Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vsx1

Gene Name Gene ID Reads Annotation
Vsx1 ENSMUSG00000033080 23 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]







Genes with expression patterns similar to Vsx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx1 ENSMUSG00000033080 23 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
2. Foxn4 ENSMUSG00000042002 22 2.511 - - 1.000 0.733 0.778 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
3. Hes2 ENSMUSG00000028940 7 1.837 - - 1.000 - 0.837 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
4. Glra2 ENSMUSG00000018589 17 1.748 - - 1.000 0.748 - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
5. Gm12866 ENSMUSG00000066060 3 1.721 1.000 - - - 0.721 - predicted gene 12866 [Source:MGI Symbol;Acc:MGI:3649462]
6. Vsx2 ENSMUSG00000021239 34 1.7 - - 0.929 - 0.771 - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
7. Gm12098 ENSMUSG00000082078 4 1.608 0.883 - 0.725 - - - predicted gene 12098 [Source:MGI Symbol;Acc:MGI:3651581]
8. Sncg ENSMUSG00000023064 1702 1.556 - - - - 0.746 0.810 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
9. 3110035E14Rik 204 1.502 - - 0.771 - 0.731 - RIKEN cDNA 3110035E14 gene
10. Fam57b ENSMUSG00000058966 243 1.481 - - - - 0.769 0.712 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
11. Rab3c ENSMUSG00000021700 370 1.476 - - - 0.741 - 0.735 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
12. Elmod1 ENSMUSG00000041986 75 1.465 - - - - 0.734 0.731 ELMO/CED-12 domain containing 1 [Source:MGI Symbol;Acc:MGI:3583900]
13. Prdm8 ENSMUSG00000035456 310 1.442 - - 0.722 - 0.720 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
14. Aqp3 ENSMUSG00000028435 17 1 - - 1.000 - - - aquaporin 3 [Source:MGI Symbol;Acc:MGI:1333777]
15. Gm15627 ENSMUSG00000087344 6 1 - - 1.000 - - - predicted gene 15627 [Source:MGI Symbol;Acc:MGI:3783071]
16. 2410088K16Rik 2410088K16Rik 5 1 1.000 - - - - -
17. Nek11 ENSMUSG00000035032 4 1 - - 1.000 - - - NIMA (never in mitosis gene a)-related expressed kinase 11 [Source:MGI Symbol;Acc:MGI:2442276]
18. Gm17151 ENSMUSG00000075558 1 1 - - 1.000 - - - predicted gene 17151 [Source:MGI Symbol;Acc:MGI:4937978]
19. Gm15687 ENSMUSG00000086643 3 1 - - 1.000 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
20. Cd9-ps ENSMUSG00000092193 1 1 - - 1.000 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
21. Gm11410 ENSMUSG00000083219 1 1 1.000 - - - - - predicted gene 11410 [Source:MGI Symbol;Acc:MGI:3652015]
22. Gtf2a1l ENSMUSG00000024154 7 1 1.000 - - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
23. Slc6a5 ENSMUSG00000039728 13 1 - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
24. 1700047K16Rik ENSMUSG00000087347 2 1 - - 1.000 - - - RIKEN cDNA 1700047K16 gene [Source:MGI Symbol;Acc:MGI:1920585]
25. Sox14 ENSMUSG00000053747 13 1 - - 1.000 - - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
26. Epgn ENSMUSG00000035020 17 1 - - 1.000 - - - epithelial mitogen [Source:MGI Symbol;Acc:MGI:1919170]
27. A230005M16Rik ENSMUSG00000087612 12 1 1.000 - - - - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
28. Mir214 ENSMUSG00000065516 0 1 - - 1.000 - - - microRNA 214 [Source:MGI Symbol;Acc:MGI:2676890]
29. Nkx1-2 ENSMUSG00000048528 9 1 - - 1.000 - - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
30. 1110002J07Rik ENSMUSG00000097134 1 1 - - 1.000 - - - RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
31. Gm15179 ENSMUSG00000085653 2 1 - - 1.000 - - - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
32. Shank1 ENSMUSG00000038738 19 1 1.000 - - - - - SH3 and multiple ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:3613677]
33. Gm7180 ENSMUSG00000083774 1 1 - - 1.000 - - - predicted pseudogene 7180 [Source:MGI Symbol;Acc:MGI:3648560]
34. Gm10417 ENSMUSG00000103580 12 1 - - 1.000 - - - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
35. 6430562O15Rik ENSMUSG00000097828 27 1 1.000 - - - - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
36. Agrp ENSMUSG00000005705 6 1 1.000 - - - - - agouti related neuropeptide [Source:MGI Symbol;Acc:MGI:892013]
37. Gm17196 ENSMUSG00000090708 11 1 - - 1.000 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
38. Gm10524 ENSMUSG00000097141 2 1 - - 1.000 - - - predicted gene 10524 [Source:MGI Symbol;Acc:MGI:3642791]
39. Gm27030 ENSMUSG00000098221 7 1 - - 1.000 - - - predicted gene, 27030 [Source:MGI Symbol;Acc:MGI:5504145]
40. Gm8062 ENSMUSG00000066714 4 1 - - 1.000 - - - predicted pseudogene 8062 [Source:MGI Symbol;Acc:MGI:3643433]
41. 4930586N03Rik ENSMUSG00000087097 0 1 - - 1.000 - - - RIKEN cDNA 4930586N03 gene [Source:MGI Symbol;Acc:MGI:1923137]
42. Ace ENSMUSG00000020681 11 1 - - 1.000 - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:MGI Symbol;Acc:MGI:87874]
43. Snord35b ENSMUSG00000064767 0 1 - - 1.000 - - - small nucleolar RNA, C/D box 35B [Source:MGI Symbol;Acc:MGI:1351321]
44. 4932418E24Rik 4932418E24Rik 0 1 - - 1.000 - - -
45. Zkscan16 ENSMUSG00000038630 0 1 - - 1.000 - - - zinc finger with KRAB and SCAN domains 16 [Source:MGI Symbol;Acc:MGI:3510405]
46. C530050E15Rik ENSMUSG00000097838 2 1 - - 1.000 - - - RIKEN cDNA C530050E15 gene [Source:MGI Symbol;Acc:MGI:2444135]
47. Gm26479 ENSMUSG00000084569 1 1 1.000 - - - - - predicted gene, 26479 [Source:MGI Symbol;Acc:MGI:5456256]
48. Gm13015 ENSMUSG00000070834 1 1 1.000 - - - - - predicted gene 13015 [Source:MGI Symbol;Acc:MGI:3651767]
49. Gm5451 ENSMUSG00000095847 4 1 1.000 - - - - - predicted gene 5451 [Source:MGI Symbol;Acc:MGI:3643790]
50. Vmn1r4 ENSMUSG00000071893 3 1 - - 1.000 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
51. Gm10390 ENSMUSG00000097368 4 1 - - 1.000 - - - predicted gene 10390 [Source:MGI Symbol;Acc:MGI:3708725]
52. Ifi204 ENSMUSG00000073489 8 1 1.000 - - - - - interferon activated gene 204 [Source:MGI Symbol;Acc:MGI:96429]
53. Trim69 ENSMUSG00000033368 3 1 - - 1.000 - - - tripartite motif-containing 69 [Source:MGI Symbol;Acc:MGI:1918178]
54. Slc25a48 ENSMUSG00000021509 9 1 1.000 - - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
55. 4833428L15Rik ENSMUSG00000097074 0 1 - - 1.000 - - - RIKEN cDNA 4833428L15 gene [Source:MGI Symbol;Acc:MGI:1921852]
56. Abhd12b ENSMUSG00000090121 5 1 - - 1.000 - - - abhydrolase domain containing 12B [Source:MGI Symbol;Acc:MGI:2685650]
57. Plin1 ENSMUSG00000030546 0 1 - - 1.000 - - - perilipin 1 [Source:MGI Symbol;Acc:MGI:1890505]
58. Krt1 ENSMUSG00000046834 15 1 1.000 - - - - - keratin 1 [Source:MGI Symbol;Acc:MGI:96698]
59. Gm25360 ENSMUSG00000094655 11 1 - - 1.000 - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
60. A830009L08Rik ENSMUSG00000097182 12 1 1.000 - - - - - RIKEN cDNA A830009L08 gene [Source:MGI Symbol;Acc:MGI:2443762]
61. F7 ENSMUSG00000031443 10 1 1.000 - - - - - coagulation factor VII [Source:MGI Symbol;Acc:MGI:109325]
62. Cecr6 20 1 1.000 - - - - - cat eye syndrome chromosome region, candidate 6
63. Gm20636 ENSMUSG00000093637 1 1 1.000 - - - - - predicted gene 20636 [Source:MGI Symbol;Acc:MGI:5313083]
64. Ghrh ENSMUSG00000027643 0 1 - - 1.000 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
65. Wdr66 ENSMUSG00000029442 10 1 - - 1.000 - - - WD repeat domain 66 [Source:MGI Symbol;Acc:MGI:1918495]
66. 2310042E22Rik 2310042E22Rik 17 1 1.000 - - - - -
67. Rrad ENSMUSG00000031880 27 1 1.000 - - - - - Ras-related associated with diabetes [Source:MGI Symbol;Acc:MGI:1930943]
68. Etos1 ENSMUSG00000050189 4 1 - - 1.000 - - - ectopic ossification 1 [Source:MGI Symbol;Acc:MGI:2149837]
69. Uts2r ENSMUSG00000039321 8 1 - - 1.000 - - - urotensin 2 receptor [Source:MGI Symbol;Acc:MGI:2183450]
70. Gm13135 ENSMUSG00000082925 3 1 1.000 - - - - - predicted gene 13135 [Source:MGI Symbol;Acc:MGI:3650404]
71. Gm15440 Gm15440 1 1 - - 1.000 - - -
72. Sp9 ENSMUSG00000068859 60 1 - - 1.000 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
73. Gm20649 ENSMUSG00000093662 1 1 - - 1.000 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
74. Gm16129 ENSMUSG00000085290 1 1 1.000 - - - - - predicted gene 16129 [Source:MGI Symbol;Acc:MGI:3801947]
75. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 1 - - 1.000 - - - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
76. 4930519F16Rik ENSMUSG00000031325 7 1 - - 1.000 - - - RIKEN cDNA 4930519F16 gene [Source:MGI Symbol;Acc:MGI:1922356]
77. Gm12186 ENSMUSG00000084153 4 1 - - 1.000 - - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
78. Smim18 ENSMUSG00000094500 31 1 1.000 - - - - - small integral membrane protein 18 [Source:MGI Symbol;Acc:MGI:1919882]
79. A930009A15Rik ENSMUSG00000092210 2 1 - - 1.000 - - - RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
80. Gm25099 ENSMUSG00000095676 10 1 1.000 - - - - - predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
81. Gm5466 ENSMUSG00000083397 4 1 - - 1.000 - - - predicted gene 5466 [Source:MGI Symbol;Acc:MGI:3647828]
82. Chat ENSMUSG00000021919 22 1 - - 1.000 - - - choline acetyltransferase [Source:MGI Symbol;Acc:MGI:88392]
83. Ropn1 ENSMUSG00000022832 0 1 - - 1.000 - - - ropporin, rhophilin associated protein 1 [Source:MGI Symbol;Acc:MGI:1923628]
84. Gm10439 ENSMUSG00000072923 1 1 1.000 - - - - - predicted gene 10439 [Source:MGI Symbol;Acc:MGI:3710525]
85. Tnfsf10 ENSMUSG00000039304 1 1 1.000 - - - - - tumor necrosis factor (ligand) superfamily, member 10 [Source:MGI Symbol;Acc:MGI:107414]
86. Gm2962 ENSMUSG00000089838 13 1 1.000 - - - - - predicted pseudogene 2962 [Source:MGI Symbol;Acc:MGI:3781140]
87. Mug1 ENSMUSG00000059908 5 1 1.000 - - - - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
88. Amer3 ENSMUSG00000045174 9 1 - - 1.000 - - - APC membrane recruitment 3 [Source:MGI Symbol;Acc:MGI:3026939]
89. Gm6781 ENSMUSG00000035129 10 1 - - 1.000 - - - predicted gene 6781 [Source:MGI Symbol;Acc:MGI:3644510]
90. Chrna10 ENSMUSG00000066279 1 1 1.000 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 10 [Source:MGI Symbol;Acc:MGI:3609260]
91. Oas1e ENSMUSG00000066867 1 1 1.000 - - - - - 2'-5' oligoadenylate synthetase 1E [Source:MGI Symbol;Acc:MGI:2180856]
92. Gm26397 ENSMUSG00000065637 1 1 1.000 - - - - - predicted gene, 26397 [Source:MGI Symbol;Acc:MGI:5456174]
93. Gm11127 ENSMUSG00000079492 17 1 1.000 - - - - - predicted gene 11127 [Source:MGI Symbol;Acc:MGI:3779381]
94. Tcp1-ps1 ENSMUSG00000081231 0 1 - - 1.000 - - - t-complex protein 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98536]
95. Gm15809 ENSMUSG00000090135 2 1 1.000 - - - - - predicted gene 15809 [Source:MGI Symbol;Acc:MGI:3802046]
96. 4933422H20Rik 4933422H20Rik 7 1 1.000 - - - - -
97. Gm17750 ENSMUSG00000098087 25 1 1.000 - - - - - predicted gene, 17750 [Source:MGI Symbol;Acc:MGI:5009828]
98. Gm11837 ENSMUSG00000086587 10 1 - - 1.000 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
99. Cd72 ENSMUSG00000028459 0 1 - - 1.000 - - - CD72 antigen [Source:MGI Symbol;Acc:MGI:88345]
100. 1700113H08Rik ENSMUSG00000047129 8 1 - - 1.000 - - - RIKEN cDNA 1700113H08 gene [Source:MGI Symbol;Acc:MGI:1923890]

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA