Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vps13a

Gene Name Gene ID Reads Annotation
Vps13a ENSMUSG00000046230 239 vacuolar protein sorting 13A [Source:MGI Symbol;Acc:MGI:2444304]







Genes with expression patterns similar to Vps13a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vps13a ENSMUSG00000046230 239 6 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 13A [Source:MGI Symbol;Acc:MGI:2444304]
2. Rnu3a ENSMUSG00000065870, ENSMUSG00000106147 89 1.559 - 0.808 0.751 - - - U3A small nuclear RNA [Source:MGI Symbol;Acc:MGI:97977]
3. Prrt4 ENSMUSG00000079654 149 1.477 - 0.772 - - - 0.705 proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
4. Hopx ENSMUSG00000059325 75 1.461 - - 0.735 - - 0.726 HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
5. Iqca ENSMUSG00000026301 12 0.879 - - 0.879 - - - IQ motif containing with AAA domain [Source:MGI Symbol;Acc:MGI:1922168]
6. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.87 - - 0.870 - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
7. Fbxl21 ENSMUSG00000035509 58 0.865 - 0.865 - - - - F-box and leucine-rich repeat protein 21 [Source:MGI Symbol;Acc:MGI:2442921]
8. Cabp5 ENSMUSG00000005649 14 0.846 - 0.846 - - - - calcium binding protein 5 [Source:MGI Symbol;Acc:MGI:1352746]
9. Slc13a5 ENSMUSG00000020805 6 0.842 - 0.842 - - - - solute carrier family 13 (sodium-dependent citrate transporter), member 5 [Source:MGI Symbol;Acc:MGI:3037150]
10. Ltb4r2 ENSMUSG00000040432 6 0.842 - 0.842 - - - - leukotriene B4 receptor 2 [Source:MGI Symbol;Acc:MGI:1888501]
11. Clca2 ENSMUSG00000036960 6 0.842 - 0.842 - - - - chloride channel accessory 2 [Source:MGI Symbol;Acc:MGI:2139758]
12. Gm9703 ENSMUSG00000082741 6 0.842 - 0.842 - - - - predicted gene 9703 [Source:MGI Symbol;Acc:MGI:3780110]
13. C130050O18Rik ENSMUSG00000044092 7 0.842 - 0.842 - - - - RIKEN cDNA C130050O18 gene [Source:MGI Symbol;Acc:MGI:2442694]
14. Pstpip2 ENSMUSG00000025429, ENSMUSG00000116035 7 0.842 - 0.842 - - - - proline-serine-threonine phosphatase-interacting protein 2 [Source:MGI Symbol;Acc:MGI:1335088]
15. Rps13-ps2 ENSMUSG00000069972 13 0.842 - 0.842 - - - - ribosomal protein S13, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3704295]
16. Gfi1b ENSMUSG00000026815 88 0.841 - 0.841 - - - - growth factor independent 1B [Source:MGI Symbol;Acc:MGI:1276578]
17. RP23-386C10.2 RP23-386C10.2 51 0.84 - 0.840 - - - -
18. Lrrc2 ENSMUSG00000032495 179 0.839 - - 0.839 - - - leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]
19. Tbxas1 ENSMUSG00000029925 57 0.838 - 0.838 - - - - thromboxane A synthase 1, platelet [Source:MGI Symbol;Acc:MGI:98497]
20. Zscan25 ENSMUSG00000070420 12 0.837 - 0.837 - - - - zinc finger and SCAN domain containing 25 [Source:MGI Symbol;Acc:MGI:3647079]
21. 4921514A10Rik ENSMUSG00000097620 20 0.836 - 0.836 - - - - RIKEN cDNA 4921514A10 gene [Source:MGI Symbol;Acc:MGI:3704238]
22. Zfp42 ENSMUSG00000051176 11 0.836 - 0.836 - - - - zinc finger protein 42 [Source:MGI Symbol;Acc:MGI:99187]
23. Gm10644 ENSMUSG00000074219 28 0.834 - 0.834 - - - - predicted gene 10644 [Source:MGI Symbol;Acc:MGI:3704314]
24. AY512931 ENSMUSG00000066158 48 0.831 - 0.831 - - - - cDNA sequence AY512931 [Source:MGI Symbol;Acc:MGI:3525069]
25. Sema3e ENSMUSG00000063531 67 0.827 - 0.827 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:MGI Symbol;Acc:MGI:1340034]
26. 4933421A08Rik ENSMUSG00000086443 26 0.825 - 0.825 - - - - RIKEN cDNA 4933421A08 gene [Source:MGI Symbol;Acc:MGI:1918347]
27. Nebl ENSMUSG00000053702 141 0.825 - 0.825 - - - - nebulette [Source:MGI Symbol;Acc:MGI:1921353]
28. Gm6023 ENSMUSG00000081159 42 0.824 - 0.824 - - - - predicted gene 6023 [Source:MGI Symbol;Acc:MGI:3645815]
29. Pibf1 ENSMUSG00000022064 297 0.822 - - - - - 0.822 progesterone immunomodulatory binding factor 1 [Source:MGI Symbol;Acc:MGI:1261910]
30. Gm11131 ENSMUSG00000079505 32 0.822 - 0.822 - - - - predicted gene 11131 [Source:MGI Symbol;Acc:MGI:3779386]
31. Ahnak2 ENSMUSG00000072812 14 0.82 - 0.820 - - - - AHNAK nucleoprotein 2 [Source:MGI Symbol;Acc:MGI:2144831]
32. Lilrb4 Lilrb4 13 0.82 - 0.820 - - - -
33. Susd1 ENSMUSG00000038578 51 0.819 - 0.819 - - - - sushi domain containing 1 [Source:MGI Symbol;Acc:MGI:3651543]
34. A130006I12Rik ENSMUSG00000069136 6 0.818 - 0.818 - - - - RIKEN cDNA A130006I12 gene [Source:MGI Symbol;Acc:MGI:2441774]
35. Esm1 ENSMUSG00000042379 29 0.817 - 0.817 - - - - endothelial cell-specific molecule 1 [Source:MGI Symbol;Acc:MGI:1918940]
36. Abca5 ENSMUSG00000018800 112 0.816 - 0.816 - - - - ATP-binding cassette, sub-family A (ABC1), member 5 [Source:MGI Symbol;Acc:MGI:2386607]
37. RP24-288C12.6 RP24-288C12.6 17 0.808 - 0.808 - - - -
38. Gm16292 Gm16292 40 0.805 - 0.805 - - - -
39. Rps12-ps19 ENSMUSG00000082481 30 0.803 - 0.803 - - - - ribosomal protein S12, pseudogene 19 [Source:MGI Symbol;Acc:MGI:3652063]
40. Xrn1 ENSMUSG00000032410 667 0.802 - - 0.802 - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
41. Hmx2 ENSMUSG00000050100 31 0.801 - - 0.801 - - - H6 homeobox 2 [Source:MGI Symbol;Acc:MGI:107159]
42. Ptgfr ENSMUSG00000028036 25 0.801 - 0.801 - - - - prostaglandin F receptor [Source:MGI Symbol;Acc:MGI:97796]
43. Plac1 ENSMUSG00000061082 138 0.801 - - 0.801 - - - placental specific protein 1 [Source:MGI Symbol;Acc:MGI:1926287]
44. Gpam ENSMUSG00000024978 18 0.8 - - - - - 0.800 glycerol-3-phosphate acyltransferase, mitochondrial [Source:MGI Symbol;Acc:MGI:109162]
45. Gm11824 ENSMUSG00000082128 50 0.799 - 0.799 - - - - predicted gene 11824 [Source:MGI Symbol;Acc:MGI:3651313]
46. Stk33 ENSMUSG00000031027 43 0.797 - 0.797 - - - - serine/threonine kinase 33 [Source:MGI Symbol;Acc:MGI:2152419]
47. C1qtnf1 ENSMUSG00000017446 57 0.796 - 0.796 - - - - C1q and tumor necrosis factor related protein 1 [Source:MGI Symbol;Acc:MGI:1919254]
48. Fmo1 ENSMUSG00000040181 39 0.795 - - - - - 0.795 flavin containing monooxygenase 1 [Source:MGI Symbol;Acc:MGI:1310002]
49. Agpat9 43 0.795 - 0.795 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, transcript variant X4
50. Itgb2 ENSMUSG00000000290 154 0.793 - 0.793 - - - - integrin beta 2 [Source:MGI Symbol;Acc:MGI:96611]
51. Snord13 ENSMUSG00000088252 27 0.789 - 0.789 - - - - small nucleolar RNA, C/D box 13 [Source:MGI Symbol;Acc:MGI:3819521]
52. Slc15a3 ENSMUSG00000024737 25 0.789 - - - - - 0.789 solute carrier family 15, member 3 [Source:MGI Symbol;Acc:MGI:1929691]
53. Mzb1 ENSMUSG00000024353 12 0.786 - 0.786 - - - - marginal zone B and B1 cell-specific protein 1 [Source:MGI Symbol;Acc:MGI:1917066]
54. Uap1l1 ENSMUSG00000026956 97 0.786 - 0.786 - - - - UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [Source:MGI Symbol;Acc:MGI:2443318]
55. Gm5908 Gm5908 81 0.786 - - - - - 0.786
56. Msr1 ENSMUSG00000025044 18 0.784 - - - - - 0.784 macrophage scavenger receptor 1 [Source:MGI Symbol;Acc:MGI:98257]
57. Foxred2 ENSMUSG00000016552 168 0.784 - - 0.784 - - - FAD-dependent oxidoreductase domain containing 2 [Source:MGI Symbol;Acc:MGI:106315]
58. D17H6S53E ENSMUSG00000043311 168 0.783 - - 0.783 - - - DNA segment, Chr 17, human D6S53E [Source:MGI Symbol;Acc:MGI:90673]
59. Slc37a1 ENSMUSG00000024036 42 0.782 - 0.782 - - - - solute carrier family 37 (glycerol-3-phosphate transporter), member 1 [Source:MGI Symbol;Acc:MGI:2446181]
60. Ascl2 ENSMUSG00000009248 66 0.782 - 0.782 - - - - achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
61. 3110040N11Rik ENSMUSG00000025102 169 0.78 - - 0.780 - - - RIKEN cDNA 3110040N11 gene [Source:MGI Symbol;Acc:MGI:1914540]
62. Ppfia2 ENSMUSG00000053825 97 0.779 - - 0.779 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
63. Zc2hc1c ENSMUSG00000045064 16 0.779 - - - - - 0.779 zinc finger, C2HC-type containing 1C [Source:MGI Symbol;Acc:MGI:1919600]
64. Ctss ENSMUSG00000038642 159 0.779 - 0.779 - - - - cathepsin S [Source:MGI Symbol;Acc:MGI:107341]
65. Gm12341 ENSMUSG00000080763 22 0.779 - 0.779 - - - - predicted gene 12341 [Source:MGI Symbol;Acc:MGI:3650080]
66. Gm24265 ENSMUSG00000096243 20 0.778 - - - - - 0.778 predicted gene, 24265 [Source:MGI Symbol;Acc:MGI:5454042]
67. Gm26640 ENSMUSG00000097569 6 0.778 - - - - - 0.778 predicted gene, 26640 [Source:MGI Symbol;Acc:MGI:5477134]
68. Gm8112 ENSMUSG00000112001 9 0.778 - - - - - 0.778 predicted gene 8112 [Source:MGI Symbol;Acc:MGI:3645531]
69. Gm23722 ENSMUSG00000064936 14 0.778 - - - - - 0.778 predicted gene, 23722 [Source:MGI Symbol;Acc:MGI:5453499]
70. Gm26522 ENSMUSG00000097423 10 0.778 - - - - - 0.778 predicted gene, 26522 [Source:MGI Symbol;Acc:MGI:5477016]
71. Ankrd23 ENSMUSG00000067653 22 0.778 - - - - - 0.778 ankyrin repeat domain 23 [Source:MGI Symbol;Acc:MGI:1925571]
72. Krt15 ENSMUSG00000054146 57 0.776 - 0.776 - - - - keratin 15 [Source:MGI Symbol;Acc:MGI:96689]
73. Gm16279 ENSMUSG00000084998 119 0.776 - - - - - 0.776 predicted gene 16279 [Source:MGI Symbol;Acc:MGI:3826576]
74. Gm10338 ENSMUSG00000094706 5 0.774 - - 0.774 - - - predicted gene 10338 [Source:MGI Symbol;Acc:MGI:3642676]
75. Klf4 ENSMUSG00000003032 309 0.774 - 0.774 - - - - Kruppel-like factor 4 (gut) [Source:MGI Symbol;Acc:MGI:1342287]
76. Spcs2-ps ENSMUSG00000081888 7 0.774 - - 0.774 - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
77. Gm16185 ENSMUSG00000084911 290 0.774 - - 0.774 - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
78. Gm26861 ENSMUSG00000097009 5 0.774 - - 0.774 - - - predicted gene, 26861 [Source:MGI Symbol;Acc:MGI:5477355]
79. Kcna4 ENSMUSG00000042604 14 0.774 - - 0.774 - - - potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
80. Gm16540 ENSMUSG00000090005 7 0.773 - - 0.773 - - - predicted gene 16540 [Source:MGI Symbol;Acc:MGI:4414960]
81. Kif9 ENSMUSG00000032489 32 0.773 - - 0.773 - - - kinesin family member 9 [Source:MGI Symbol;Acc:MGI:1098237]
82. Gm12500 ENSMUSG00000056411 17 0.772 - - - - - 0.772 predicted gene 12500 [Source:MGI Symbol;Acc:MGI:3650304]
83. Evx2 ENSMUSG00000001815 45 0.772 - - 0.772 - - - even-skipped homeobox 2 [Source:MGI Symbol;Acc:MGI:95462]
84. Rasef ENSMUSG00000043003 55 0.772 - - 0.772 - - - RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
85. Chrna7 ENSMUSG00000030525 7 0.772 - - 0.772 - - - cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
86. Efhc2 ENSMUSG00000025038 12 0.771 - - 0.771 - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
87. Fbll1 ENSMUSG00000051062 57 0.771 - - 0.771 - - - fibrillarin-like 1 [Source:MGI Symbol;Acc:MGI:3034689]
88. Vmn1r184 ENSMUSG00000046130 6 0.771 - - - - - 0.771 vomeronasal 1 receptor, 184 [Source:MGI Symbol;Acc:MGI:3852451]
89. Cacng5 ENSMUSG00000040373 32 0.771 - - 0.771 - - - calcium channel, voltage-dependent, gamma subunit 5 [Source:MGI Symbol;Acc:MGI:2157946]
90. 4930512H18Rik ENSMUSG00000086866 25 0.77 - - 0.770 - - - RIKEN cDNA 4930512H18 gene [Source:MGI Symbol;Acc:MGI:1922361]
91. Pld4 ENSMUSG00000052160, ENSMUSG00000116258 44 0.769 - 0.769 - - - - phospholipase D family, member 4 [Source:MGI Symbol;Acc:MGI:2144765]
92. Pou3f4 ENSMUSG00000056854 95 0.769 - - 0.769 - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
93. Hpgd ENSMUSG00000031613 116 0.768 - - 0.768 - - - hydroxyprostaglandin dehydrogenase 15 (NAD) [Source:MGI Symbol;Acc:MGI:108085]
94. Gm14706 ENSMUSG00000083482 26 0.768 - - 0.768 - - - predicted gene 14706 [Source:MGI Symbol;Acc:MGI:3646357]
95. Gm12468 ENSMUSG00000083985 14 0.768 - - 0.768 - - - predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
96. Trim65 ENSMUSG00000054517 56 0.767 - - - - - 0.767 tripartite motif-containing 65 [Source:MGI Symbol;Acc:MGI:2442815]
97. Gm22748 ENSMUSG00000064427 27 0.767 - - 0.767 - - - predicted gene, 22748 [Source:MGI Symbol;Acc:MGI:5452525]
98. Gm2445 ENSMUSG00000098113 16 0.767 - - - - - 0.767 predicted gene 2445 [Source:MGI Symbol;Acc:MGI:3780612]
99. Jak3 ENSMUSG00000031805 103 0.766 - 0.766 - - - - Janus kinase 3 [Source:MGI Symbol;Acc:MGI:99928]
100. 4930523C07Rik ENSMUSG00000090394 21 0.766 - - - - - 0.766 RIKEN cDNA 4930523C07 gene [Source:MGI Symbol;Acc:MGI:1914897]

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA