Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vrtn

Gene Name Gene ID Reads Annotation
Vrtn ENSMUSG00000071235 3 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]







Genes with expression patterns similar to Vrtn

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vrtn ENSMUSG00000071235 3 5 1.000 - 1.000 1.000 1.000 1.000 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]
2. Trap1a ENSMUSG00000051257 8 3.228 1.000 - 0.764 0.738 0.726 - tumor rejection antigen P1A [Source:MGI Symbol;Acc:MGI:98818]
3. Rbmxl2 ENSMUSG00000073894 15 2.533 1.000 - 0.824 - 0.709 - RNA binding motif protein, X-linked-like 2 [Source:MGI Symbol;Acc:MGI:1923822]
4. Gm8946 Gm8946 4 2 1.000 - - - - 1.000
5. Gm14425 ENSMUSG00000081156 4 2 1.000 - - - - 1.000 predicted gene 14425 [Source:MGI Symbol;Acc:MGI:3652020]
6. U90926 ENSMUSG00000029409 16 1.894 1.000 - 0.894 - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
7. Gbp2b ENSMUSG00000040264 14 1.89 0.890 - 1.000 - - - guanylate binding protein 2b [Source:MGI Symbol;Acc:MGI:95666]
8. Rnase6 ENSMUSG00000021880 4 1.866 1.000 - 0.866 - - - ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
9. Gm17067 ENSMUSG00000091594 8 1.791 - - 0.791 1.000 - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
10. Acvr1c ENSMUSG00000026834 20 1.772 1.000 - 0.772 - - - activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
11. Mnda 5 1.764 1.000 - 0.764 - - - myeloid cell nuclear differentiation antigen, transcript variant X1
12. Gm8935 ENSMUSG00000095661 6 1.763 1.000 - - - 0.763 - predicted pseudogene 8935 [Source:MGI Symbol;Acc:MGI:3643401]
13. Rhox6 ENSMUSG00000006200, ENSMUSG00000097200 24 1.738 1.000 - 0.738 - - - reproductive homeobox 6 [Source:MGI Symbol;Acc:MGI:1202888]
14. Hsd3b1 ENSMUSG00000027871 46 1.693 0.922 - - - - 0.771 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:MGI Symbol;Acc:MGI:96233]
15. Pla2g10 ENSMUSG00000022683 16 1.624 0.907 - 0.717 - - - phospholipase A2, group X [Source:MGI Symbol;Acc:MGI:1347522]
16. BC048679 ENSMUSG00000061877 8 1.581 - - 0.824 - 0.757 - cDNA sequence BC048679 [Source:MGI Symbol;Acc:MGI:3510776]
17. Tyr ENSMUSG00000004651 12 1.513 - - 0.750 - 0.763 - tyrosinase [Source:MGI Symbol;Acc:MGI:98880]
18. RP23-307N19.2 RP23-307N19.2 0 1 1.000 - - - - -
19. Tmprss13 ENSMUSG00000037129 4 1 - - - - 1.000 - transmembrane protease, serine 13 [Source:MGI Symbol;Acc:MGI:2682935]
20. Gm12762 ENSMUSG00000086526 3 1 1.000 - - - - - predicted gene 12762 [Source:MGI Symbol;Acc:MGI:3649976]
21. Mtl5 6 1 - - - - - 1.000 metallothionein-like 5, testis-specific (tesmin), transcript variant 4
22. Gm6116 ENSMUSG00000072874 0 1 - - - - - 1.000 predicted gene 6116 [Source:MGI Symbol;Acc:MGI:3644088]
23. Crtam ENSMUSG00000032021 6 1 - - - 1.000 - - cytotoxic and regulatory T cell molecule [Source:MGI Symbol;Acc:MGI:1859822]
24. Ltb ENSMUSG00000024399 2 1 - - 1.000 - - - lymphotoxin B [Source:MGI Symbol;Acc:MGI:104796]
25. Pkd1l1 ENSMUSG00000046634 6 1 1.000 - - - - - polycystic kidney disease 1 like 1 [Source:MGI Symbol;Acc:MGI:2156538]
26. Pou5f1 ENSMUSG00000024406 2 1 - - - - - 1.000 POU domain, class 5, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101893]
27. 4732465J04Rik ENSMUSG00000101517 8 1 - - - 1.000 - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
28. A230005M16Rik ENSMUSG00000087612 12 1 - - - 1.000 - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
29. Rpl17-ps1 ENSMUSG00000082804, ENSMUSG00000103806 7 1 1.000 - - - - - ribosomal protein L17, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3652107]
30. Mageb4 ENSMUSG00000035427 1 1 - - - - 1.000 - melanoma antigen, family B, 4 [Source:MGI Symbol;Acc:MGI:2148568]
31. Gm2897 ENSMUSG00000079410 3 1 1.000 - - - - - predicted gene 2897 [Source:MGI Symbol;Acc:MGI:3781075]
32. Fbxw4 ENSMUSG00000040913 3 1 - - - - 1.000 - F-box and WD-40 domain protein 4 [Source:MGI Symbol;Acc:MGI:1354698]
33. Gm2670 ENSMUSG00000097002 2 1 - - - - 1.000 - predicted gene 2670 [Source:MGI Symbol;Acc:MGI:3780839]
34. Snord69 ENSMUSG00000077212 0 1 1.000 - - - - - small nucleolar RNA, C/D box 69 [Source:MGI Symbol;Acc:MGI:3819551]
35. Gm7399 ENSMUSG00000091941 0 1 1.000 - - - - - predicted gene 7399 [Source:MGI Symbol;Acc:MGI:3647495]
36. Tex19.1 ENSMUSG00000039329 10 1 1.000 - - - - - testis expressed gene 19.1 [Source:MGI Symbol;Acc:MGI:1920929]
37. Gm26708 ENSMUSG00000097016 0 1 1.000 - - - - - predicted gene, 26708 [Source:MGI Symbol;Acc:MGI:5477202]
38. Cd207 ENSMUSG00000034783 3 1 - - - - - 1.000 CD207 antigen [Source:MGI Symbol;Acc:MGI:2180021]
39. Gm20644 ENSMUSG00000093673 8 1 1.000 - - - - - predicted gene 20644 [Source:MGI Symbol;Acc:MGI:5313091]
40. Fam131c ENSMUSG00000006218 5 1 - - - - 1.000 - family with sequence similarity 131, member C [Source:MGI Symbol;Acc:MGI:2685539]
41. C8b ENSMUSG00000029656 12 1 - - - - - 1.000 complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
42. Gm6276 ENSMUSG00000084025 32 1 - - - - - 1.000 predicted pseudogene 6276 [Source:MGI Symbol;Acc:MGI:3645369]
43. Tmem52 ENSMUSG00000023153 1 1 - - - - 1.000 - transmembrane protein 52 [Source:MGI Symbol;Acc:MGI:1916921]
44. Gm15747 ENSMUSG00000086700 2 1 1.000 - - - - - predicted gene 15747 [Source:MGI Symbol;Acc:MGI:3783189]
45. Gm7984 ENSMUSG00000049891 3 1 - - - - - 1.000 predicted gene 7984 [Source:MGI Symbol;Acc:MGI:3645839]
46. 2310005G13Rik 2310005G13Rik 1 1 1.000 - - - - -
47. Gm15713 ENSMUSG00000085499 3 1 1.000 - - - - - predicted gene 15713 [Source:MGI Symbol;Acc:MGI:3783155]
48. BC049352 ENSMUSG00000091996 5 1 - - - - - 1.000 cDNA sequence BC049352 [Source:MGI Symbol;Acc:MGI:3040681]
49. Gm13357 ENSMUSG00000083650 0 1 1.000 - - - - - predicted gene 13357 [Source:MGI Symbol;Acc:MGI:3651263]
50. 9930004E17Rik ENSMUSG00000096052, ENSMUSG00000115922 1 1 - - - - 1.000 - RIKEN cDNA 9930004E17 gene [Source:MGI Symbol;Acc:MGI:3603579]
51. 4930426L09Rik ENSMUSG00000026736 4 1 1.000 - - - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
52. Gm21982 ENSMUSG00000094365 15 1 - - - 1.000 - - predicted gene 21982 [Source:MGI Symbol;Acc:MGI:5439451]
53. Grm1 ENSMUSG00000019828 8 1 - - - - 1.000 - glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338]
54. Gm14487 ENSMUSG00000085275 2 1 - - - 1.000 - - predicted gene 14487 [Source:MGI Symbol;Acc:MGI:3649724]
55. Vmn1r69 ENSMUSG00000091662 0 1 1.000 - - - - - vomeronasal 1 receptor 69 [Source:MGI Symbol;Acc:MGI:2182253]
56. Gm6526 ENSMUSG00000091698 1 1 1.000 - - - - - predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
57. Ldhc ENSMUSG00000030851 2 1 - - - 1.000 - - lactate dehydrogenase C [Source:MGI Symbol;Acc:MGI:96764]
58. Fga ENSMUSG00000028001 637 1 - - - - - 1.000 fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
59. Ccdc83 ENSMUSG00000030617 2 1 1.000 - - - - - coiled-coil domain containing 83 [Source:MGI Symbol;Acc:MGI:1918255]
60. RP24-456G3.2 RP24-456G3.2 1 1 - - - - 1.000 -
61. Gm15197 ENSMUSG00000081873 10 1 1.000 - - - - - predicted gene 15197 [Source:MGI Symbol;Acc:MGI:3708123]
62. A830035A12Rik ENSMUSG00000059706 2 1 - - - 1.000 - - RIKEN cDNA A830035A12 gene [Source:MGI Symbol;Acc:MGI:3045382]
63. Tex13 4 1 - - - - 1.000 - testis expressed gene 13
64. Vmn2r88 ENSMUSG00000000606 2 1 1.000 - - - - - vomeronasal 2, receptor 88 [Source:MGI Symbol;Acc:MGI:1316662]
65. Gm8840 ENSMUSG00000084332 0 1 1.000 - - - - - predicted gene 8840 [Source:MGI Symbol;Acc:MGI:3647579]
66. Gm26732 ENSMUSG00000097344 5 1 1.000 - - - - - predicted gene, 26732 [Source:MGI Symbol;Acc:MGI:5477226]
67. Gapdhs ENSMUSG00000061099 3 1 - - - - 1.000 - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:MGI Symbol;Acc:MGI:95653]
68. Fam110c ENSMUSG00000036136 6 1 - - - 1.000 - - family with sequence similarity 110, member C [Source:MGI Symbol;Acc:MGI:1918813]
69. Tmem217 ENSMUSG00000079580 1 1 1.000 - - - - - transmembrane protein 217 [Source:MGI Symbol;Acc:MGI:3646280]
70. Gm27003 ENSMUSG00000098024 5 1 - - - - 1.000 - predicted gene, 27003 [Source:MGI Symbol;Acc:MGI:5504118]
71. Cpn2 ENSMUSG00000023176 3 1 - - - - 1.000 - carboxypeptidase N, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1919006]
72. Dnaja4 ENSMUSG00000032285 6 1 1.000 - - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:MGI Symbol;Acc:MGI:1927638]
73. Rpl23a ENSMUSG00000058546 15 1 - - - 1.000 - - ribosomal protein L23A [Source:MGI Symbol;Acc:MGI:3040672]
74. Spink4 ENSMUSG00000028415 0 1 - - - - - 1.000 serine peptidase inhibitor, Kazal type 4 [Source:MGI Symbol;Acc:MGI:1341848]
75. Tnfrsf17 ENSMUSG00000022496 2 1 - - - - 1.000 - tumor necrosis factor receptor superfamily, member 17 [Source:MGI Symbol;Acc:MGI:1343050]
76. Gm10571 ENSMUSG00000073753 5 1 1.000 - - - - - predicted gene 10571 [Source:MGI Symbol;Acc:MGI:3708701]
77. Bmx ENSMUSG00000031377 31 1 1.000 - - - - - BMX non-receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:1101778]
78. Olfr1055 ENSMUSG00000075189 0 1 1.000 - - - - - olfactory receptor 1055 [Source:MGI Symbol;Acc:MGI:3030889]
79. Gpr82 ENSMUSG00000047678 0 1 1.000 - - - - - G protein-coupled receptor 82 [Source:MGI Symbol;Acc:MGI:2441734]
80. Dsg1a ENSMUSG00000069441 3 1 - - - - - 1.000 desmoglein 1 alpha [Source:MGI Symbol;Acc:MGI:94930]
81. Bhlha9 ENSMUSG00000044243 27 1 - - - - 1.000 - basic helix-loop-helix family, member a9 [Source:MGI Symbol;Acc:MGI:2444198]
82. Gm8752 ENSMUSG00000092278 0 1 - - - - - 1.000 predicted pseudogene 8752 [Source:MGI Symbol;Acc:MGI:3647539]
83. Gm25896 ENSMUSG00000065647 9 1 - - - 1.000 - - predicted gene, 25896 [Source:MGI Symbol;Acc:MGI:5455673]
84. Gng13 ENSMUSG00000025739 11 1 - - - - - 1.000 guanine nucleotide binding protein (G protein), gamma 13 [Source:MGI Symbol;Acc:MGI:1925616]
85. Ccdc142 ENSMUSG00000107499 18 1 - - - 1.000 - - coiled-coil domain containing 142 [Source:MGI Symbol;Acc:MGI:3045292]
86. Wbscr25 ENSMUSG00000054909 10 1 - - - - 1.000 - Williams Beuren syndrome chromosome region 25 (human) [Source:MGI Symbol;Acc:MGI:1918554]
87. Gm26131 ENSMUSG00000064659 2 1 - - - - 1.000 - predicted gene, 26131 [Source:MGI Symbol;Acc:MGI:5455908]
88. Ppp1r1b ENSMUSG00000061718 2 1 1.000 - - - - - protein phosphatase 1, regulatory inhibitor subunit 1B [Source:MGI Symbol;Acc:MGI:94860]
89. Ankk1 ENSMUSG00000032257 1 1 - - - - 1.000 - ankyrin repeat and kinase domain containing 1 [Source:MGI Symbol;Acc:MGI:3045301]
90. 6030468B19Rik ENSMUSG00000025573 6 1 - - - - - 1.000 RIKEN cDNA 6030468B19 gene [Source:MGI Symbol;Acc:MGI:1924977]
91. Pkp1 ENSMUSG00000026413 5 1 1.000 - - - - - plakophilin 1 [Source:MGI Symbol;Acc:MGI:1328359]
92. Adcy3 ENSMUSG00000020654 7 1 - - - 1.000 - - adenylate cyclase 3 [Source:MGI Symbol;Acc:MGI:99675]
93. Gm10485 Gm10485 3 1 - - - - 1.000 -
94. Krt28 ENSMUSG00000055937 4 1 1.000 - - - - - keratin 28 [Source:MGI Symbol;Acc:MGI:1918093]
95. B4galnt2 ENSMUSG00000013418 1 1 - - - - 1.000 - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
96. 1110046J04Rik ENSMUSG00000085457 36 1 - - - - - 1.000 RIKEN cDNA 1110046J04 gene [Source:MGI Symbol;Acc:MGI:1916058]
97. Mia2 ENSMUSG00000021000 2 1 - - - 1.000 - - melanoma inhibitory activity 2 [Source:MGI Symbol;Acc:MGI:2159614]
98. Gm24147 ENSMUSG00000064697 1 1 - - - - - 1.000 predicted gene, 24147 [Source:MGI Symbol;Acc:MGI:5453924]
99. Cdh18 ENSMUSG00000040420 3 1 1.000 - - - - - cadherin 18 [Source:MGI Symbol;Acc:MGI:1344366]
100. Tcl1 ENSMUSG00000041359 12 1 1.000 - - - - - T cell lymphoma breakpoint 1 [Source:MGI Symbol;Acc:MGI:1097166]

There are 331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA