Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vsx2

Gene Name Gene ID Reads Annotation
Vsx2 ENSMUSG00000021239 34 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]







Genes with expression patterns similar to Vsx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx2 ENSMUSG00000021239 34 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
2. Chi3l7 Chi3l7 3 2.455 0.815 0.711 0.929 - - -
3. Foxn4 ENSMUSG00000042002 22 2.358 - - 0.929 0.706 0.723 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
4. A930009A15Rik ENSMUSG00000092210 2 1.86 - - 0.929 - - 0.931 RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
5. Wdr66 ENSMUSG00000029442 10 1.86 - - 0.929 - - 0.931 WD repeat domain 66 [Source:MGI Symbol;Acc:MGI:1918495]
6. Sox14 ENSMUSG00000053747 13 1.723 - - 0.929 0.794 - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
7. Slc6a5 ENSMUSG00000039728 13 1.722 - - 0.929 0.793 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
8. Hes2 ENSMUSG00000028940 7 1.715 - - 0.929 - 0.786 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
9. Vsx1 ENSMUSG00000033080 23 1.7 - - 0.929 - 0.771 - visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
10. Nkx1-2 ENSMUSG00000048528 9 1.666 - - 0.929 0.737 - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
11. Nek11 ENSMUSG00000035032 4 1.653 - - 0.929 0.724 - - NIMA (never in mitosis gene a)-related expressed kinase 11 [Source:MGI Symbol;Acc:MGI:2442276]
12. Gm12186 ENSMUSG00000084153 4 1.653 - - 0.929 0.724 - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
13. 1700003M02Rik 1700003M02Rik 8 1.642 - 0.711 - - - 0.931
14. 1110002J07Rik ENSMUSG00000097134 1 1.64 - 0.711 0.929 - - - RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
15. Gm15687 ENSMUSG00000086643 3 1.64 - 0.711 0.929 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
16. Rhov ENSMUSG00000034226 16 1.474 - 0.711 - - 0.763 - ras homolog family member V [Source:MGI Symbol;Acc:MGI:2444227]
17. Sncg ENSMUSG00000023064 1702 1.468 - - - - 0.720 0.748 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
18. BC064078 ENSMUSG00000087150 55 1.465 - - 0.749 - 0.716 - cDNA sequence BC064078 [Source:MGI Symbol;Acc:MGI:3040692]
19. Prdm8 ENSMUSG00000035456 310 1.456 - - 0.723 0.733 - - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
20. Wdr93 ENSMUSG00000039099 10 0.962 0.962 - - - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
21. RP24-129O14.1 RP24-129O14.1 4 0.962 0.962 - - - - -
22. 5730457N03Rik 5730457N03Rik 14 0.948 - - 0.948 - - -
23. Klrc2 ENSMUSG00000052736 6 0.935 - - - - - 0.935 killer cell lectin-like receptor subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:1336162]
24. Gm2155 ENSMUSG00000097288 4 0.931 - - - - - 0.931 predicted gene 2155 [Source:MGI Symbol;Acc:MGI:3780324]
25. Gm12274 ENSMUSG00000083212 1 0.931 - - - - - 0.931 predicted gene 12274 [Source:MGI Symbol;Acc:MGI:3651758]
26. Snora62 ENSMUSG00000064925 2 0.931 - - - - - 0.931 small nucleolar RNA, H/ACA box 62 [Source:MGI Symbol;Acc:MGI:2148179]
27. Gm26876 ENSMUSG00000097372 7 0.931 - - - - - 0.931 predicted gene, 26876 [Source:MGI Symbol;Acc:MGI:5477370]
28. Htr1a ENSMUSG00000021721 2 0.931 - - - - - 0.931 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
29. Trhr ENSMUSG00000038760 1 0.931 - - - - - 0.931 thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
30. Gm14256 Gm14256 1 0.931 - - - - - 0.931
31. Vmn2r92 ENSMUSG00000091350 1 0.931 - - - - - 0.931 vomeronasal 2, receptor 92 [Source:MGI Symbol;Acc:MGI:3761352]
32. Inmt ENSMUSG00000003477 7 0.931 - - - - - 0.931 indolethylamine N-methyltransferase [Source:MGI Symbol;Acc:MGI:102963]
33. Slc26a1 ENSMUSG00000046959 24 0.931 - - - - - 0.931 solute carrier family 26 (sulfate transporter), member 1 [Source:MGI Symbol;Acc:MGI:2385894]
34. B230322F03Rik ENSMUSG00000097509 5 0.931 - - - - - 0.931 RIKEN cDNA B230322F03 gene [Source:MGI Symbol;Acc:MGI:3704291]
35. Il13ra2 ENSMUSG00000031289 1 0.931 - - - - - 0.931 interleukin 13 receptor, alpha 2 [Source:MGI Symbol;Acc:MGI:1277954]
36. Colq ENSMUSG00000057606 3 0.931 - - - - - 0.931 collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:MGI Symbol;Acc:MGI:1338761]
37. Gm15751 ENSMUSG00000086753 3 0.931 - - - - - 0.931 predicted gene 15751 [Source:MGI Symbol;Acc:MGI:3783193]
38. Glod5 ENSMUSG00000031163 3 0.931 - - - - - 0.931 glyoxalase domain containing 5 [Source:MGI Symbol;Acc:MGI:1917074]
39. Gm13611 ENSMUSG00000066068 16 0.931 - - - - - 0.931 predicted gene 13611 [Source:MGI Symbol;Acc:MGI:3651300]
40. Gm6430 ENSMUSG00000044757 1 0.931 - - - - - 0.931 predicted gene 6430 [Source:MGI Symbol;Acc:MGI:3648857]
41. Tnf ENSMUSG00000024401 3 0.931 - - - - - 0.931 tumor necrosis factor [Source:MGI Symbol;Acc:MGI:104798]
42. Gm12591 ENSMUSG00000082831 8 0.931 - - - - - 0.931 predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
43. Gm24455 ENSMUSG00000065282 4 0.931 - - - - - 0.931 predicted gene, 24455 [Source:MGI Symbol;Acc:MGI:5454232]
44. Gm11476 ENSMUSG00000085596 1 0.931 - - - - - 0.931 predicted gene 11476 [Source:MGI Symbol;Acc:MGI:3705135]
45. Gm15825 ENSMUSG00000089787 24 0.931 - - - - - 0.931 predicted gene 15825 [Source:MGI Symbol;Acc:MGI:3801887]
46. Iglon5 ENSMUSG00000013367 30 0.931 - - - - - 0.931 IgLON family member 5 [Source:MGI Symbol;Acc:MGI:2686277]
47. Gm26604 ENSMUSG00000097079 11 0.931 - - - - - 0.931 predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
48. Gm13620 ENSMUSG00000086603 1 0.931 - - - - - 0.931 predicted gene 13620 [Source:MGI Symbol;Acc:MGI:3650077]
49. Trim61 ENSMUSG00000109718 16 0.931 - - - - - 0.931 tripartite motif-containing 61 [Source:MGI Symbol;Acc:MGI:2387432]
50. Aldh8a1 ENSMUSG00000037542 5 0.931 - - - - - 0.931 aldehyde dehydrogenase 8 family, member A1 [Source:MGI Symbol;Acc:MGI:2653900]
51. Gm15261 ENSMUSG00000087201 9 0.931 - - - - - 0.931 predicted gene 15261 [Source:MGI Symbol;Acc:MGI:3705201]
52. Gm16638 ENSMUSG00000087088 1 0.929 - - 0.929 - - - predicted gene, 16638 [Source:MGI Symbol;Acc:MGI:4439562]
53. Cst7 ENSMUSG00000068129 1 0.929 - - 0.929 - - - cystatin F (leukocystatin) [Source:MGI Symbol;Acc:MGI:1298217]
54. Gm15472 ENSMUSG00000084760 0 0.929 - - 0.929 - - - predicted gene 15472 [Source:MGI Symbol;Acc:MGI:3707328]
55. Ropn1 ENSMUSG00000022832 0 0.929 - - 0.929 - - - ropporin, rhophilin associated protein 1 [Source:MGI Symbol;Acc:MGI:1923628]
56. Glra2 ENSMUSG00000018589 17 0.929 - - 0.929 - - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
57. Gm15179 ENSMUSG00000085653 2 0.929 - - 0.929 - - - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
58. C530050E15Rik ENSMUSG00000097838 2 0.929 - - 0.929 - - - RIKEN cDNA C530050E15 gene [Source:MGI Symbol;Acc:MGI:2444135]
59. Gm8062 ENSMUSG00000066714 4 0.929 - - 0.929 - - - predicted pseudogene 8062 [Source:MGI Symbol;Acc:MGI:3643433]
60. Mlph ENSMUSG00000026303 8 0.929 - - 0.929 - - - melanophilin [Source:MGI Symbol;Acc:MGI:2176380]
61. Epgn ENSMUSG00000035020 17 0.929 - - 0.929 - - - epithelial mitogen [Source:MGI Symbol;Acc:MGI:1919170]
62. Abhd12b ENSMUSG00000090121 5 0.929 - - 0.929 - - - abhydrolase domain containing 12B [Source:MGI Symbol;Acc:MGI:2685650]
63. Rps12-ps1 ENSMUSG00000082746 6 0.929 - - 0.929 - - - ribosomal protein S12, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1353638]
64. Ace ENSMUSG00000020681 11 0.929 - - 0.929 - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:MGI Symbol;Acc:MGI:87874]
65. Plin1 ENSMUSG00000030546 0 0.929 - - 0.929 - - - perilipin 1 [Source:MGI Symbol;Acc:MGI:1890505]
66. Csf3 ENSMUSG00000038067 0 0.929 - - 0.929 - - - colony stimulating factor 3 (granulocyte) [Source:MGI Symbol;Acc:MGI:1339751]
67. Akr1b7 ENSMUSG00000052131 2 0.929 - - 0.929 - - - aldo-keto reductase family 1, member B7 [Source:MGI Symbol;Acc:MGI:101918]
68. Gm11837 ENSMUSG00000086587 10 0.929 - - 0.929 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
69. Cd9-ps ENSMUSG00000092193 1 0.929 - - 0.929 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
70. Gm15440 Gm15440 1 0.929 - - 0.929 - - -
71. Chat ENSMUSG00000021919 22 0.929 - - 0.929 - - - choline acetyltransferase [Source:MGI Symbol;Acc:MGI:88392]
72. Gm26994 ENSMUSG00000098075 2 0.929 - - 0.929 - - - predicted gene, 26994 [Source:MGI Symbol;Acc:MGI:5504109]
73. Gm13206 ENSMUSG00000087027 0 0.929 - - 0.929 - - - predicted gene 13206 [Source:MGI Symbol;Acc:MGI:3651440]
74. Trim69 ENSMUSG00000033368 3 0.929 - - 0.929 - - - tripartite motif-containing 69 [Source:MGI Symbol;Acc:MGI:1918178]
75. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 0.929 - - 0.929 - - - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
76. Vmn1r4 ENSMUSG00000071893 3 0.929 - - 0.929 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
77. Gm17151 ENSMUSG00000075558 1 0.929 - - 0.929 - - - predicted gene 17151 [Source:MGI Symbol;Acc:MGI:4937978]
78. Etos1 ENSMUSG00000050189 4 0.929 - - 0.929 - - - ectopic ossification 1 [Source:MGI Symbol;Acc:MGI:2149837]
79. Gm20703 ENSMUSG00000093622 1 0.929 - - 0.929 - - - predicted gene 20703 [Source:MGI Symbol;Acc:MGI:5313150]
80. Gm7180 ENSMUSG00000083774 1 0.929 - - 0.929 - - - predicted pseudogene 7180 [Source:MGI Symbol;Acc:MGI:3648560]
81. Odf3b ENSMUSG00000047394 4 0.929 - - 0.929 - - - outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
82. Gm24044 ENSMUSG00000065041 3 0.929 - - 0.929 - - - predicted gene, 24044 [Source:MGI Symbol;Acc:MGI:5453821]
83. Gm15627 ENSMUSG00000087344 6 0.929 - - 0.929 - - - predicted gene 15627 [Source:MGI Symbol;Acc:MGI:3783071]
84. Ghrh ENSMUSG00000027643 0 0.929 - - 0.929 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
85. 4930417O22Rik ENSMUSG00000071818 0 0.929 - - 0.929 - - - RIKEN cDNA 4930417O22 gene [Source:MGI Symbol;Acc:MGI:1921137]
86. Gm17196 ENSMUSG00000090708 11 0.929 - - 0.929 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
87. Tmem232 ENSMUSG00000045036 0 0.929 - - 0.929 - - - transmembrane protein 232 [Source:MGI Symbol;Acc:MGI:2685786]
88. Rps12-ps12 ENSMUSG00000093990 0 0.929 - - 0.929 - - - ribosomal protein S12, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3646874]
89. Terc ENSMUSG00000064796 2 0.929 - - 0.929 - - - telomerase RNA component [Source:MGI Symbol;Acc:MGI:109558]
90. Gnat3 ENSMUSG00000028777 6 0.929 - - 0.929 - - - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
91. Gm7638 ENSMUSG00000080790 1 0.929 - - 0.929 - - - predicted gene 7638 [Source:MGI Symbol;Acc:MGI:3643470]
92. Gm10417 ENSMUSG00000103580 12 0.929 - - 0.929 - - - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
93. Gm10524 ENSMUSG00000097141 2 0.929 - - 0.929 - - - predicted gene 10524 [Source:MGI Symbol;Acc:MGI:3642791]
94. Snord35b ENSMUSG00000064767 0 0.929 - - 0.929 - - - small nucleolar RNA, C/D box 35B [Source:MGI Symbol;Acc:MGI:1351321]
95. Gm26594 ENSMUSG00000097189 7 0.929 - - 0.929 - - - predicted gene, 26594 [Source:MGI Symbol;Acc:MGI:5477088]
96. Gm5466 ENSMUSG00000083397 4 0.929 - - 0.929 - - - predicted gene 5466 [Source:MGI Symbol;Acc:MGI:3647828]
97. Nxnl1 ENSMUSG00000034829 6 0.929 - - 0.929 - - - nucleoredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1924446]
98. Tcp1-ps1 ENSMUSG00000081231 0 0.929 - - 0.929 - - - t-complex protein 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98536]
99. Gm5468 ENSMUSG00000056089 9 0.929 - - 0.929 - - - predicted gene 5468 [Source:MGI Symbol;Acc:MGI:3648948]
100. Fam169b ENSMUSG00000074071 5 0.929 - - 0.929 - - - family with sequence similarity 169, member B [Source:MGI Symbol;Acc:MGI:3644026]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA