
36. Gm12591 ENSMUSG00000082831 8 0.931 - - - - - 0.931 predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
37. Tnf ENSMUSG00000024401 3 0.931 - - - - - 0.931 tumor necrosis factor [Source:MGI Symbol;Acc:MGI:104798]
38. Gm6430 ENSMUSG00000044757 1 0.931 - - - - - 0.931 predicted gene 6430 [Source:MGI Symbol;Acc:MGI:3648857]
39. Slc26a1 ENSMUSG00000046959 24 0.931 - - - - - 0.931 solute carrier family 26 (sulfate transporter), member 1 [Source:MGI Symbol;Acc:MGI:2385894]
40. B230322F03Rik ENSMUSG00000097509 5 0.931 - - - - - 0.931 RIKEN cDNA B230322F03 gene [Source:MGI Symbol;Acc:MGI:3704291]
41. Inmt ENSMUSG00000003477 7 0.931 - - - - - 0.931 indolethylamine N-methyltransferase [Source:MGI Symbol;Acc:MGI:102963]
42. Gm14256 Gm14256 1 0.931 - - - - - 0.931
43. Vmn2r92 ENSMUSG00000091350 1 0.931 - - - - - 0.931 vomeronasal 2, receptor 92 [Source:MGI Symbol;Acc:MGI:3761352]
44. Colq ENSMUSG00000057606 3 0.931 - - - - - 0.931 collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:MGI Symbol;Acc:MGI:1338761]
45. Il13ra2 ENSMUSG00000031289 1 0.931 - - - - - 0.931 interleukin 13 receptor, alpha 2 [Source:MGI Symbol;Acc:MGI:1277954]
46. Gm12274 ENSMUSG00000083212 1 0.931 - - - - - 0.931 predicted gene 12274 [Source:MGI Symbol;Acc:MGI:3651758]
47. Snora62 ENSMUSG00000064925 2 0.931 - - - - - 0.931 small nucleolar RNA, H/ACA box 62 [Source:MGI Symbol;Acc:MGI:2148179]
48. Gm2155 ENSMUSG00000097288 4 0.931 - - - - - 0.931 predicted gene 2155 [Source:MGI Symbol;Acc:MGI:3780324]
49. Htr1a ENSMUSG00000021721 2 0.931 - - - - - 0.931 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
50. Trhr ENSMUSG00000038760 1 0.931 - - - - - 0.931 thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
51. Gm26876 ENSMUSG00000097372 7 0.931 - - - - - 0.931 predicted gene, 26876 [Source:MGI Symbol;Acc:MGI:5477370]
52. Lsmem1 ENSMUSG00000071342 24 0.929 - - 0.929 - - - leucine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:2685735]
53. 4932418E24Rik 4932418E24Rik 0 0.929 - - 0.929 - - -
54. Aqp3 ENSMUSG00000028435 17 0.929 - - 0.929 - - - aquaporin 3 [Source:MGI Symbol;Acc:MGI:1333777]
55. Kcne1 ENSMUSG00000039639 6 0.929 - - 0.929 - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
56. Amer3 ENSMUSG00000045174 9 0.929 - - 0.929 - - - APC membrane recruitment 3 [Source:MGI Symbol;Acc:MGI:3026939]
57. 2310043M15Rik ENSMUSG00000097768 0 0.929 - - 0.929 - - - RIKEN cDNA 2310043M15 gene [Source:MGI Symbol;Acc:MGI:1919180]
58. 4931409K22Rik ENSMUSG00000038199 1 0.929 - - 0.929 - - - RIKEN cDNA 4931409K22 gene [Source:MGI Symbol;Acc:MGI:3045319]
59. Asb10 ENSMUSG00000038204 5 0.929 - - 0.929 - - - ankyrin repeat and SOCS box-containing 10 [Source:MGI Symbol;Acc:MGI:2152836]
60. Uts2r ENSMUSG00000039321 8 0.929 - - 0.929 - - - urotensin 2 receptor [Source:MGI Symbol;Acc:MGI:2183450]
61. Gm5499 ENSMUSG00000071035 0 0.929 - - 0.929 - - - predicted pseudogene 5499 [Source:MGI Symbol;Acc:MGI:3643804]
62. Gm13904 ENSMUSG00000082066 4 0.929 - - 0.929 - - - predicted gene 13904 [Source:MGI Symbol;Acc:MGI:3651201]
63. AI317395 AI317395 2 0.929 - - 0.929 - - -
64. Sp9 ENSMUSG00000068859 60 0.929 - - 0.929 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
65. Gm20621 ENSMUSG00000093394 10 0.929 - - 0.929 - - - predicted gene 20621 [Source:MGI Symbol;Acc:MGI:5313068]
66. 9630001P10Rik ENSMUSG00000097825 4 0.929 - - 0.929 - - - RIKEN cDNA 9630001P10 gene [Source:MGI Symbol;Acc:MGI:2441755]
67. 4930519F16Rik ENSMUSG00000031325 7 0.929 - - 0.929 - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]
68. Gm20649 ENSMUSG00000093662 1 0.929 - - 0.929 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
69. 1700113H08Rik ENSMUSG00000047129 8 0.929 - - 0.929 - - - RIKEN cDNA 1700113H08 gene [Source:MGI Symbol;Acc:MGI:1923890]
70. Npas1 ENSMUSG00000001988 1 0.929 - - 0.929 - - - neuronal PAS domain protein 1 [Source:MGI Symbol;Acc:MGI:109205]
71. Cd72 ENSMUSG00000028459 0 0.929 - - 0.929 - - - CD72 antigen [Source:MGI Symbol;Acc:MGI:88345]
72. Serpinc1 ENSMUSG00000026715 40 0.929 - - 0.929 - - - serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 [Source:MGI Symbol;Acc:MGI:88095]
73. Zkscan16 ENSMUSG00000038630 0 0.929 - - 0.929 - - - zinc finger with KRAB and SCAN domains 16 [Source:MGI Symbol;Acc:MGI:3510405]
74. 4833428L15Rik ENSMUSG00000097074 0 0.929 - - 0.929 - - - RIKEN cDNA 4833428L15 gene [Source:MGI Symbol;Acc:MGI:1921852]
75. Gm6356 ENSMUSG00000091400 0 0.929 - - 0.929 - - - predicted gene 6356 [Source:MGI Symbol;Acc:MGI:3646390]
76. 4930586N03Rik ENSMUSG00000087097 0 0.929 - - 0.929 - - - RIKEN cDNA 4930586N03 gene [Source:MGI Symbol;Acc:MGI:1923137]
77. Fam169b ENSMUSG00000074071 5 0.929 - - 0.929 - - - family with sequence similarity 169, member B [Source:MGI Symbol;Acc:MGI:3644026]
78. Gm10390 ENSMUSG00000097368 4 0.929 - - 0.929 - - - predicted gene 10390 [Source:MGI Symbol;Acc:MGI:3708725]
79. Gm9945 ENSMUSG00000054450 2 0.929 - - 0.929 - - - predicted gene 9945 [Source:MGI Symbol;Acc:MGI:3641652]
80. Gm14131 ENSMUSG00000081470 0 0.929 - - 0.929 - - - predicted gene 14131 [Source:MGI Symbol;Acc:MGI:3652215]
81. 1700047K16Rik ENSMUSG00000087347 2 0.929 - - 0.929 - - - RIKEN cDNA 1700047K16 gene [Source:MGI Symbol;Acc:MGI:1920585]
82. Gm27030 ENSMUSG00000098221 7 0.929 - - 0.929 - - - predicted gene, 27030 [Source:MGI Symbol;Acc:MGI:5504145]
83. Gm6781 ENSMUSG00000035129 10 0.929 - - 0.929 - - - predicted gene 6781 [Source:MGI Symbol;Acc:MGI:3644510]
84. Gm13828 ENSMUSG00000083182 2 0.929 - - 0.929 - - - predicted gene 13828 [Source:MGI Symbol;Acc:MGI:3651756]
85. Gm15063 ENSMUSG00000086937 6 0.929 - - 0.929 - - - predicted gene 15063 [Source:MGI Symbol;Acc:MGI:3705169]
86. Gm25360 ENSMUSG00000094655 11 0.929 - - 0.929 - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
87. Gm15865 Gm15865 1 0.929 - - 0.929 - - -
88. Mir214 ENSMUSG00000065516 0 0.929 - - 0.929 - - - microRNA 214 [Source:MGI Symbol;Acc:MGI:2676890]
89. Gnat3 ENSMUSG00000028777 6 0.929 - - 0.929 - - - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
90. Gm7638 ENSMUSG00000080790 1 0.929 - - 0.929 - - - predicted gene 7638 [Source:MGI Symbol;Acc:MGI:3643470]
91. Terc ENSMUSG00000064796 2 0.929 - - 0.929 - - - telomerase RNA component [Source:MGI Symbol;Acc:MGI:109558]
92. 4930417O22Rik ENSMUSG00000071818 0 0.929 - - 0.929 - - - RIKEN cDNA 4930417O22 gene [Source:MGI Symbol;Acc:MGI:1921137]
93. Gm17196 ENSMUSG00000090708 11 0.929 - - 0.929 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
94. Tmem232 ENSMUSG00000045036 0 0.929 - - 0.929 - - - transmembrane protein 232 [Source:MGI Symbol;Acc:MGI:2685786]
95. Rps12-ps12 ENSMUSG00000093990 0 0.929 - - 0.929 - - - ribosomal protein S12, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3646874]
96. Ghrh ENSMUSG00000027643 0 0.929 - - 0.929 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
97. Odf3b ENSMUSG00000047394 4 0.929 - - 0.929 - - - outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
98. Gm24044 ENSMUSG00000065041 3 0.929 - - 0.929 - - - predicted gene, 24044 [Source:MGI Symbol;Acc:MGI:5453821]
99. Gm15627 ENSMUSG00000087344 6 0.929 - - 0.929 - - - predicted gene 15627 [Source:MGI Symbol;Acc:MGI:3783071]
100. Etos1 ENSMUSG00000050189 4 0.929 - - 0.929 - - - ectopic ossification 1 [Source:MGI Symbol;Acc:MGI:2149837]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA