Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vps39

Gene Name Gene ID Reads Annotation
Vps39 ENSMUSG00000027291 798 VPS39 HOPS complex subunit [Source:MGI Symbol;Acc:MGI:2443189]







Genes with expression patterns similar to Vps39

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vps39 ENSMUSG00000027291 798 6 1.000 1.000 1.000 1.000 1.000 1.000 VPS39 HOPS complex subunit [Source:MGI Symbol;Acc:MGI:2443189]
2. Rps6ka5 ENSMUSG00000021180 94 0.849 - 0.849 - - - - ribosomal protein S6 kinase, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1920336]
3. Slc40a1 ENSMUSG00000025993 484 0.846 - 0.846 - - - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
4. 3830403N18Rik ENSMUSG00000031125 31 0.846 - 0.846 - - - - RIKEN cDNA 3830403N18 gene [Source:MGI Symbol;Acc:MGI:1917941]
5. Negr1 ENSMUSG00000040037 312 0.845 - 0.845 - - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
6. Slc15a2 ENSMUSG00000022899 126 0.844 - 0.844 - - - - solute carrier family 15 (H+/peptide transporter), member 2 [Source:MGI Symbol;Acc:MGI:1890457]
7. 5730577I03Rik 5730577I03Rik 79 0.843 - 0.843 - - - -
8. Bmp1 ENSMUSG00000022098 699 0.84 - 0.840 - - - - bone morphogenetic protein 1 [Source:MGI Symbol;Acc:MGI:88176]
9. Glis1 ENSMUSG00000034762 166 0.838 - 0.838 - - - - GLIS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2386723]
10. Pptc7 ENSMUSG00000038582 156 0.837 - 0.837 - - - - PTC7 protein phosphatase homolog [Source:MGI Symbol;Acc:MGI:2444593]
11. Cd82 ENSMUSG00000027215 59 0.835 - 0.835 - - - - CD82 antigen [Source:MGI Symbol;Acc:MGI:104651]
12. Dlx5 ENSMUSG00000029755 23 0.835 - 0.835 - - - - distal-less homeobox 5 [Source:MGI Symbol;Acc:MGI:101926]
13. Gm5741 ENSMUSG00000095845 17 0.835 - 0.835 - - - - predicted gene 5741 [Source:MGI Symbol;Acc:MGI:3645690]
14. Kcnip4 ENSMUSG00000029088 110 0.835 - 0.835 - - - - Kv channel interacting protein 4 [Source:MGI Symbol;Acc:MGI:1933131]
15. Gm17191 ENSMUSG00000091587 14 0.835 - 0.835 - - - - predicted gene 17191 [Source:MGI Symbol;Acc:MGI:4938018]
16. Perp ENSMUSG00000019851 198 0.833 - 0.833 - - - - PERP, TP53 apoptosis effector [Source:MGI Symbol;Acc:MGI:1929938]
17. Gm6768 ENSMUSG00000021908 225 0.833 - 0.833 - - - - predicted gene 6768 [Source:MGI Symbol;Acc:MGI:3648259]
18. Fcrls ENSMUSG00000015852 76 0.832 - 0.832 - - - - Fc receptor-like S, scavenger receptor [Source:MGI Symbol;Acc:MGI:1933397]
19. Gm7308 ENSMUSG00000081113 54 0.832 - 0.832 - - - - predicted pseudogene 7308 [Source:MGI Symbol;Acc:MGI:3644558]
20. Atp10d ENSMUSG00000046808 78 0.832 - 0.832 - - - - ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
21. Wdr78 ENSMUSG00000035126 268 0.831 - 0.831 - - - - WD repeat domain 78 [Source:MGI Symbol;Acc:MGI:2385328]
22. Mgat5b ENSMUSG00000043857 152 0.83 - 0.830 - - - - mannoside acetylglucosaminyltransferase 5, isoenzyme B [Source:MGI Symbol;Acc:MGI:3606200]
23. 2700016F22Rik ENSMUSG00000097731 59 0.829 - 0.829 - - - - RIKEN cDNA 2700016F22 gene [Source:MGI Symbol;Acc:MGI:1919807]
24. Gm5532 ENSMUSG00000073535 47 0.829 - 0.829 - - - - predicted gene 5532 [Source:MGI Symbol;Acc:MGI:3646828]
25. Urod ENSMUSG00000028684 1096 0.828 - 0.828 - - - - uroporphyrinogen decarboxylase [Source:MGI Symbol;Acc:MGI:98916]
26. S100a1 ENSMUSG00000044080 348 0.827 - 0.827 - - - - S100 calcium binding protein A1 [Source:MGI Symbol;Acc:MGI:1338917]
27. Filip1l ENSMUSG00000043336 937 0.827 - 0.827 - - - - filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
28. Gm20663 ENSMUSG00000093378 49 0.826 - 0.826 - - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
29. Gata2 ENSMUSG00000015053 838 0.825 - 0.825 - - - - GATA binding protein 2 [Source:MGI Symbol;Acc:MGI:95662]
30. Slc46a3 ENSMUSG00000029650 39 0.825 - 0.825 - - - - solute carrier family 46, member 3 [Source:MGI Symbol;Acc:MGI:1918956]
31. Glb1l ENSMUSG00000026200 115 0.825 - 0.825 - - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
32. Slc38a7 ENSMUSG00000036534 269 0.824 - 0.824 - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
33. Fgd3 ENSMUSG00000037946 123 0.824 - 0.824 - - - - FYVE, RhoGEF and PH domain containing 3 [Source:MGI Symbol;Acc:MGI:1353657]
34. Micu3 ENSMUSG00000039478 705 0.823 - 0.823 - - - - mitochondrial calcium uptake family, member 3 [Source:MGI Symbol;Acc:MGI:1925756]
35. Gm16973 ENSMUSG00000097743 731 0.823 - 0.823 - - - - predicted gene, 16973 [Source:MGI Symbol;Acc:MGI:4439897]
36. Dok5 ENSMUSG00000027560 231 0.823 - 0.823 - - - - docking protein 5 [Source:MGI Symbol;Acc:MGI:1924079]
37. Ginm1 ENSMUSG00000040006, ENSMUSG00000115999 540 0.818 - 0.818 - - - - glycoprotein integral membrane 1 [Source:MGI Symbol;Acc:MGI:2384905]
38. Fads6 ENSMUSG00000044788 88 0.816 - 0.816 - - - - fatty acid desaturase domain family, member 6 [Source:MGI Symbol;Acc:MGI:3039592]
39. Lrrc32 ENSMUSG00000090958 175 0.815 - 0.815 - - - - leucine rich repeat containing 32 [Source:MGI Symbol;Acc:MGI:93882]
40. Angptl4 ENSMUSG00000002289 525 0.814 - 0.814 - - - - angiopoietin-like 4 [Source:MGI Symbol;Acc:MGI:1888999]
41. Trappc4 ENSMUSG00000032112 4562 0.813 - 0.813 - - - - trafficking protein particle complex 4 [Source:MGI Symbol;Acc:MGI:1926211]
42. 4731419I09Rik ENSMUSG00000097004 89 0.812 - 0.812 - - - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
43. Krt7 ENSMUSG00000023039 391 0.81 - 0.810 - - - - keratin 7 [Source:MGI Symbol;Acc:MGI:96704]
44. Pkp3 ENSMUSG00000054065 110 0.81 - 0.810 - - - - plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
45. Lactb ENSMUSG00000032370 504 0.81 - - 0.810 - - - lactamase, beta [Source:MGI Symbol;Acc:MGI:1933395]
46. Ndor1 ENSMUSG00000006471, ENSMUSG00000115074 502 0.81 - 0.810 - - - - NADPH dependent diflavin oxidoreductase 1 [Source:MGI Symbol;Acc:MGI:1926047]
47. Cox16 ENSMUSG00000091803 212 0.809 - 0.809 - - - - cytochrome c oxidase assembly protein 16 [Source:MGI Symbol;Acc:MGI:1913522]
48. Xkr8 ENSMUSG00000037752 188 0.809 - 0.809 - - - - X-linked Kx blood group related 8 [Source:MGI Symbol;Acc:MGI:2685877]
49. Ly96 ENSMUSG00000025779 116 0.808 - 0.808 - - - - lymphocyte antigen 96 [Source:MGI Symbol;Acc:MGI:1341909]
50. Simc1 ENSMUSG00000043183 1054 0.807 - 0.807 - - - - SUMO-interacting motifs containing 1 [Source:MGI Symbol;Acc:MGI:2442599]
51. Gm19705 ENSMUSG00000097113 65 0.807 - 0.807 - - - - predicted gene, 19705 [Source:MGI Symbol;Acc:MGI:5011890]
52. Gm20538 ENSMUSG00000091471 138 0.806 - 0.806 - - - - predicted gene 20538 [Source:MGI Symbol;Acc:MGI:5142003]
53. Satb2 ENSMUSG00000038331 158 0.806 - 0.806 - - - - special AT-rich sequence binding protein 2 [Source:MGI Symbol;Acc:MGI:2679336]
54. Gm4117 ENSMUSG00000089940 1066 0.805 - 0.805 - - - - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
55. Ppp1r3f ENSMUSG00000039556 238 0.804 - 0.804 - - - - protein phosphatase 1, regulatory subunit 3F [Source:MGI Symbol;Acc:MGI:1859617]
56. Gm14567 ENSMUSG00000080896 310 0.803 - 0.803 - - - - predicted gene 14567 [Source:MGI Symbol;Acc:MGI:3705732]
57. Bves ENSMUSG00000071317 201 0.802 - 0.802 - - - - blood vessel epicardial substance [Source:MGI Symbol;Acc:MGI:1346013]
58. Blm ENSMUSG00000030528 1075 0.802 - 0.802 - - - - Bloom syndrome, RecQ like helicase [Source:MGI Symbol;Acc:MGI:1328362]
59. Loh12cr1 Loh12cr1 321 0.8 - 0.800 - - - -
60. Glb1l2 ENSMUSG00000036395 169 0.799 - 0.799 - - - - galactosidase, beta 1-like 2 [Source:MGI Symbol;Acc:MGI:2388283]
61. Sag ENSMUSG00000056055 914 0.798 - 0.798 - - - - S-antigen, retina and pineal gland (arrestin) [Source:MGI Symbol;Acc:MGI:98227]
62. Gngt2 ENSMUSG00000038811 176 0.797 - 0.797 - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 [Source:MGI Symbol;Acc:MGI:893584]
63. Abcc4 ENSMUSG00000032849 253 0.797 - 0.797 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:MGI Symbol;Acc:MGI:2443111]
64. 1110007C09Rik 1110007C09Rik 446 0.796 - 0.796 - - - -
65. Mier2 ENSMUSG00000042570 1463 0.796 - 0.796 - - - - MIER family member 2 [Source:MGI Symbol;Acc:MGI:1917677]
66. Lats2 ENSMUSG00000021959 2203 0.796 - 0.796 - - - - large tumor suppressor 2 [Source:MGI Symbol;Acc:MGI:1354386]
67. Ubxn8 ENSMUSG00000052906 461 0.795 - 0.795 - - - - UBX domain protein 8 [Source:MGI Symbol;Acc:MGI:1337129]
68. Gm16938 ENSMUSG00000097749 62 0.794 - 0.794 - - - - predicted gene, 16938 [Source:MGI Symbol;Acc:MGI:4439862]
69. Trim6 ENSMUSG00000072244 167 0.794 - 0.794 - - - - tripartite motif-containing 6 [Source:MGI Symbol;Acc:MGI:2137352]
70. Stxbp5 ENSMUSG00000019790 377 0.793 - 0.793 - - - - syntaxin binding protein 5 (tomosyn) [Source:MGI Symbol;Acc:MGI:1926058]
71. Tnni2 ENSMUSG00000031097 62 0.793 - 0.793 - - - - troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
72. Eif5a2 ENSMUSG00000050192 1287 0.792 - 0.792 - - - - eukaryotic translation initiation factor 5A2 [Source:MGI Symbol;Acc:MGI:1933735]
73. Stk36 ENSMUSG00000033276 310 0.791 - 0.791 - - - - serine/threonine kinase 36 [Source:MGI Symbol;Acc:MGI:1920831]
74. Mmp11 ENSMUSG00000000901 695 0.791 - 0.791 - - - - matrix metallopeptidase 11 [Source:MGI Symbol;Acc:MGI:97008]
75. Gm22813 ENSMUSG00000105450, ENSMUSG00000105886 91 0.791 - 0.791 - - - - predicted gene, 22813 [Source:MGI Symbol;Acc:MGI:5452590]
76. Lypd6 ENSMUSG00000050447 283 0.791 - 0.791 - - - - LY6/PLAUR domain containing 6 [Source:MGI Symbol;Acc:MGI:2443848]
77. Papd5 ENSMUSG00000036779 1511 0.79 - 0.790 - - - - PAP associated domain containing 5 [Source:MGI Symbol;Acc:MGI:1917820]
78. Athl1 572 0.79 - 0.790 - - - - ATH1, acid trehalase-like 1 (yeast), transcript variant X6
79. Arel1 ENSMUSG00000042350 184 0.787 - 0.787 - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1915747]
80. Mtx2 ENSMUSG00000027099 3111 0.787 - 0.787 - - - - metaxin 2 [Source:MGI Symbol;Acc:MGI:1859652]
81. Esyt2 ENSMUSG00000021171 725 0.786 - 0.786 - - - - extended synaptotagmin-like protein 2 [Source:MGI Symbol;Acc:MGI:1261845]
82. Nek1 ENSMUSG00000031644 533 0.786 - 0.786 - - - - NIMA (never in mitosis gene a)-related expressed kinase 1 [Source:MGI Symbol;Acc:MGI:97303]
83. Bax ENSMUSG00000003873 486 0.783 - 0.783 - - - - BCL2-associated X protein [Source:MGI Symbol;Acc:MGI:99702]
84. Rps23 ENSMUSG00000049517 555 0.783 - 0.783 - - - - ribosomal protein S23 [Source:MGI Symbol;Acc:MGI:1913725]
85. Zfp184 ENSMUSG00000006720 491 0.783 - 0.783 - - - - zinc finger protein 184 (Kruppel-like) [Source:MGI Symbol;Acc:MGI:1922244]
86. Txnrd2 ENSMUSG00000075704, ENSMUSG00000099282 206 0.782 - - 0.782 - - - thioredoxin reductase 2 [Source:MGI Symbol;Acc:MGI:1347023]
87. Wrn ENSMUSG00000031583 412 0.781 - 0.781 - - - - Werner syndrome RecQ like helicase [Source:MGI Symbol;Acc:MGI:109635]
88. Carm1 ENSMUSG00000032185 70 0.781 - 0.781 - - - - coactivator-associated arginine methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913208]
89. Malsu1 ENSMUSG00000029815 1252 0.781 - 0.781 - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:MGI Symbol;Acc:MGI:1922843]
90. Rad51d ENSMUSG00000018841 325 0.78 - 0.780 - - - - RAD51 paralog D [Source:MGI Symbol;Acc:MGI:1261809]
91. Nrros ENSMUSG00000052384 234 0.779 - 0.779 - - - - negative regulator of reactive oxygen species [Source:MGI Symbol;Acc:MGI:2445095]
92. Parpbp ENSMUSG00000035365 505 0.778 - 0.778 - - - - PARP1 binding protein [Source:MGI Symbol;Acc:MGI:1922567]
93. Wdr86 ENSMUSG00000055235 1076 0.777 - 0.777 - - - - WD repeat domain 86 [Source:MGI Symbol;Acc:MGI:1915466]
94. Pard6b ENSMUSG00000044641 535 0.776 - 0.776 - - - - par-6 family cell polarity regulator beta [Source:MGI Symbol;Acc:MGI:2135605]
95. Exoc1 ENSMUSG00000036435 1146 0.775 - 0.775 - - - - exocyst complex component 1 [Source:MGI Symbol;Acc:MGI:2445020]
96. Egr1 ENSMUSG00000038418 99 0.775 - - 0.775 - - - early growth response 1 [Source:MGI Symbol;Acc:MGI:95295]
97. Slc1a4 ENSMUSG00000020142 680 0.775 - 0.775 - - - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:2135601]
98. Spryd3 ENSMUSG00000036966 385 0.775 - 0.775 - - - - SPRY domain containing 3 [Source:MGI Symbol;Acc:MGI:2446175]
99. Dpf1 ENSMUSG00000030584 466 0.774 - 0.774 - - - - D4, zinc and double PHD fingers family 1 [Source:MGI Symbol;Acc:MGI:1352748]
100. Elac2 ENSMUSG00000020549 799 0.773 - 0.773 - - - - elaC ribonuclease Z 2 [Source:MGI Symbol;Acc:MGI:1890496]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA