Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Vcl

Gene Name Gene ID Reads Annotation
Vcl ENSMUSG00000021823 49 vinculin [Source:MGI Symbol;Acc:MGI:98927]







Genes with expression patterns similar to Vcl

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vcl ENSMUSG00000021823 49 5 1.000 1.000 1.000 1.000 - 1.000 vinculin [Source:MGI Symbol;Acc:MGI:98927]
2. Wnt3a ENSMUSG00000009900 70 0.989 - - 0.989 - - - wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
3. Gm11280 ENSMUSG00000085393 24 0.988 - - 0.988 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
4. Gm24611 ENSMUSG00000065206 4 0.988 - - 0.988 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
5. Wnt1 ENSMUSG00000022997 961 0.988 - - 0.988 - - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
6. Atoh1 ENSMUSG00000073043 396 0.988 - - 0.988 - - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
7. Gm16585 ENSMUSG00000089657 13 0.988 - - 0.988 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
8. Ddn ENSMUSG00000059213 51 0.988 - - 0.988 - - - dendrin [Source:MGI Symbol;Acc:MGI:108101]
9. Gm12412 ENSMUSG00000083685 7 0.988 - - 0.988 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
10. Ccr9 ENSMUSG00000029530 12 0.988 - - 0.988 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
11. Gm11615 ENSMUSG00000085083 13 0.987 - - 0.987 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
12. 3100002H09Rik ENSMUSG00000051219 11 0.987 - - 0.987 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
13. Barhl1 ENSMUSG00000026805 447 0.987 - - 0.987 - - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
14. Fbxo2 ENSMUSG00000041556 15 0.986 - - 0.986 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
15. Fn3k ENSMUSG00000025175 18 0.986 - - 0.986 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
16. Ddx43 ENSMUSG00000070291 17 0.986 - - 0.986 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
17. Nlrc4 ENSMUSG00000039193 9 0.986 - - 0.986 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
18. Gm14634 ENSMUSG00000085891 18 0.985 - - 0.985 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
19. Gm973 ENSMUSG00000047361 11 0.984 - - 0.984 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
20. 2310042D19Rik 2310042D19Rik 7 0.984 - - 0.984 - - -
21. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.983 - - 0.983 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
22. Gm24049 ENSMUSG00000076364 20 0.982 - - 0.982 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
23. Tldc1 ENSMUSG00000034105 8 0.98 - - 0.980 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
24. Rgs9 ENSMUSG00000020599 31 0.977 - - 0.977 - - - regulator of G-protein signaling 9 [Source:MGI Symbol;Acc:MGI:1338824]
25. Hectd2 ENSMUSG00000041180 34 0.976 - - 0.976 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2442663]
26. Hist1h2bg ENSMUSG00000058385 62 0.976 - - 0.976 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
27. Pla2g7 ENSMUSG00000023913 28 0.975 - - 0.975 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
28. Kcne4 ENSMUSG00000047330 52 0.975 - - 0.975 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
29. Gm7860 ENSMUSG00000082535 15 0.974 - - 0.974 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
30. Gm15366 ENSMUSG00000080726 11 0.973 - - 0.973 - - - predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
31. Rxfp2 ENSMUSG00000053368 56 0.971 - - 0.971 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
32. Wdr65 Wdr65 40 0.969 - - 0.969 - - -
33. Fam71e1 ENSMUSG00000051113 33 0.967 - - 0.967 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
34. Gm24616 ENSMUSG00000065208 48 0.966 - - 0.966 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
35. Rccd1 ENSMUSG00000038930 21 0.963 - - 0.963 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
36. Gm25635 ENSMUSG00000064609 19 0.962 - - 0.962 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
37. Dennd2d ENSMUSG00000027901 12 0.961 - - 0.961 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
38. Gm26801 ENSMUSG00000097892 60 0.96 - - 0.960 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
39. Cntnap2 ENSMUSG00000039419 230 0.958 - - 0.958 - - - contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]
40. Tmc2 ENSMUSG00000060332 36 0.955 - - 0.955 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
41. Cav2 ENSMUSG00000000058 36 0.955 - - 0.955 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
42. Zfp663 ENSMUSG00000056824 62 0.954 - - 0.954 - - - zinc finger protein 663 [Source:MGI Symbol;Acc:MGI:2685854]
43. 1700030J22Rik ENSMUSG00000031847 46 0.954 - - 0.954 - - - RIKEN cDNA 1700030J22 gene [Source:MGI Symbol;Acc:MGI:1916778]
44. Sep-01 Sep-01 32 0.953 - - 0.953 - - -
45. Wnt9a ENSMUSG00000000126 90 0.951 - - 0.951 - - - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
46. Gm24316 ENSMUSG00000096731 75 0.948 - - 0.948 - - - predicted gene, 24316 [Source:MGI Symbol;Acc:MGI:5454093]
47. Rpsa-ps9 ENSMUSG00000082895 35 0.947 - - 0.947 - - - ribosomal protein SA, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3650393]
48. Gm27032 ENSMUSG00000098051 80 0.945 - - 0.945 - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
49. Hist1h3b ENSMUSG00000069267 24 0.944 - - 0.944 - - - histone cluster 1, H3b [Source:MGI Symbol;Acc:MGI:2448319]
50. Gm16701 ENSMUSG00000097823, ENSMUSG00000102548 29 0.943 - - 0.943 - - - predicted gene, 16701 [Source:MGI Symbol;Acc:MGI:4439625]
51. Gm5555 ENSMUSG00000083477 39 0.94 - - 0.940 - - - predicted pseudogene 5555 [Source:MGI Symbol;Acc:MGI:3648970]
52. Dync1i1 ENSMUSG00000029757 144 0.938 - - 0.938 - - - dynein cytoplasmic 1 intermediate chain 1 [Source:MGI Symbol;Acc:MGI:107743]
53. Syp ENSMUSG00000031144 41 0.937 - - 0.937 - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
54. Ap3m2 ENSMUSG00000031539 134 0.935 - - 0.935 - - - adaptor-related protein complex 3, mu 2 subunit [Source:MGI Symbol;Acc:MGI:1929214]
55. Rassf4 ENSMUSG00000042129 1399 0.934 - - 0.934 - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
56. Nr4a3 ENSMUSG00000028341 474 0.93 - - 0.930 - - - nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
57. Exph5 ENSMUSG00000034584 69 0.928 - - 0.928 - - - exophilin 5 [Source:MGI Symbol;Acc:MGI:2443248]
58. Gm13039 ENSMUSG00000083826 11 0.927 - - 0.927 - - - predicted gene 13039 [Source:MGI Symbol;Acc:MGI:3649997]
59. A130049A11Rik A130049A11Rik 44 0.926 - - 0.926 - - -
60. Gm12840 ENSMUSG00000086320 98 0.925 - - 0.925 - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
61. AI836003 AI836003 97 0.924 - - 0.924 - - -
62. Vps37c ENSMUSG00000048832 399 0.924 - - 0.924 - - - vacuolar protein sorting 37C [Source:MGI Symbol;Acc:MGI:2147661]
63. Gck ENSMUSG00000041798 24 0.923 - - 0.923 - - - glucokinase [Source:MGI Symbol;Acc:MGI:1270854]
64. Pard6a ENSMUSG00000005699 236 0.921 - - 0.921 - - - par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]
65. Scarna13 ENSMUSG00000088789 9 0.917 - - 0.917 - - - small Cajal body-specific RNA 1 [Source:MGI Symbol;Acc:MGI:4360027]
66. Igfbpl1 ENSMUSG00000035551 856 0.913 - - 0.913 - - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
67. Unc93b1 ENSMUSG00000036908 77 0.909 - - 0.909 - - - unc-93 homolog B1, TLR signaling regulator [Source:MGI Symbol;Acc:MGI:1859307]
68. Lmx1a ENSMUSG00000026686 123 0.909 - - 0.909 - - - LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
69. Spag1 ENSMUSG00000037617 387 0.908 - - 0.908 - - - sperm associated antigen 1 [Source:MGI Symbol;Acc:MGI:1349387]
70. Jakmip1 ENSMUSG00000063646, ENSMUSG00000113373 41 0.905 - - 0.905 - - - novel protein
71. Zic5 ENSMUSG00000041703 1240 0.903 - - 0.903 - - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
72. Mir682 ENSMUSG00000076236 93 0.902 - - 0.902 - - - microRNA 682 [Source:MGI Symbol;Acc:MGI:3629911]
73. Hoxa3 ENSMUSG00000079560 57 0.901 - - 0.901 - - - homeobox A3 [Source:MGI Symbol;Acc:MGI:96175]
74. Gm10709 ENSMUSG00000074516 18 0.9 - - 0.900 - - - predicted gene 10709 [Source:MGI Symbol;Acc:MGI:3642754]
75. Gm10125 ENSMUSG00000063087 95 0.898 - - 0.898 - - - predicted gene 10125 [Source:MGI Symbol;Acc:MGI:3642044]
76. Naglu ENSMUSG00000001751 142 0.898 - - 0.898 - - - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
77. 6230400D17Rik ENSMUSG00000097577 51 0.893 - - 0.893 - - - RIKEN cDNA 6230400D17 gene [Source:MGI Symbol;Acc:MGI:1923383]
78. Abcb8 ENSMUSG00000028973 649 0.891 - - 0.891 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
79. Brinp2 ENSMUSG00000004031 17 0.889 - - 0.889 - - - bone morphogenic protein/retinoic acid inducible neural-specific 2 [Source:MGI Symbol;Acc:MGI:2443333]
80. Nfatc2ip ENSMUSG00000030722 920 0.889 - - 0.889 - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
81. Gm20707 ENSMUSG00000093594 116 0.886 - - 0.886 - - - predicted gene 20707 [Source:MGI Symbol;Acc:MGI:5313154]
82. Stk10 ENSMUSG00000020272 446 0.882 - - 0.882 - - - serine/threonine kinase 10 [Source:MGI Symbol;Acc:MGI:1099439]
83. Dll1 ENSMUSG00000014773 633 0.878 - - 0.878 - - - delta like canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:104659]
84. Gm15191 ENSMUSG00000082778 136 0.877 - - 0.877 - - - predicted gene 15191 [Source:MGI Symbol;Acc:MGI:3708125]
85. Rspo3 ENSMUSG00000019880 485 0.875 - - 0.875 - - - R-spondin 3 [Source:MGI Symbol;Acc:MGI:1920030]
86. Capn15 ENSMUSG00000037326 23 0.875 - - 0.875 - - - calpain 15 [Source:MGI Symbol;Acc:MGI:1355075]
87. Rftn1 ENSMUSG00000039316 375 0.874 - - 0.874 - - - raftlin lipid raft linker 1 [Source:MGI Symbol;Acc:MGI:1923688]
88. Gm3362 ENSMUSG00000085442 127 0.873 - - 0.873 - - - predicted pseudogene 3362 [Source:MGI Symbol;Acc:MGI:3781540]
89. Art1 ENSMUSG00000030996 72 0.873 - - 0.873 - - - ADP-ribosyltransferase 1 [Source:MGI Symbol;Acc:MGI:107511]
90. Olig3 ENSMUSG00000045591 1049 0.869 - - 0.869 - - - oligodendrocyte transcription factor 3 [Source:MGI Symbol;Acc:MGI:2149955]
91. Rhof ENSMUSG00000029449 202 0.866 - - 0.866 - - - ras homolog family member F (in filopodia) [Source:MGI Symbol;Acc:MGI:1345629]
92. Abca3 ENSMUSG00000024130 102 0.865 - - 0.865 - - - ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]
93. Slc25a45 ENSMUSG00000024818 245 0.864 - - 0.864 - - - solute carrier family 25, member 45 [Source:MGI Symbol;Acc:MGI:2147731]
94. Dvl3 ENSMUSG00000003233 353 0.863 - - 0.863 - - - dishevelled segment polarity protein 3 [Source:MGI Symbol;Acc:MGI:108100]
95. Pacsin1 ENSMUSG00000040276 185 0.861 - - 0.861 - - - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
96. Mamdc2 ENSMUSG00000033207 73 0.859 - - 0.859 - - - MAM domain containing 2 [Source:MGI Symbol;Acc:MGI:1918988]
97. Pnldc1 ENSMUSG00000073460 25 0.856 - - 0.856 - - - poly(A)-specific ribonuclease (PARN)-like domain containing 1 [Source:MGI Symbol;Acc:MGI:2685159]
98. Adamts8 ENSMUSG00000031994 98 0.855 - - 0.855 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8 [Source:MGI Symbol;Acc:MGI:1353468]
99. Msx3 ENSMUSG00000025469 236 0.847 - - 0.847 - - - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
100. Unc13b ENSMUSG00000028456 543 0.844 - - 0.844 - - - unc-13 homolog B [Source:MGI Symbol;Acc:MGI:1342278]

There are 94 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA