Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vsx1

Gene Name Gene ID Reads Annotation
Vsx1 ENSMUSG00000033080 23 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]







Genes with expression patterns similar to Vsx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vsx1 ENSMUSG00000033080 23 6 1.000 1.000 1.000 1.000 1.000 1.000 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
2. Foxn4 ENSMUSG00000042002 22 2.511 - - 1.000 0.733 0.778 - forkhead box N4 [Source:MGI Symbol;Acc:MGI:2151057]
3. Hes2 ENSMUSG00000028940 7 1.837 - - 1.000 - 0.837 - hes family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:1098624]
4. Glra2 ENSMUSG00000018589 17 1.748 - - 1.000 0.748 - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
5. Gm12866 ENSMUSG00000066060 3 1.721 1.000 - - - 0.721 - predicted gene 12866 [Source:MGI Symbol;Acc:MGI:3649462]
6. Vsx2 ENSMUSG00000021239 34 1.7 - - 0.929 - 0.771 - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
7. Gm12098 ENSMUSG00000082078 4 1.608 0.883 - 0.725 - - - predicted gene 12098 [Source:MGI Symbol;Acc:MGI:3651581]
8. Sncg ENSMUSG00000023064 1702 1.556 - - - - 0.746 0.810 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
9. 3110035E14Rik 204 1.502 - - 0.771 - 0.731 - RIKEN cDNA 3110035E14 gene
10. Fam57b ENSMUSG00000058966 243 1.481 - - - - 0.769 0.712 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
11. Rab3c ENSMUSG00000021700 370 1.476 - - - 0.741 - 0.735 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
12. Elmod1 ENSMUSG00000041986 75 1.465 - - - - 0.734 0.731 ELMO/CED-12 domain containing 1 [Source:MGI Symbol;Acc:MGI:3583900]
13. Prdm8 ENSMUSG00000035456 310 1.442 - - 0.722 - 0.720 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
14. Gm2962 ENSMUSG00000089838 13 1 1.000 - - - - - predicted pseudogene 2962 [Source:MGI Symbol;Acc:MGI:3781140]
15. Gm15179 ENSMUSG00000085653 2 1 - - 1.000 - - - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
16. Vmn1r4 ENSMUSG00000071893 3 1 - - 1.000 - - - vomeronasal 1 receptor 4 [Source:MGI Symbol;Acc:MGI:2159457]
17. B3galt4 ENSMUSG00000067370 28 1 1.000 - - - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1859517]
18. Gm20649 ENSMUSG00000093662 1 1 - - 1.000 - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
19. Gm13135 ENSMUSG00000082925 3 1 1.000 - - - - - predicted gene 13135 [Source:MGI Symbol;Acc:MGI:3650404]
20. Gm5451 ENSMUSG00000095847 4 1 1.000 - - - - - predicted gene 5451 [Source:MGI Symbol;Acc:MGI:3643790]
21. Gm15627 ENSMUSG00000087344 6 1 - - 1.000 - - - predicted gene 15627 [Source:MGI Symbol;Acc:MGI:3783071]
22. Nek11 ENSMUSG00000035032 4 1 - - 1.000 - - - NIMA (never in mitosis gene a)-related expressed kinase 11 [Source:MGI Symbol;Acc:MGI:2442276]
23. Eomes ENSMUSG00000032446 9 1 1.000 - - - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
24. Tnfsf10 ENSMUSG00000039304 1 1 1.000 - - - - - tumor necrosis factor (ligand) superfamily, member 10 [Source:MGI Symbol;Acc:MGI:107414]
25. Kcne1 ENSMUSG00000039639 6 1 - - 1.000 - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
26. Gm14131 ENSMUSG00000081470 0 1 - - 1.000 - - - predicted gene 14131 [Source:MGI Symbol;Acc:MGI:3652215]
27. Ghrh ENSMUSG00000027643 0 1 - - 1.000 - - - growth hormone releasing hormone [Source:MGI Symbol;Acc:MGI:95709]
28. Ropn1 ENSMUSG00000022832 0 1 - - 1.000 - - - ropporin, rhophilin associated protein 1 [Source:MGI Symbol;Acc:MGI:1923628]
29. Gm26994 ENSMUSG00000098075 2 1 - - 1.000 - - - predicted gene, 26994 [Source:MGI Symbol;Acc:MGI:5504109]
30. Asb10 ENSMUSG00000038204 5 1 - - 1.000 - - - ankyrin repeat and SOCS box-containing 10 [Source:MGI Symbol;Acc:MGI:2152836]
31. Npas1 ENSMUSG00000001988 1 1 - - 1.000 - - - neuronal PAS domain protein 1 [Source:MGI Symbol;Acc:MGI:109205]
32. Gm10390 ENSMUSG00000097368 4 1 - - 1.000 - - - predicted gene 10390 [Source:MGI Symbol;Acc:MGI:3708725]
33. Gm26594 ENSMUSG00000097189 7 1 - - 1.000 - - - predicted gene, 26594 [Source:MGI Symbol;Acc:MGI:5477088]
34. Lsmem1 ENSMUSG00000071342 24 1 - - 1.000 - - - leucine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:2685735]
35. Terc ENSMUSG00000064796 2 1 - - 1.000 - - - telomerase RNA component [Source:MGI Symbol;Acc:MGI:109558]
36. Shank1 ENSMUSG00000038738 19 1 1.000 - - - - - SH3 and multiple ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:3613677]
37. Nxnl1 ENSMUSG00000034829 6 1 - - 1.000 - - - nucleoredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1924446]
38. Cd72 ENSMUSG00000028459 0 1 - - 1.000 - - - CD72 antigen [Source:MGI Symbol;Acc:MGI:88345]
39. Chrna10 ENSMUSG00000066279 1 1 1.000 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 10 [Source:MGI Symbol;Acc:MGI:3609260]
40. Tmem232 ENSMUSG00000045036 0 1 - - 1.000 - - - transmembrane protein 232 [Source:MGI Symbol;Acc:MGI:2685786]
41. Gtf2a1l ENSMUSG00000024154 7 1 1.000 - - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
42. Slc6a5 ENSMUSG00000039728 13 1 - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
43. A230005M16Rik ENSMUSG00000087612 12 1 1.000 - - - - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
44. Gm5499 ENSMUSG00000071035 0 1 - - 1.000 - - - predicted pseudogene 5499 [Source:MGI Symbol;Acc:MGI:3643804]
45. 4833428L15Rik ENSMUSG00000097074 0 1 - - 1.000 - - - RIKEN cDNA 4833428L15 gene [Source:MGI Symbol;Acc:MGI:1921852]
46. Slc25a48 ENSMUSG00000021509 9 1 1.000 - - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
47. Rps12-ps1 ENSMUSG00000082746 6 1 - - 1.000 - - - ribosomal protein S12, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1353638]
48. Gm20703 ENSMUSG00000093622 1 1 - - 1.000 - - - predicted gene 20703 [Source:MGI Symbol;Acc:MGI:5313150]
49. Mmp25 ENSMUSG00000023903 6 1 1.000 - - - - - matrix metallopeptidase 25 [Source:MGI Symbol;Acc:MGI:2443938]
50. Gm25099 ENSMUSG00000095676 10 1 1.000 - - - - - predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
51. Gm24044 ENSMUSG00000065041 3 1 - - 1.000 - - - predicted gene, 24044 [Source:MGI Symbol;Acc:MGI:5453821]
52. Gm15472 ENSMUSG00000084760 0 1 - - 1.000 - - - predicted gene 15472 [Source:MGI Symbol;Acc:MGI:3707328]
53. Gm17196 ENSMUSG00000090708 11 1 - - 1.000 - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
54. Gm26479 ENSMUSG00000084569 1 1 1.000 - - - - - predicted gene, 26479 [Source:MGI Symbol;Acc:MGI:5456256]
55. 1110002J07Rik ENSMUSG00000097134 1 1 - - 1.000 - - - RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
56. Cd9-ps ENSMUSG00000092193 1 1 - - 1.000 - - - Cd9 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:3645134]
57. 2410088K16Rik 2410088K16Rik 5 1 1.000 - - - - -
58. 2310043M15Rik ENSMUSG00000097768 0 1 - - 1.000 - - - RIKEN cDNA 2310043M15 gene [Source:MGI Symbol;Acc:MGI:1919180]
59. Agrp ENSMUSG00000005705 6 1 1.000 - - - - - agouti related neuropeptide [Source:MGI Symbol;Acc:MGI:892013]
60. Smim18 ENSMUSG00000094500 31 1 1.000 - - - - - small integral membrane protein 18 [Source:MGI Symbol;Acc:MGI:1919882]
61. Uts2r ENSMUSG00000039321 8 1 - - 1.000 - - - urotensin 2 receptor [Source:MGI Symbol;Acc:MGI:2183450]
62. Gm7180 ENSMUSG00000083774 1 1 - - 1.000 - - - predicted pseudogene 7180 [Source:MGI Symbol;Acc:MGI:3648560]
63. A830009L08Rik ENSMUSG00000097182 12 1 1.000 - - - - - RIKEN cDNA A830009L08 gene [Source:MGI Symbol;Acc:MGI:2443762]
64. Gm11410 ENSMUSG00000083219 1 1 1.000 - - - - - predicted gene 11410 [Source:MGI Symbol;Acc:MGI:3652015]
65. Abcc8 ENSMUSG00000040136 63 1 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:MGI Symbol;Acc:MGI:1352629]
66. Gm11837 ENSMUSG00000086587 10 1 - - 1.000 - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
67. Mug1 ENSMUSG00000059908 5 1 1.000 - - - - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
68. Gm15687 ENSMUSG00000086643 3 1 - - 1.000 - - - predicted gene 15687 [Source:MGI Symbol;Acc:MGI:3783129]
69. Odf3b ENSMUSG00000047394 4 1 - - 1.000 - - - outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
70. Gm9945 ENSMUSG00000054450 2 1 - - 1.000 - - - predicted gene 9945 [Source:MGI Symbol;Acc:MGI:3641652]
71. Etos1 ENSMUSG00000050189 4 1 - - 1.000 - - - ectopic ossification 1 [Source:MGI Symbol;Acc:MGI:2149837]
72. Gm1553 ENSMUSG00000094186 1 1 1.000 - - - - - predicted gene 1553 [Source:MGI Symbol;Acc:MGI:2686399]
73. Gm5942 ENSMUSG00000083561 2 1 1.000 - - - - - predicted gene 5942 [Source:MGI Symbol;Acc:MGI:3646003]
74. F7 ENSMUSG00000031443 10 1 1.000 - - - - - coagulation factor VII [Source:MGI Symbol;Acc:MGI:109325]
75. Gm23547 ENSMUSG00000088835 11 1 1.000 - - - - - predicted gene, 23547 [Source:MGI Symbol;Acc:MGI:5453324]
76. Mir214 ENSMUSG00000065516 0 1 - - 1.000 - - - microRNA 214 [Source:MGI Symbol;Acc:MGI:2676890]
77. 4930417O22Rik ENSMUSG00000071818 0 1 - - 1.000 - - - RIKEN cDNA 4930417O22 gene [Source:MGI Symbol;Acc:MGI:1921137]
78. Zkscan16 ENSMUSG00000038630 0 1 - - 1.000 - - - zinc finger with KRAB and SCAN domains 16 [Source:MGI Symbol;Acc:MGI:3510405]
79. 4932418E24Rik 4932418E24Rik 0 1 - - 1.000 - - -
80. C530050E15Rik ENSMUSG00000097838 2 1 - - 1.000 - - - RIKEN cDNA C530050E15 gene [Source:MGI Symbol;Acc:MGI:2444135]
81. Gm15440 Gm15440 1 1 - - 1.000 - - -
82. Aqp3 ENSMUSG00000028435 17 1 - - 1.000 - - - aquaporin 3 [Source:MGI Symbol;Acc:MGI:1333777]
83. Gm17151 ENSMUSG00000075558 1 1 - - 1.000 - - - predicted gene 17151 [Source:MGI Symbol;Acc:MGI:4937978]
84. 1700113H08Rik ENSMUSG00000047129 8 1 - - 1.000 - - - RIKEN cDNA 1700113H08 gene [Source:MGI Symbol;Acc:MGI:1923890]
85. Ms4a15 ENSMUSG00000067571 5 1 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 15 [Source:MGI Symbol;Acc:MGI:3617853]
86. Abhd12b ENSMUSG00000090121 5 1 - - 1.000 - - - abhydrolase domain containing 12B [Source:MGI Symbol;Acc:MGI:2685650]
87. Epgn ENSMUSG00000035020 17 1 - - 1.000 - - - epithelial mitogen [Source:MGI Symbol;Acc:MGI:1919170]
88. 9630001P10Rik ENSMUSG00000097825 4 1 - - 1.000 - - - RIKEN cDNA 9630001P10 gene [Source:MGI Symbol;Acc:MGI:2441755]
89. Gm6781 ENSMUSG00000035129 10 1 - - 1.000 - - - predicted gene 6781 [Source:MGI Symbol;Acc:MGI:3644510]
90. Rps12-ps12 ENSMUSG00000093990 0 1 - - 1.000 - - - ribosomal protein S12, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3646874]
91. Oas1e ENSMUSG00000066867 1 1 1.000 - - - - - 2'-5' oligoadenylate synthetase 1E [Source:MGI Symbol;Acc:MGI:2180856]
92. Gm16638 ENSMUSG00000087088 1 1 - - 1.000 - - - predicted gene, 16638 [Source:MGI Symbol;Acc:MGI:4439562]
93. Gm17750 ENSMUSG00000098087 25 1 1.000 - - - - - predicted gene, 17750 [Source:MGI Symbol;Acc:MGI:5009828]
94. 4931409K22Rik ENSMUSG00000038199 1 1 - - 1.000 - - - RIKEN cDNA 4931409K22 gene [Source:MGI Symbol;Acc:MGI:3045319]
95. Csf3 ENSMUSG00000038067 0 1 - - 1.000 - - - colony stimulating factor 3 (granulocyte) [Source:MGI Symbol;Acc:MGI:1339751]
96. Akr1b7 ENSMUSG00000052131 2 1 - - 1.000 - - - aldo-keto reductase family 1, member B7 [Source:MGI Symbol;Acc:MGI:101918]
97. AI317395 AI317395 2 1 - - 1.000 - - -
98. Sp9 ENSMUSG00000068859 60 1 - - 1.000 - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
99. Gm13828 ENSMUSG00000083182 2 1 - - 1.000 - - - predicted gene 13828 [Source:MGI Symbol;Acc:MGI:3651756]
100. Gm26397 ENSMUSG00000065637 1 1 1.000 - - - - - predicted gene, 26397 [Source:MGI Symbol;Acc:MGI:5456174]

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA