Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vrtn

Gene Name Gene ID Reads Annotation
Vrtn ENSMUSG00000071235 3 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]







Genes with expression patterns similar to Vrtn

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vrtn ENSMUSG00000071235 3 5 1.000 - 1.000 1.000 1.000 1.000 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]
2. Trap1a ENSMUSG00000051257 8 3.228 1.000 - 0.764 0.738 0.726 - tumor rejection antigen P1A [Source:MGI Symbol;Acc:MGI:98818]
3. Rbmxl2 ENSMUSG00000073894 15 2.533 1.000 - 0.824 - 0.709 - RNA binding motif protein, X-linked-like 2 [Source:MGI Symbol;Acc:MGI:1923822]
4. Gm8946 Gm8946 4 2 1.000 - - - - 1.000
5. Gm14425 ENSMUSG00000081156 4 2 1.000 - - - - 1.000 predicted gene 14425 [Source:MGI Symbol;Acc:MGI:3652020]
6. U90926 ENSMUSG00000029409 16 1.894 1.000 - 0.894 - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
7. Gbp2b ENSMUSG00000040264 14 1.89 0.890 - 1.000 - - - guanylate binding protein 2b [Source:MGI Symbol;Acc:MGI:95666]
8. Rnase6 ENSMUSG00000021880 4 1.866 1.000 - 0.866 - - - ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
9. Gm17067 ENSMUSG00000091594 8 1.791 - - 0.791 1.000 - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
10. Acvr1c ENSMUSG00000026834 20 1.772 1.000 - 0.772 - - - activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
11. Mnda 5 1.764 1.000 - 0.764 - - - myeloid cell nuclear differentiation antigen, transcript variant X1
12. Gm8935 ENSMUSG00000095661 6 1.763 1.000 - - - 0.763 - predicted pseudogene 8935 [Source:MGI Symbol;Acc:MGI:3643401]
13. Rhox6 ENSMUSG00000006200, ENSMUSG00000097200 24 1.738 1.000 - 0.738 - - - reproductive homeobox 6 [Source:MGI Symbol;Acc:MGI:1202888]
14. Hsd3b1 ENSMUSG00000027871 46 1.693 0.922 - - - - 0.771 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:MGI Symbol;Acc:MGI:96233]
15. Pla2g10 ENSMUSG00000022683 16 1.624 0.907 - 0.717 - - - phospholipase A2, group X [Source:MGI Symbol;Acc:MGI:1347522]
16. BC048679 ENSMUSG00000061877 8 1.581 - - 0.824 - 0.757 - cDNA sequence BC048679 [Source:MGI Symbol;Acc:MGI:3510776]
17. Tyr ENSMUSG00000004651 12 1.513 - - 0.750 - 0.763 - tyrosinase [Source:MGI Symbol;Acc:MGI:98880]
18. RP24-456G3.2 RP24-456G3.2 1 1 - - - - 1.000 -
19. Gm15197 ENSMUSG00000081873 10 1 1.000 - - - - - predicted gene 15197 [Source:MGI Symbol;Acc:MGI:3708123]
20. Fga ENSMUSG00000028001 637 1 - - - - - 1.000 fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
21. Ccdc83 ENSMUSG00000030617 2 1 1.000 - - - - - coiled-coil domain containing 83 [Source:MGI Symbol;Acc:MGI:1918255]
22. Gm14487 ENSMUSG00000085275 2 1 - - - 1.000 - - predicted gene 14487 [Source:MGI Symbol;Acc:MGI:3649724]
23. Gm21982 ENSMUSG00000094365 15 1 - - - 1.000 - - predicted gene 21982 [Source:MGI Symbol;Acc:MGI:5439451]
24. Grm1 ENSMUSG00000019828 8 1 - - - - 1.000 - glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338]
25. 4930426L09Rik ENSMUSG00000026736 4 1 1.000 - - - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
26. Ldhc ENSMUSG00000030851 2 1 - - - 1.000 - - lactate dehydrogenase C [Source:MGI Symbol;Acc:MGI:96764]
27. Vmn1r69 ENSMUSG00000091662 0 1 1.000 - - - - - vomeronasal 1 receptor 69 [Source:MGI Symbol;Acc:MGI:2182253]
28. Gm6526 ENSMUSG00000091698 1 1 1.000 - - - - - predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
29. 2310005G13Rik 2310005G13Rik 1 1 1.000 - - - - -
30. Gm15713 ENSMUSG00000085499 3 1 1.000 - - - - - predicted gene 15713 [Source:MGI Symbol;Acc:MGI:3783155]
31. 9930004E17Rik ENSMUSG00000096052, ENSMUSG00000115922 1 1 - - - - 1.000 - RIKEN cDNA 9930004E17 gene [Source:MGI Symbol;Acc:MGI:3603579]
32. Gm13357 ENSMUSG00000083650 0 1 1.000 - - - - - predicted gene 13357 [Source:MGI Symbol;Acc:MGI:3651263]
33. BC049352 ENSMUSG00000091996 5 1 - - - - - 1.000 cDNA sequence BC049352 [Source:MGI Symbol;Acc:MGI:3040681]
34. Gapdhs ENSMUSG00000061099 3 1 - - - - 1.000 - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:MGI Symbol;Acc:MGI:95653]
35. Fam110c ENSMUSG00000036136 6 1 - - - 1.000 - - family with sequence similarity 110, member C [Source:MGI Symbol;Acc:MGI:1918813]
36. Tmem217 ENSMUSG00000079580 1 1 1.000 - - - - - transmembrane protein 217 [Source:MGI Symbol;Acc:MGI:3646280]
37. Gm26732 ENSMUSG00000097344 5 1 1.000 - - - - - predicted gene, 26732 [Source:MGI Symbol;Acc:MGI:5477226]
38. A830035A12Rik ENSMUSG00000059706 2 1 - - - 1.000 - - RIKEN cDNA A830035A12 gene [Source:MGI Symbol;Acc:MGI:3045382]
39. Tex13 4 1 - - - - 1.000 - testis expressed gene 13
40. Gm8840 ENSMUSG00000084332 0 1 1.000 - - - - - predicted gene 8840 [Source:MGI Symbol;Acc:MGI:3647579]
41. Vmn2r88 ENSMUSG00000000606 2 1 1.000 - - - - - vomeronasal 2, receptor 88 [Source:MGI Symbol;Acc:MGI:1316662]
42. Fbxw4 ENSMUSG00000040913 3 1 - - - - 1.000 - F-box and WD-40 domain protein 4 [Source:MGI Symbol;Acc:MGI:1354698]
43. Gm2897 ENSMUSG00000079410 3 1 1.000 - - - - - predicted gene 2897 [Source:MGI Symbol;Acc:MGI:3781075]
44. A230005M16Rik ENSMUSG00000087612 12 1 - - - 1.000 - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
45. Rpl17-ps1 ENSMUSG00000082804, ENSMUSG00000103806 7 1 1.000 - - - - - ribosomal protein L17, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3652107]
46. 4732465J04Rik ENSMUSG00000101517 8 1 - - - 1.000 - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
47. Mageb4 ENSMUSG00000035427 1 1 - - - - 1.000 - melanoma antigen, family B, 4 [Source:MGI Symbol;Acc:MGI:2148568]
48. Mtl5 6 1 - - - - - 1.000 metallothionein-like 5, testis-specific (tesmin), transcript variant 4
49. Crtam ENSMUSG00000032021 6 1 - - - 1.000 - - cytotoxic and regulatory T cell molecule [Source:MGI Symbol;Acc:MGI:1859822]
50. Gm6116 ENSMUSG00000072874 0 1 - - - - - 1.000 predicted gene 6116 [Source:MGI Symbol;Acc:MGI:3644088]
51. Gm12762 ENSMUSG00000086526 3 1 1.000 - - - - - predicted gene 12762 [Source:MGI Symbol;Acc:MGI:3649976]
52. Pou5f1 ENSMUSG00000024406 2 1 - - - - - 1.000 POU domain, class 5, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101893]
53. Ltb ENSMUSG00000024399 2 1 - - 1.000 - - - lymphotoxin B [Source:MGI Symbol;Acc:MGI:104796]
54. Pkd1l1 ENSMUSG00000046634 6 1 1.000 - - - - - polycystic kidney disease 1 like 1 [Source:MGI Symbol;Acc:MGI:2156538]
55. RP23-307N19.2 RP23-307N19.2 0 1 1.000 - - - - -
56. Tmprss13 ENSMUSG00000037129 4 1 - - - - 1.000 - transmembrane protease, serine 13 [Source:MGI Symbol;Acc:MGI:2682935]
57. C8b ENSMUSG00000029656 12 1 - - - - - 1.000 complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
58. Tmem52 ENSMUSG00000023153 1 1 - - - - 1.000 - transmembrane protein 52 [Source:MGI Symbol;Acc:MGI:1916921]
59. Gm6276 ENSMUSG00000084025 32 1 - - - - - 1.000 predicted pseudogene 6276 [Source:MGI Symbol;Acc:MGI:3645369]
60. Gm7984 ENSMUSG00000049891 3 1 - - - - - 1.000 predicted gene 7984 [Source:MGI Symbol;Acc:MGI:3645839]
61. Gm15747 ENSMUSG00000086700 2 1 1.000 - - - - - predicted gene 15747 [Source:MGI Symbol;Acc:MGI:3783189]
62. Gm20644 ENSMUSG00000093673 8 1 1.000 - - - - - predicted gene 20644 [Source:MGI Symbol;Acc:MGI:5313091]
63. Gm26708 ENSMUSG00000097016 0 1 1.000 - - - - - predicted gene, 26708 [Source:MGI Symbol;Acc:MGI:5477202]
64. Cd207 ENSMUSG00000034783 3 1 - - - - - 1.000 CD207 antigen [Source:MGI Symbol;Acc:MGI:2180021]
65. Fam131c ENSMUSG00000006218 5 1 - - - - 1.000 - family with sequence similarity 131, member C [Source:MGI Symbol;Acc:MGI:2685539]
66. Gm7399 ENSMUSG00000091941 0 1 1.000 - - - - - predicted gene 7399 [Source:MGI Symbol;Acc:MGI:3647495]
67. Tex19.1 ENSMUSG00000039329 10 1 1.000 - - - - - testis expressed gene 19.1 [Source:MGI Symbol;Acc:MGI:1920929]
68. Gm2670 ENSMUSG00000097002 2 1 - - - - 1.000 - predicted gene 2670 [Source:MGI Symbol;Acc:MGI:3780839]
69. Snord69 ENSMUSG00000077212 0 1 1.000 - - - - - small nucleolar RNA, C/D box 69 [Source:MGI Symbol;Acc:MGI:3819551]
70. Gm13704 Gm13704 18 1 1.000 - - - - -
71. Gm13523 ENSMUSG00000087496 15 1 - - - - - 1.000 predicted gene 13523 [Source:MGI Symbol;Acc:MGI:3651426]
72. P2ry14 ENSMUSG00000036381 17 1 1.000 - - - - - purinergic receptor P2Y, G-protein coupled, 14 [Source:MGI Symbol;Acc:MGI:2155705]
73. Olfr1033 ENSMUSG00000045392 4 1 1.000 - - - - - olfactory receptor 1033 [Source:MGI Symbol;Acc:MGI:3030867]
74. Wfdc13 ENSMUSG00000067704 4 1 - - - - 1.000 - WAP four-disulfide core domain 13 [Source:MGI Symbol;Acc:MGI:3582777]
75. Taar6 ENSMUSG00000045111 0 1 1.000 - - - - - trace amine-associated receptor 6 [Source:MGI Symbol;Acc:MGI:2685074]
76. 4932435O22Rik ENSMUSG00000062391 3 1 - - - 1.000 - - RIKEN cDNA 4932435O22 gene [Source:MGI Symbol;Acc:MGI:2442791]
77. A430110L20Rik ENSMUSG00000054135 9 1 - - - 1.000 - - RIKEN cDNA A430110L20 gene [Source:MGI Symbol;Acc:MGI:3036249]
78. Rpl30-ps8 ENSMUSG00000062582 30 1 1.000 - - - - - ribosomal protein L30, pseudogene 8 [Source:MGI Symbol;Acc:MGI:3643509]
79. Tcl1 ENSMUSG00000041359 12 1 1.000 - - - - - T cell lymphoma breakpoint 1 [Source:MGI Symbol;Acc:MGI:1097166]
80. Gdf15 ENSMUSG00000038508 10 1 - - - - - 1.000 growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
81. Gm12871 ENSMUSG00000082200 0 1 - - - - - 1.000 predicted gene 12871 [Source:MGI Symbol;Acc:MGI:3649219]
82. Gm24035 ENSMUSG00000064801 0 1 1.000 - - - - - predicted gene, 24035 [Source:MGI Symbol;Acc:MGI:5453812]
83. Cdh18 ENSMUSG00000040420 3 1 1.000 - - - - - cadherin 18 [Source:MGI Symbol;Acc:MGI:1344366]
84. Nlrp4d ENSMUSG00000034122 1 1 1.000 - - - - - NLR family, pyrin domain containing 4D [Source:MGI Symbol;Acc:MGI:3056574]
85. Rps24-ps2 ENSMUSG00000069125 7 1 1.000 - - - - - ribosomal protein S24, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649025]
86. Gm7670 ENSMUSG00000082608 3 1 1.000 - - - - - predicted gene 7670 [Source:MGI Symbol;Acc:MGI:3648912]
87. Gm13740 ENSMUSG00000082417 1 1 - - - - - 1.000 predicted gene 13740 [Source:MGI Symbol;Acc:MGI:3649209]
88. Slc5a10 ENSMUSG00000042371 2 1 - - - - 1.000 - solute carrier family 5 (sodium/glucose cotransporter), member 10 [Source:MGI Symbol;Acc:MGI:1926089]
89. Smco1 ENSMUSG00000046345 1 1 - - - - - 1.000 single-pass membrane protein with coiled-coil domains 1 [Source:MGI Symbol;Acc:MGI:1916826]
90. Bmp8b ENSMUSG00000002384 7 1 - - - - - 1.000 bone morphogenetic protein 8b [Source:MGI Symbol;Acc:MGI:107335]
91. Gm20379 ENSMUSG00000100622 1 1 - - - - 1.000 - predicted gene, 20379 [Source:MGI Symbol;Acc:MGI:5012564]
92. Gm10497 Gm10497 2 1 - - - - - 1.000
93. Arl14epl ENSMUSG00000073568 3 1 1.000 - - - - - ADP-ribosylation factor-like 14 effector protein-like [Source:MGI Symbol;Acc:MGI:2685795]
94. Slc24a1 ENSMUSG00000034452 11 1 - - - - - 1.000 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:2384871]
95. Htr6 ENSMUSG00000028747 3 1 1.000 - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:MGI Symbol;Acc:MGI:1196627]
96. Aqp5 ENSMUSG00000044217 3 1 - - - - - 1.000 aquaporin 5 [Source:MGI Symbol;Acc:MGI:106215]
97. Npffr1 ENSMUSG00000020090 1 1 - - - - 1.000 - neuropeptide FF receptor 1 [Source:MGI Symbol;Acc:MGI:2685082]
98. Slco4c1 ENSMUSG00000040693 1 1 1.000 - - - - - solute carrier organic anion transporter family, member 4C1 [Source:MGI Symbol;Acc:MGI:2442784]
99. Hoxa11 ENSMUSG00000038210 2 1 - - - - 1.000 - homeobox A11 [Source:MGI Symbol;Acc:MGI:96172]
100. Mpp4 ENSMUSG00000079550 1 1 - - - - 1.000 - membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) [Source:MGI Symbol;Acc:MGI:2386681]

There are 331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA