Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vps54

Gene Name Gene ID Reads Annotation
Vps54 ENSMUSG00000020128 980 VPS54 GARP complex subunit [Source:MGI Symbol;Acc:MGI:2178798]







Genes with expression patterns similar to Vps54

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vps54 ENSMUSG00000020128 980 6 1.000 1.000 1.000 1.000 1.000 1.000 VPS54 GARP complex subunit [Source:MGI Symbol;Acc:MGI:2178798]
2. Ndfip1 ENSMUSG00000024425 231 1.628 0.871 - 0.757 - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
3. 2310045N01Rik 2310045N01Rik 627 1.603 0.857 - - - - 0.746
4. Polr3a ENSMUSG00000025280 489 0.898 0.898 - - - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:2681836]
5. Ikzf4 ENSMUSG00000002578 522 0.895 0.895 - - - - - IKAROS family zinc finger 4 [Source:MGI Symbol;Acc:MGI:1343139]
6. Brox ENSMUSG00000046836 1657 0.887 0.887 - - - - - BRO1 domain and CAAX motif containing [Source:MGI Symbol;Acc:MGI:1918928]
7. Gm16459 ENSMUSG00000084022 255 0.887 0.887 - - - - - predicted gene 16459 [Source:MGI Symbol;Acc:MGI:3644110]
8. 1700021F05Rik ENSMUSG00000019797 407 0.886 0.886 - - - - - RIKEN cDNA 1700021F05 gene [Source:MGI Symbol;Acc:MGI:1915101]
9. Klhl6 ENSMUSG00000043008 952 0.883 0.883 - - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
10. Usp40 ENSMUSG00000005501 1265 0.883 0.883 - - - - - ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
11. Polg2 ENSMUSG00000020718 273 0.881 0.881 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
12. St8sia2 ENSMUSG00000025789 3710 0.879 0.879 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:106020]
13. Shprh ENSMUSG00000090112 1191 0.878 0.878 - - - - - SNF2 histone linker PHD RING helicase [Source:MGI Symbol;Acc:MGI:1917581]
14. Gtf3c3 ENSMUSG00000041303 471 0.876 0.876 - - - - - general transcription factor IIIC, polypeptide 3 [Source:MGI Symbol;Acc:MGI:2138383]
15. Asap3 ENSMUSG00000036995 98 0.876 0.876 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:MGI Symbol;Acc:MGI:2684986]
16. Zfp13 ENSMUSG00000062012 261 0.875 0.875 - - - - - zinc finger protein 13 [Source:MGI Symbol;Acc:MGI:99159]
17. Tnip1 ENSMUSG00000020400 414 0.875 0.875 - - - - - TNFAIP3 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926194]
18. Slc4a4 ENSMUSG00000060961 235 0.875 0.875 - - - - - solute carrier family 4 (anion exchanger), member 4 [Source:MGI Symbol;Acc:MGI:1927555]
19. Pdia5 ENSMUSG00000022844 1610 0.874 0.874 - - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
20. Tmem161b ENSMUSG00000035762 229 0.873 0.873 - - - - - transmembrane protein 161B [Source:MGI Symbol;Acc:MGI:1919995]
21. Pycrl ENSMUSG00000022571 5650 0.873 0.873 - - - - - pyrroline-5-carboxylate reductase-like [Source:MGI Symbol;Acc:MGI:1913444]
22. Cep152 ENSMUSG00000068394 643 0.873 0.873 - - - - - centrosomal protein 152 [Source:MGI Symbol;Acc:MGI:2139083]
23. Cdk6 ENSMUSG00000040274 355 0.873 0.873 - - - - - cyclin-dependent kinase 6 [Source:MGI Symbol;Acc:MGI:1277162]
24. Pdik1l ENSMUSG00000050890 697 0.872 0.872 - - - - - PDLIM1 interacting kinase 1 like [Source:MGI Symbol;Acc:MGI:2385213]
25. Gm24854 ENSMUSG00000088650 314 0.872 0.872 - - - - - predicted gene, 24854 [Source:MGI Symbol;Acc:MGI:5454631]
26. Tango2 ENSMUSG00000013539, ENSMUSG00000098377 1209 0.871 0.871 - - - - - transport and golgi organization 2 [Source:MGI Symbol;Acc:MGI:101825]
27. Calu ENSMUSG00000029767 4381 0.871 0.871 - - - - - calumenin [Source:MGI Symbol;Acc:MGI:1097158]
28. Ogg1 ENSMUSG00000030271 242 0.871 0.871 - - - - - 8-oxoguanine DNA-glycosylase 1 [Source:MGI Symbol;Acc:MGI:1097693]
29. E430025E21Rik 3136 0.87 0.870 - - - - - RIKEN cDNA E430025E21 gene, transcript variant X1
30. Slc39a9 ENSMUSG00000048833 2916 0.87 0.870 - - - - - solute carrier family 39 (zinc transporter), member 9 [Source:MGI Symbol;Acc:MGI:1914820]
31. Lmln ENSMUSG00000022802 160 0.87 0.870 - - - - - leishmanolysin-like (metallopeptidase M8 family) [Source:MGI Symbol;Acc:MGI:2444736]
32. Gm15051 Gm15051 144 0.87 0.870 - - - - -
33. Epn2 ENSMUSG00000001036 1070 0.87 0.870 - - - - - epsin 2 [Source:MGI Symbol;Acc:MGI:1333766]
34. Coprs ENSMUSG00000031458 1554 0.87 0.870 - - - - - coordinator of PRMT5, differentiation stimulator [Source:MGI Symbol;Acc:MGI:1913673]
35. Cradd ENSMUSG00000045867 347 0.869 0.869 - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
36. Slc27a6 ENSMUSG00000024600 60 0.869 0.869 - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:MGI Symbol;Acc:MGI:3036230]
37. Tceal6 ENSMUSG00000031409 119 0.869 0.869 - - - - - transcription elongation factor A (SII)-like 6 [Source:MGI Symbol;Acc:MGI:1923939]
38. Gm27010 ENSMUSG00000098183 452 0.868 0.868 - - - - - predicted gene, 27010 [Source:MGI Symbol;Acc:MGI:5504125]
39. Cntrob ENSMUSG00000032782 747 0.868 0.868 - - - - - centrobin, centrosomal BRCA2 interacting protein [Source:MGI Symbol;Acc:MGI:2443290]
40. Gtpbp10 ENSMUSG00000040464 1042 0.868 0.868 - - - - - GTP-binding protein 10 (putative) [Source:MGI Symbol;Acc:MGI:2385599]
41. 4930432K21Rik ENSMUSG00000008129 59 0.868 0.868 - - - - - RIKEN cDNA 4930432K21 gene [Source:MGI Symbol;Acc:MGI:1921916]
42. Abhd14b ENSMUSG00000042073 300 0.867 0.867 - - - - - abhydrolase domain containing 14b [Source:MGI Symbol;Acc:MGI:1923741]
43. Extl2 ENSMUSG00000027963 931 0.867 0.867 - - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
44. Sepn1 1707 0.867 0.867 - - - - - selenoprotein N, 1
45. Ddx25 ENSMUSG00000032101 555 0.867 0.867 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Source:MGI Symbol;Acc:MGI:1353582]
46. Gm12088 ENSMUSG00000086707 296 0.866 0.866 - - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
47. Gm14760 ENSMUSG00000081221 37 0.866 0.866 - - - - - predicted gene 14760 [Source:MGI Symbol;Acc:MGI:3709612]
48. Angptl4 ENSMUSG00000002289 525 0.865 0.865 - - - - - angiopoietin-like 4 [Source:MGI Symbol;Acc:MGI:1888999]
49. Gm11217 ENSMUSG00000085032 29 0.865 0.865 - - - - - predicted gene 11217 [Source:MGI Symbol;Acc:MGI:3651042]
50. Pnpla2 ENSMUSG00000025509 905 0.865 0.865 - - - - - patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
51. Gm15696 ENSMUSG00000083853 35 0.865 0.865 - - - - - predicted gene 15696 [Source:MGI Symbol;Acc:MGI:3783137]
52. Htra2 ENSMUSG00000068329 44 0.865 0.865 - - - - - HtrA serine peptidase 2 [Source:MGI Symbol;Acc:MGI:1928676]
53. Camkv ENSMUSG00000032936 71 0.865 0.865 - - - - - CaM kinase-like vesicle-associated [Source:MGI Symbol;Acc:MGI:2384296]
54. RP24-289J12.1 RP24-289J12.1 254 0.864 0.864 - - - - -
55. Zfp354b ENSMUSG00000020335 56 0.864 0.864 - - - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
56. BC039771 291 0.863 0.863 - - - - - cDNA sequence BC039771
57. Ptma-ps1 ENSMUSG00000095331 29 0.863 0.863 - - - - - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
58. Gm12029 ENSMUSG00000081820 26 0.863 0.863 - - - - - predicted gene 12029 [Source:MGI Symbol;Acc:MGI:3651192]
59. Polh ENSMUSG00000023953 65 0.863 0.863 - - - - - polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
60. Ccdc146 ENSMUSG00000064280 65 0.863 0.863 - - - - - coiled-coil domain containing 146 [Source:MGI Symbol;Acc:MGI:1922422]
61. Scrg1 ENSMUSG00000031610 40 0.863 0.863 - - - - - scrapie responsive gene 1 [Source:MGI Symbol;Acc:MGI:1328308]
62. Bicd2 ENSMUSG00000037933 784 0.862 0.862 - - - - - BICD cargo adaptor 2 [Source:MGI Symbol;Acc:MGI:1924145]
63. Vps8 ENSMUSG00000033653 284 0.862 0.862 - - - - - VPS8 CORVET complex subunit [Source:MGI Symbol;Acc:MGI:2146407]
64. Tbc1d19 ENSMUSG00000039178 1119 0.862 0.862 - - - - - TBC1 domain family, member 19 [Source:MGI Symbol;Acc:MGI:1914499]
65. Trip4 ENSMUSG00000032386 1218 0.861 0.861 - - - - - thyroid hormone receptor interactor 4 [Source:MGI Symbol;Acc:MGI:1928469]
66. Hist1h4k ENSMUSG00000064288 71 0.861 0.861 - - - - - histone cluster 1, H4k [Source:MGI Symbol;Acc:MGI:2448439]
67. Snx21 ENSMUSG00000050373 473 0.861 0.861 - - - - - sorting nexin family member 21 [Source:MGI Symbol;Acc:MGI:1917729]
68. Mtfp1 ENSMUSG00000004748 496 0.861 0.861 - - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
69. Gm15703 ENSMUSG00000083890 47 0.86 0.860 - - - - - predicted gene 15703 [Source:MGI Symbol;Acc:MGI:3783143]
70. Fahd2a ENSMUSG00000027371 222 0.859 0.859 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
71. Mgat4a ENSMUSG00000026110 296 0.859 0.859 - - - - - mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
72. Lipg ENSMUSG00000053846 221 0.859 0.859 - - - - - lipase, endothelial [Source:MGI Symbol;Acc:MGI:1341803]
73. Kirrel ENSMUSG00000041734 243 0.858 0.858 - - - - - kirre like nephrin family adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1891396]
74. Upf3a ENSMUSG00000038398 402 0.858 0.858 - - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
75. Ap3d1 ENSMUSG00000020198 2925 0.858 0.858 - - - - - adaptor-related protein complex 3, delta 1 subunit [Source:MGI Symbol;Acc:MGI:107734]
76. Ppwd1 ENSMUSG00000021713 772 0.857 0.857 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:MGI Symbol;Acc:MGI:2443069]
77. Nr2c2ap ENSMUSG00000071078 241 0.857 0.857 - - - - - nuclear receptor 2C2-associated protein [Source:MGI Symbol;Acc:MGI:1922942]
78. 2900053O20Rik 2900053O20Rik 125 0.857 0.857 - - - - -
79. Uxs1 ENSMUSG00000057363 565 0.856 0.856 - - - - - UDP-glucuronate decarboxylase 1 [Source:MGI Symbol;Acc:MGI:1915133]
80. 1700049G17Rik 282 0.855 0.855 - - - - - RIKEN cDNA 1700049G17 gene
81. Tsen2 ENSMUSG00000042389 639 0.855 0.855 - - - - - tRNA splicing endonuclease subunit 2 [Source:MGI Symbol;Acc:MGI:2141599]
82. Slc38a9 ENSMUSG00000047789 646 0.854 0.854 - - - - - solute carrier family 38, member 9 [Source:MGI Symbol;Acc:MGI:1918839]
83. Nit1 ENSMUSG00000013997 660 0.854 0.854 - - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
84. Slc20a1 ENSMUSG00000027397 2888 0.853 0.853 - - - - - solute carrier family 20, member 1 [Source:MGI Symbol;Acc:MGI:108392]
85. She ENSMUSG00000046280 1769 0.853 0.853 - - - - - src homology 2 domain-containing transforming protein E [Source:MGI Symbol;Acc:MGI:1099462]
86. Uaca ENSMUSG00000034485 405 0.853 0.853 - - - - - uveal autoantigen with coiled-coil domains and ankyrin repeats [Source:MGI Symbol;Acc:MGI:1919815]
87. Tfb2m ENSMUSG00000026492 253 0.852 0.852 - - - - - transcription factor B2, mitochondrial [Source:MGI Symbol;Acc:MGI:107937]
88. Zfp790 ENSMUSG00000011427 657 0.852 0.852 - - - - - zinc finger protein 790 [Source:MGI Symbol;Acc:MGI:1923431]
89. Gm20492 ENSMUSG00000092593 105 0.851 0.851 - - - - - predicted gene 20492 [Source:MGI Symbol;Acc:MGI:5141957]
90. Gm2531 ENSMUSG00000058567 236 0.85 0.850 - - - - - predicted gene 2531 [Source:MGI Symbol;Acc:MGI:3780699]
91. Actr1b ENSMUSG00000037351 941 0.85 0.850 - - - - - ARP1 actin-related protein 1B, centractin beta [Source:MGI Symbol;Acc:MGI:1917446]
92. Gm16973 ENSMUSG00000097743 731 0.849 0.849 - - - - - predicted gene, 16973 [Source:MGI Symbol;Acc:MGI:4439897]
93. Zfp219 ENSMUSG00000049295 199 0.849 0.849 - - - - - zinc finger protein 219 [Source:MGI Symbol;Acc:MGI:1917140]
94. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 0.848 0.848 - - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
95. Ptplad2 Ptplad2 382 0.848 - - 0.848 - - -
96. Dera ENSMUSG00000030225 1240 0.847 0.847 - - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
97. Fpgs ENSMUSG00000009566 605 0.847 0.847 - - - - - folylpolyglutamyl synthetase [Source:MGI Symbol;Acc:MGI:95576]
98. Ubash3b ENSMUSG00000032020 698 0.846 0.846 - - - - - ubiquitin associated and SH3 domain containing, B [Source:MGI Symbol;Acc:MGI:1920078]
99. Slc36a1 ENSMUSG00000020261 270 0.846 0.846 - - - - - solute carrier family 36 (proton/amino acid symporter), member 1 [Source:MGI Symbol;Acc:MGI:2445299]
100. Trim3 ENSMUSG00000036989 619 0.846 0.846 - - - - - tripartite motif-containing 3 [Source:MGI Symbol;Acc:MGI:1860040]

There are 360 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA