Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vrtn

Gene Name Gene ID Reads Annotation
Vrtn ENSMUSG00000071235 3 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]







Genes with expression patterns similar to Vrtn

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vrtn ENSMUSG00000071235 3 5 1.000 - 1.000 1.000 1.000 1.000 vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]
2. Trap1a ENSMUSG00000051257 8 3.228 1.000 - 0.764 0.738 0.726 - tumor rejection antigen P1A [Source:MGI Symbol;Acc:MGI:98818]
3. Rbmxl2 ENSMUSG00000073894 15 2.533 1.000 - 0.824 - 0.709 - RNA binding motif protein, X-linked-like 2 [Source:MGI Symbol;Acc:MGI:1923822]
4. Gm14425 ENSMUSG00000081156 4 2 1.000 - - - - 1.000 predicted gene 14425 [Source:MGI Symbol;Acc:MGI:3652020]
5. Gm8946 Gm8946 4 2 1.000 - - - - 1.000
6. U90926 ENSMUSG00000029409 16 1.894 1.000 - 0.894 - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
7. Gbp2b ENSMUSG00000040264 14 1.89 0.890 - 1.000 - - - guanylate binding protein 2b [Source:MGI Symbol;Acc:MGI:95666]
8. Rnase6 ENSMUSG00000021880 4 1.866 1.000 - 0.866 - - - ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
9. Gm17067 ENSMUSG00000091594 8 1.791 - - 0.791 1.000 - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
10. Acvr1c ENSMUSG00000026834 20 1.772 1.000 - 0.772 - - - activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
11. Mnda 5 1.764 1.000 - 0.764 - - - myeloid cell nuclear differentiation antigen, transcript variant X1
12. Gm8935 ENSMUSG00000095661 6 1.763 1.000 - - - 0.763 - predicted pseudogene 8935 [Source:MGI Symbol;Acc:MGI:3643401]
13. Rhox6 ENSMUSG00000006200, ENSMUSG00000097200 24 1.738 1.000 - 0.738 - - - reproductive homeobox 6 [Source:MGI Symbol;Acc:MGI:1202888]
14. Hsd3b1 ENSMUSG00000027871 46 1.693 0.922 - - - - 0.771 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:MGI Symbol;Acc:MGI:96233]
15. Pla2g10 ENSMUSG00000022683 16 1.624 0.907 - 0.717 - - - phospholipase A2, group X [Source:MGI Symbol;Acc:MGI:1347522]
16. BC048679 ENSMUSG00000061877 8 1.581 - - 0.824 - 0.757 - cDNA sequence BC048679 [Source:MGI Symbol;Acc:MGI:3510776]
17. Tyr ENSMUSG00000004651 12 1.513 - - 0.750 - 0.763 - tyrosinase [Source:MGI Symbol;Acc:MGI:98880]
18. Spata21 ENSMUSG00000045004 3 1 1.000 - - - - - spermatogenesis associated 21 [Source:MGI Symbol;Acc:MGI:3607787]
19. Sytl5 ENSMUSG00000054453 2 1 1.000 - - - - - synaptotagmin-like 5 [Source:MGI Symbol;Acc:MGI:2668451]
20. Gm20644 ENSMUSG00000093673 8 1 1.000 - - - - - predicted gene 20644 [Source:MGI Symbol;Acc:MGI:5313091]
21. Gm15577 ENSMUSG00000086708 2 1 - - - - - 1.000 predicted gene 15577 [Source:MGI Symbol;Acc:MGI:3783025]
22. Tmem253 ENSMUSG00000072571 2 1 - - - - 1.000 - transmembrane protein 253 [Source:MGI Symbol;Acc:MGI:3588246]
23. 1110046J04Rik ENSMUSG00000085457 36 1 - - - - - 1.000 RIKEN cDNA 1110046J04 gene [Source:MGI Symbol;Acc:MGI:1916058]
24. Gm15713 ENSMUSG00000085499 3 1 1.000 - - - - - predicted gene 15713 [Source:MGI Symbol;Acc:MGI:3783155]
25. Aqp5 ENSMUSG00000044217 3 1 - - - - - 1.000 aquaporin 5 [Source:MGI Symbol;Acc:MGI:106215]
26. Slc22a28 ENSMUSG00000063590 3 1 - - - - - 1.000 solute carrier family 22, member 28 [Source:MGI Symbol;Acc:MGI:3645714]
27. Gm11149 ENSMUSG00000079564 0 1 1.000 - - - - - predicted gene 11149 [Source:MGI Symbol;Acc:MGI:3642683]
28. Rpl30-ps8 ENSMUSG00000062582 30 1 1.000 - - - - - ribosomal protein L30, pseudogene 8 [Source:MGI Symbol;Acc:MGI:3643509]
29. Rpl17-ps1 ENSMUSG00000082804, ENSMUSG00000103806 7 1 1.000 - - - - - ribosomal protein L17, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3652107]
30. 1700080O16Rik ENSMUSG00000031118 1 1 - - - - 1.000 - RIKEN cDNA 1700080O16 gene [Source:MGI Symbol;Acc:MGI:1921529]
31. Cxcl11 ENSMUSG00000060183 3 1 - - - - - 1.000 chemokine (C-X-C motif) ligand 11 [Source:MGI Symbol;Acc:MGI:1860203]
32. Ccdc146 ENSMUSG00000064280 65 1 - - - - 1.000 - coiled-coil domain containing 146 [Source:MGI Symbol;Acc:MGI:1922422]
33. Slc5a10 ENSMUSG00000042371 2 1 - - - - 1.000 - solute carrier family 5 (sodium/glucose cotransporter), member 10 [Source:MGI Symbol;Acc:MGI:1926089]
34. Fbxw4 ENSMUSG00000040913 3 1 - - - - 1.000 - F-box and WD-40 domain protein 4 [Source:MGI Symbol;Acc:MGI:1354698]
35. Gm7951 ENSMUSG00000095490 1 1 - - - - 1.000 - predicted gene 7951 [Source:MGI Symbol;Acc:MGI:3648771]
36. Cd207 ENSMUSG00000034783 3 1 - - - - - 1.000 CD207 antigen [Source:MGI Symbol;Acc:MGI:2180021]
37. Gm27003 ENSMUSG00000098024 5 1 - - - - 1.000 - predicted gene, 27003 [Source:MGI Symbol;Acc:MGI:5504118]
38. Tmem217 ENSMUSG00000079580 1 1 1.000 - - - - - transmembrane protein 217 [Source:MGI Symbol;Acc:MGI:3646280]
39. Bhlha9 ENSMUSG00000044243 27 1 - - - - 1.000 - basic helix-loop-helix family, member a9 [Source:MGI Symbol;Acc:MGI:2444198]
40. Hoxa11 ENSMUSG00000038210 2 1 - - - - 1.000 - homeobox A11 [Source:MGI Symbol;Acc:MGI:96172]
41. Gm6526 ENSMUSG00000091698 1 1 1.000 - - - - - predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
42. 9930004E17Rik ENSMUSG00000096052, ENSMUSG00000115922 1 1 - - - - 1.000 - RIKEN cDNA 9930004E17 gene [Source:MGI Symbol;Acc:MGI:3603579]
43. Nlrp4d ENSMUSG00000034122 1 1 1.000 - - - - - NLR family, pyrin domain containing 4D [Source:MGI Symbol;Acc:MGI:3056574]
44. RP24-456G3.2 RP24-456G3.2 1 1 - - - - 1.000 -
45. Tdh ENSMUSG00000021953 82 1 1.000 - - - - - L-threonine dehydrogenase [Source:MGI Symbol;Acc:MGI:1926231]
46. Gm24443 ENSMUSG00000087867 1 1 - - - 1.000 - - predicted gene, 24443 [Source:MGI Symbol;Acc:MGI:5454220]
47. Ccdc64b 0 1 - - - - - 1.000 coiled-coil domain containing 64B, transcript variant X1
48. Gm2670 ENSMUSG00000097002 2 1 - - - - 1.000 - predicted gene 2670 [Source:MGI Symbol;Acc:MGI:3780839]
49. A830035A12Rik ENSMUSG00000059706 2 1 - - - 1.000 - - RIKEN cDNA A830035A12 gene [Source:MGI Symbol;Acc:MGI:3045382]
50. Traf1 ENSMUSG00000026875 9 1 1.000 - - - - - TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
51. Prdm14 ENSMUSG00000042414 2 1 1.000 - - - - - PR domain containing 14 [Source:MGI Symbol;Acc:MGI:3588194]
52. Tmem82 ENSMUSG00000043085 8 1 - - - - - 1.000 transmembrane protein 82 [Source:MGI Symbol;Acc:MGI:2384869]
53. Dsg3 ENSMUSG00000056632 2 1 1.000 - - - - - desmoglein 3 [Source:MGI Symbol;Acc:MGI:99499]
54. Cdh18 ENSMUSG00000040420 3 1 1.000 - - - - - cadherin 18 [Source:MGI Symbol;Acc:MGI:1344366]
55. Gm13740 ENSMUSG00000082417 1 1 - - - - - 1.000 predicted gene 13740 [Source:MGI Symbol;Acc:MGI:3649209]
56. Gm11224 ENSMUSG00000084342 1 1 1.000 - - - - - predicted gene 11224 [Source:MGI Symbol;Acc:MGI:3651640]
57. Sdr42e1 ENSMUSG00000034308 2 1 1.000 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:MGI Symbol;Acc:MGI:1921282]
58. 6030468B19Rik ENSMUSG00000025573 6 1 - - - - - 1.000 RIKEN cDNA 6030468B19 gene [Source:MGI Symbol;Acc:MGI:1924977]
59. Nr0b2 ENSMUSG00000037583 5 1 - - - - 1.000 - nuclear receptor subfamily 0, group B, member 2 [Source:MGI Symbol;Acc:MGI:1346344]
60. Cd247 ENSMUSG00000005763 3 1 1.000 - - - - - CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
61. Smco1 ENSMUSG00000046345 1 1 - - - - - 1.000 single-pass membrane protein with coiled-coil domains 1 [Source:MGI Symbol;Acc:MGI:1916826]
62. Abcb1a ENSMUSG00000040584 5 1 - - - - - 1.000 ATP-binding cassette, sub-family B (MDR/TAP), member 1A [Source:MGI Symbol;Acc:MGI:97570]
63. Gm13523 ENSMUSG00000087496 15 1 - - - - - 1.000 predicted gene 13523 [Source:MGI Symbol;Acc:MGI:3651426]
64. Gm8752 ENSMUSG00000092278 0 1 - - - - - 1.000 predicted pseudogene 8752 [Source:MGI Symbol;Acc:MGI:3647539]
65. Slc46a2 ENSMUSG00000028386 10 1 1.000 - - - - - solute carrier family 46, member 2 [Source:MGI Symbol;Acc:MGI:1353616]
66. Gm12010 ENSMUSG00000083292 1 1 - - - 1.000 - - predicted gene 12010 [Source:MGI Symbol;Acc:MGI:3651312]
67. Gm7984 ENSMUSG00000049891 3 1 - - - - - 1.000 predicted gene 7984 [Source:MGI Symbol;Acc:MGI:3645839]
68. Gm21982 ENSMUSG00000094365 15 1 - - - 1.000 - - predicted gene 21982 [Source:MGI Symbol;Acc:MGI:5439451]
69. Gm20478 ENSMUSG00000092474 5 1 - - - - 1.000 - predicted gene 20478 [Source:MGI Symbol;Acc:MGI:5141943]
70. Adcy3 ENSMUSG00000020654 7 1 - - - 1.000 - - adenylate cyclase 3 [Source:MGI Symbol;Acc:MGI:99675]
71. Crtam ENSMUSG00000032021 6 1 - - - 1.000 - - cytotoxic and regulatory T cell molecule [Source:MGI Symbol;Acc:MGI:1859822]
72. Gm10571 ENSMUSG00000073753 5 1 1.000 - - - - - predicted gene 10571 [Source:MGI Symbol;Acc:MGI:3708701]
73. Grm1 ENSMUSG00000019828 8 1 - - - - 1.000 - glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338]
74. Ifi27 ENSMUSG00000064215 38 1 1.000 - - - - - interferon, alpha-inducible protein 27 [Source:MGI Symbol;Acc:MGI:1277180]
75. 9830144P21Rik ENSMUSG00000087528 1 1 - - - - 1.000 - RIKEN cDNA 9830144P21 gene [Source:MGI Symbol;Acc:MGI:3041171]
76. Gm8864 ENSMUSG00000081892 8 1 1.000 - - - - - predicted gene 8864 [Source:MGI Symbol;Acc:MGI:3644830]
77. Gdf15 ENSMUSG00000038508 10 1 - - - - - 1.000 growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
78. Gm14168 ENSMUSG00000055494 6 1 1.000 - - - - - predicted gene 14168 [Source:MGI Symbol;Acc:MGI:3651463]
79. Gm20899 Gm20899 26 1 - - - 1.000 - -
80. Ltb ENSMUSG00000024399 2 1 - - 1.000 - - - lymphotoxin B [Source:MGI Symbol;Acc:MGI:104796]
81. Olfr1055 ENSMUSG00000075189 0 1 1.000 - - - - - olfactory receptor 1055 [Source:MGI Symbol;Acc:MGI:3030889]
82. Gm25896 ENSMUSG00000065647 9 1 - - - 1.000 - - predicted gene, 25896 [Source:MGI Symbol;Acc:MGI:5455673]
83. Gm6276 ENSMUSG00000084025 32 1 - - - - - 1.000 predicted pseudogene 6276 [Source:MGI Symbol;Acc:MGI:3645369]
84. Gm25197 ENSMUSG00000095943 3 1 - - - - - 1.000 predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
85. Tnfrsf17 ENSMUSG00000022496 2 1 - - - - 1.000 - tumor necrosis factor receptor superfamily, member 17 [Source:MGI Symbol;Acc:MGI:1343050]
86. A230005M16Rik ENSMUSG00000087612 12 1 - - - 1.000 - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
87. Gm10163 ENSMUSG00000066443 2 1 1.000 - - - - - predicted pseudogene 10163 [Source:MGI Symbol;Acc:MGI:3704341]
88. Gm16120 ENSMUSG00000087248 1 1 - - - - 1.000 - predicted gene 16120 [Source:MGI Symbol;Acc:MGI:3802132]
89. Mir3063 ENSMUSG00000093358 1 1 - - - - 1.000 - microRNA 3063 [Source:MGI Symbol;Acc:MGI:4834235]
90. Tex13 4 1 - - - - 1.000 - testis expressed gene 13
91. Trpc6 ENSMUSG00000031997 13 1 - - - 1.000 - - transient receptor potential cation channel, subfamily C, member 6 [Source:MGI Symbol;Acc:MGI:109523]
92. Gm7670 ENSMUSG00000082608 3 1 1.000 - - - - - predicted gene 7670 [Source:MGI Symbol;Acc:MGI:3648912]
93. 7530420F21Rik 7530420F21Rik 6 1 - - - - - 1.000
94. Ssxb2 ENSMUSG00000023165 1 1 - - - 1.000 - - synovial sarcoma, X member B2 [Source:MGI Symbol;Acc:MGI:2446771]
95. Vmn2r88 ENSMUSG00000000606 2 1 1.000 - - - - - vomeronasal 2, receptor 88 [Source:MGI Symbol;Acc:MGI:1316662]
96. Gpr141 ENSMUSG00000053101 5 1 - - - - 1.000 - G protein-coupled receptor 141 [Source:MGI Symbol;Acc:MGI:2672983]
97. Gm9933 Gm9933 0 1 1.000 - - - - -
98. Gm26848 ENSMUSG00000097723 1 1 - - - - - 1.000 predicted gene, 26848 [Source:MGI Symbol;Acc:MGI:5477342]
99. Rpl23a ENSMUSG00000058546 15 1 - - - 1.000 - - ribosomal protein L23A [Source:MGI Symbol;Acc:MGI:3040672]
100. Gm15673 Gm15673 5 1 - - - 1.000 - -

There are 331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA