Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vsx1

Gene Name Gene ID Reads Annotation
Vsx1 ENSMUSG00000033080 23 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]







Genes with expression patterns similar to Vsx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx1 ENSMUSG00000033080 23 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
2. Foxn4 ENSMUSG00000042002 22 2.511 - - 1.000 0.733 0.778 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
3. Hes2 ENSMUSG00000028940 7 1.837 - - 1.000 - 0.837 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
4. Glra2 ENSMUSG00000018589 17 1.748 - - 1.000 0.748 - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
5. Gm12866 ENSMUSG00000066060 3 1.721 1.000 - - - 0.721 - predicted gene 12866 [Source:MGI Symbol;Acc:MGI:3649462]
6. Vsx2 ENSMUSG00000021239 34 1.7 - - 0.929 - 0.771 - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
7. Gm12098 ENSMUSG00000082078 4 1.608 0.883 - 0.725 - - - predicted gene 12098 [Source:MGI Symbol;Acc:MGI:3651581]
8. Sncg ENSMUSG00000023064 1702 1.556 - - - - 0.746 0.810 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
9. 3110035E14Rik 204 1.502 - - 0.771 - 0.731 - RIKEN cDNA 3110035E14 gene
10. Fam57b ENSMUSG00000058966 243 1.481 - - - - 0.769 0.712 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
11. Rab3c ENSMUSG00000021700 370 1.476 - - - 0.741 - 0.735 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
12. Elmod1 ENSMUSG00000041986 75 1.465 - - - - 0.734 0.731 ELMO/CED-12 domain containing 1 [Source:MGI Symbol;Acc:MGI:3583900]
13. Prdm8 ENSMUSG00000035456 310 1.442 - - 0.722 - 0.720 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
14. 1700113H08Rik ENSMUSG00000047129 8 1 - - 1.000 - - - RIKEN cDNA 1700113H08 gene [Source:MGI Symbol;Acc:MGI:1923890]
15. Gm16638 ENSMUSG00000087088 1 1 - - 1.000 - - - predicted gene, 16638 [Source:MGI Symbol;Acc:MGI:4439562]
16. Gm6781 ENSMUSG00000035129 10 1 - - 1.000 - - - predicted gene 6781 [Source:MGI Symbol;Acc:MGI:3644510]
17. Gm13135 ENSMUSG00000082925 3 1 1.000 - - - - - predicted gene 13135 [Source:MGI Symbol;Acc:MGI:3650404]
18. Gtf2a1l ENSMUSG00000024154 7 1 1.000 - - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
19. Gm26994 ENSMUSG00000098075 2 1 - - 1.000 - - - predicted gene, 26994 [Source:MGI Symbol;Acc:MGI:5504109]
20. Ace ENSMUSG00000020681 11 1 - - 1.000 - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:MGI Symbol;Acc:MGI:87874]
21. Mmp25 ENSMUSG00000023903 6 1 1.000 - - - - - matrix metallopeptidase 25 [Source:MGI Symbol;Acc:MGI:2443938]
22. 4931409K22Rik ENSMUSG00000038199 1 1 - - 1.000 - - - RIKEN cDNA 4931409K22 gene [Source:MGI Symbol;Acc:MGI:3045319]
23. Gm15687 ENSMUSG00000086643 3 1 - - 1.000 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
24. Vmn1r4 ENSMUSG00000071893 3 1 - - 1.000 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
25. 2610204G07Rik ENSMUSG00000084860 5 1 1.000 - - - - - RIKEN cDNA 2610204G07 gene [Source:MGI Symbol;Acc:MGI:1919718]
26. Gm26397 ENSMUSG00000065637 1 1 1.000 - - - - - predicted gene, 26397 [Source:MGI Symbol;Acc:MGI:5456174]
27. Slc6a5 ENSMUSG00000039728 13 1 - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
28. Gm1553 ENSMUSG00000094186 1 1 1.000 - - - - - predicted gene 1553 [Source:MGI Symbol;Acc:MGI:2686399]
29. Gm15063 ENSMUSG00000086937 6 1 - - 1.000 - - - predicted gene 15063 [Source:MGI Symbol;Acc:MGI:3705169]
30. Gm7638 ENSMUSG00000080790 1 1 - - 1.000 - - - predicted gene 7638 [Source:MGI Symbol;Acc:MGI:3643470]
31. Gm20782 Gm20782 1 1 1.000 - - - - -
32. Gm13904 ENSMUSG00000082066 4 1 - - 1.000 - - - predicted gene 13904 [Source:MGI Symbol;Acc:MGI:3651201]
33. A930009A15Rik ENSMUSG00000092210 2 1 - - 1.000 - - - RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
34. Plin1 ENSMUSG00000030546 0 1 - - 1.000 - - - perilipin 1 [Source:MGI Symbol;Acc:MGI:1890505]
35. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 1 - - 1.000 - - - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
36. 4930586N03Rik ENSMUSG00000087097 0 1 - - 1.000 - - - RIKEN cDNA 4930586N03 gene [Source:MGI Symbol;Acc:MGI:1923137]
37. Shank1 ENSMUSG00000038738 19 1 1.000 - - - - - SH3 and multiple ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:3613677]
38. Asb10 ENSMUSG00000038204 5 1 - - 1.000 - - - ankyrin repeat and SOCS box-containing 10 [Source:MGI Symbol;Acc:MGI:2152836]
39. Cecr6 20 1 1.000 - - - - - cat eye syndrome chromosome region, candidate 6
40. Gm25360 ENSMUSG00000094655 11 1 - - 1.000 - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
41. Gm2962 ENSMUSG00000089838 13 1 1.000 - - - - - predicted pseudogene 2962 [Source:MGI Symbol;Acc:MGI:3781140]
42. Gm17151 ENSMUSG00000075558 1 1 - - 1.000 - - - predicted gene 17151 [Source:MGI Symbol;Acc:MGI:4937978]
43. Gm11127 ENSMUSG00000079492 17 1 1.000 - - - - - predicted gene 11127 [Source:MGI Symbol;Acc:MGI:3779381]
44. 2310043M15Rik ENSMUSG00000097768 0 1 - - 1.000 - - - RIKEN cDNA 2310043M15 gene [Source:MGI Symbol;Acc:MGI:1919180]
45. Oas1e ENSMUSG00000066867 1 1 1.000 - - - - - 2'-5' oligoadenylate synthetase 1E [Source:MGI Symbol;Acc:MGI:2180856]
46. Gm14131 ENSMUSG00000081470 0 1 - - 1.000 - - - predicted gene 14131 [Source:MGI Symbol;Acc:MGI:3652215]
47. Gm20703 ENSMUSG00000093622 1 1 - - 1.000 - - - predicted gene 20703 [Source:MGI Symbol;Acc:MGI:5313150]
48. Gnat3 ENSMUSG00000028777 6 1 - - 1.000 - - - guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
49. Cd9-ps ENSMUSG00000092193 1 1 - - 1.000 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
50. Gm10524 ENSMUSG00000097141 2 1 - - 1.000 - - - predicted gene 10524 [Source:MGI Symbol;Acc:MGI:3642791]
51. Gm13015 ENSMUSG00000070834 1 1 1.000 - - - - - predicted gene 13015 [Source:MGI Symbol;Acc:MGI:3651767]
52. Cst7 ENSMUSG00000068129 1 1 - - 1.000 - - - cystatin F (leukocystatin) [Source:MGI Symbol;Acc:MGI:1298217]
53. Gm12186 ENSMUSG00000084153 4 1 - - 1.000 - - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
54. Gm5499 ENSMUSG00000071035 0 1 - - 1.000 - - - predicted pseudogene 5499 [Source:MGI Symbol;Acc:MGI:3643804]
55. A230005M16Rik ENSMUSG00000087612 12 1 1.000 - - - - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
56. 4930417O22Rik ENSMUSG00000071818 0 1 - - 1.000 - - - RIKEN cDNA 4930417O22 gene [Source:MGI Symbol;Acc:MGI:1921137]
57. Uts2r ENSMUSG00000039321 8 1 - - 1.000 - - - urotensin 2 receptor [Source:MGI Symbol;Acc:MGI:2183450]
58. Odf3b ENSMUSG00000047394 4 1 - - 1.000 - - - outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
59. Chat ENSMUSG00000021919 22 1 - - 1.000 - - - choline acetyltransferase [Source:MGI Symbol;Acc:MGI:88392]
60. 4930519F16Rik ENSMUSG00000031325 7 1 - - 1.000 - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]
61. Rps12-ps12 ENSMUSG00000093990 0 1 - - 1.000 - - - ribosomal protein S12, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3646874]
62. 2310042E22Rik 2310042E22Rik 17 1 1.000 - - - - -
63. Mug1 ENSMUSG00000059908 5 1 1.000 - - - - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
64. Sox14 ENSMUSG00000053747 13 1 - - 1.000 - - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
65. Gm11837 ENSMUSG00000086587 10 1 - - 1.000 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
66. Gm16129 ENSMUSG00000085290 1 1 1.000 - - - - - predicted gene 16129 [Source:MGI Symbol;Acc:MGI:3801947]
67. Gm5942 ENSMUSG00000083561 2 1 1.000 - - - - - predicted gene 5942 [Source:MGI Symbol;Acc:MGI:3646003]
68. Gm20621 ENSMUSG00000093394 10 1 - - 1.000 - - - predicted gene 20621 [Source:MGI Symbol;Acc:MGI:5313068]
69. Kcne1 ENSMUSG00000039639 6 1 - - 1.000 - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
70. Gm10417 ENSMUSG00000103580 12 1 - - 1.000 - - - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
71. AI317395 AI317395 2 1 - - 1.000 - - -
72. Slc25a48 ENSMUSG00000021509 9 1 1.000 - - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
73. Sp9 ENSMUSG00000068859 60 1 - - 1.000 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
74. Mlph ENSMUSG00000026303 8 1 - - 1.000 - - - melanophilin [Source:MGI Symbol;Acc:MGI:2176380]
75. Gm19203 ENSMUSG00000092376 1 1 1.000 - - - - - predicted gene, 19203 [Source:MGI Symbol;Acc:MGI:5011388]
76. Gm27030 ENSMUSG00000098221 7 1 - - 1.000 - - - predicted gene, 27030 [Source:MGI Symbol;Acc:MGI:5504145]
77. 1700047K16Rik ENSMUSG00000087347 2 1 - - 1.000 - - - RIKEN cDNA 1700047K16 gene [Source:MGI Symbol;Acc:MGI:1920585]
78. Npas1 ENSMUSG00000001988 1 1 - - 1.000 - - - neuronal PAS domain protein 1 [Source:MGI Symbol;Acc:MGI:109205]
79. Aqp3 ENSMUSG00000028435 17 1 - - 1.000 - - - aquaporin 3 [Source:MGI Symbol;Acc:MGI:1333777]
80. Zkscan16 ENSMUSG00000038630 0 1 - - 1.000 - - - zinc finger with KRAB and SCAN domains 16 [Source:MGI Symbol;Acc:MGI:3510405]
81. Abcc8 ENSMUSG00000040136 63 1 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:MGI Symbol;Acc:MGI:1352629]
82. Gm11410 ENSMUSG00000083219 1 1 1.000 - - - - - predicted gene 11410 [Source:MGI Symbol;Acc:MGI:3652015]
83. Gm17196 ENSMUSG00000090708 11 1 - - 1.000 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
84. Ifi204 ENSMUSG00000073489 8 1 1.000 - - - - - interferon activated gene 204 [Source:MGI Symbol;Acc:MGI:96429]
85. Lsmem1 ENSMUSG00000071342 24 1 - - 1.000 - - - leucine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:2685735]
86. Mir214 ENSMUSG00000065516 0 1 - - 1.000 - - - microRNA 214 [Source:MGI Symbol;Acc:MGI:2676890]
87. Ghrh ENSMUSG00000027643 0 1 - - 1.000 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
88. Nxnl1 ENSMUSG00000034829 6 1 - - 1.000 - - - nucleoredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1924446]
89. Gm20649 ENSMUSG00000093662 1 1 - - 1.000 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
90. Gm24044 ENSMUSG00000065041 3 1 - - 1.000 - - - predicted gene, 24044 [Source:MGI Symbol;Acc:MGI:5453821]
91. 4833428L15Rik ENSMUSG00000097074 0 1 - - 1.000 - - - RIKEN cDNA 4833428L15 gene [Source:MGI Symbol;Acc:MGI:1921852]
92. 6430562O15Rik ENSMUSG00000097828 27 1 1.000 - - - - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
93. Eomes ENSMUSG00000032446 9 1 1.000 - - - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
94. 4933422H20Rik 4933422H20Rik 7 1 1.000 - - - - -
95. Tcp1-ps1 ENSMUSG00000081231 0 1 - - 1.000 - - - t-complex protein 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98536]
96. Gm5451 ENSMUSG00000095847 4 1 1.000 - - - - - predicted gene 5451 [Source:MGI Symbol;Acc:MGI:3643790]
97. Agrp ENSMUSG00000005705 6 1 1.000 - - - - - agouti related neuropeptide [Source:MGI Symbol;Acc:MGI:892013]
98. 9630001P10Rik ENSMUSG00000097825 4 1 - - 1.000 - - - RIKEN cDNA 9630001P10 gene [Source:MGI Symbol;Acc:MGI:2441755]
99. Gm10390 ENSMUSG00000097368 4 1 - - 1.000 - - - predicted gene 10390 [Source:MGI Symbol;Acc:MGI:3708725]
100. Aldh3b2 ENSMUSG00000075296 33 1 1.000 - - - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA