Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Vat1

Gene Name Gene ID Reads Annotation
Vat1 ENSMUSG00000034993 91 vesicle amine transport 1 [Source:MGI Symbol;Acc:MGI:1349450]







Genes with expression patterns similar to Vat1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vat1 ENSMUSG00000034993 91 6 1.000 1.000 1.000 1.000 1.000 1.000 vesicle amine transport 1 [Source:MGI Symbol;Acc:MGI:1349450]
2. Spg11 ENSMUSG00000033396 23 0.875 - - 0.875 - - - SPG11, spatacsin vesicle trafficking associated [Source:MGI Symbol;Acc:MGI:2444989]
3. Gm3671 ENSMUSG00000098232 3 0.873 - - 0.873 - - - predicted gene 3671 [Source:MGI Symbol;Acc:MGI:3781847]
4. Gm26740 ENSMUSG00000097705 13 0.87 - - 0.870 - - - predicted gene, 26740 [Source:MGI Symbol;Acc:MGI:5477234]
5. AU018091 ENSMUSG00000054753, ENSMUSG00000107871 10 0.869 - - 0.869 - - - expressed sequence AU018091 [Source:MGI Symbol;Acc:MGI:2142124]
6. Jph4 ENSMUSG00000022208 95 0.868 - - 0.868 - - - junctophilin 4 [Source:MGI Symbol;Acc:MGI:2443113]
7. 2010001K21Rik ENSMUSG00000051606 3 0.867 - - 0.867 - - - RIKEN cDNA 2010001K21 gene [Source:MGI Symbol;Acc:MGI:1917079]
8. Grin2a ENSMUSG00000059003 9 0.865 - - 0.865 - - - glutamate receptor, ionotropic, NMDA2A (epsilon 1) [Source:MGI Symbol;Acc:MGI:95820]
9. Apob ENSMUSG00000020609 7 0.865 - - 0.865 - - - apolipoprotein B [Source:MGI Symbol;Acc:MGI:88052]
10. Gm6451 ENSMUSG00000084166 11 0.865 - - 0.865 - - - predicted gene 6451 [Source:MGI Symbol;Acc:MGI:3648305]
11. Gm5537 ENSMUSG00000069008 2 0.865 - - 0.865 - - - predicted gene 5537 [Source:MGI Symbol;Acc:MGI:3643179]
12. Cyp2c44 11 0.865 - - 0.865 - - - cytochrome P450, family 2, subfamily c, polypeptide 44, transcript variant X1
13. Gm23667 ENSMUSG00000088091 2 0.865 - - 0.865 - - - predicted gene, 23667 [Source:MGI Symbol;Acc:MGI:5453444]
14. Mageb16 ENSMUSG00000046942 27 0.865 - - 0.865 - - - melanoma antigen family B, 16 [Source:MGI Symbol;Acc:MGI:1919217]
15. Gm16372 ENSMUSG00000057160 2 0.865 - - 0.865 - - - predicted pseudogene 16372 [Source:MGI Symbol;Acc:MGI:3648102]
16. Gm24519 ENSMUSG00000096675 3 0.865 - - 0.865 - - - predicted gene, 24519 [Source:MGI Symbol;Acc:MGI:5454296]
17. Gm17473 ENSMUSG00000097805 2 0.865 - - 0.865 - - - predicted gene, 17473 [Source:MGI Symbol;Acc:MGI:4937107]
18. Gm26163 ENSMUSG00000065726 4 0.865 - - 0.865 - - - predicted gene, 26163 [Source:MGI Symbol;Acc:MGI:5455940]
19. Gm410 Gm410 9 0.865 - - 0.865 - - -
20. Smtnl1 ENSMUSG00000027077 5 0.865 - - 0.865 - - - smoothelin-like 1 [Source:MGI Symbol;Acc:MGI:1915928]
21. Gm15408 ENSMUSG00000086610 8 0.857 - - 0.857 - - - predicted gene 15408 [Source:MGI Symbol;Acc:MGI:3705101]
22. Gm26748 ENSMUSG00000097548 7 0.854 - - 0.854 - - - predicted gene, 26748 [Source:MGI Symbol;Acc:MGI:5477242]
23. Eva1c ENSMUSG00000039903 8 0.852 - - 0.852 - - - eva-1 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1918217]
24. Cblc ENSMUSG00000040525 8 0.851 - - 0.851 - - - Casitas B-lineage lymphoma c [Source:MGI Symbol;Acc:MGI:1931457]
25. 1700028I16Rik ENSMUSG00000056821 3 0.85 - - 0.850 - - - RIKEN cDNA 1700028I16 gene [Source:MGI Symbol;Acc:MGI:1917253]
26. Zbtb8a ENSMUSG00000028807 233 0.849 - - 0.849 - - - zinc finger and BTB domain containing 8a [Source:MGI Symbol;Acc:MGI:1920930]
27. Gm53 ENSMUSG00000078706 79 0.848 - - 0.848 - - - predicted gene 53 [Source:MGI Symbol;Acc:MGI:2684899]
28. Gm6938 ENSMUSG00000087586 8 0.848 - - 0.848 - - - predicted gene 6938 [Source:MGI Symbol;Acc:MGI:3648987]
29. Tlr2 ENSMUSG00000027995 23 0.848 - - 0.848 - - - toll-like receptor 2 [Source:MGI Symbol;Acc:MGI:1346060]
30. Ccdc109b 54 0.847 - - 0.847 - - - coiled-coil domain containing 109B, transcript variant X3
31. Gm14324 ENSMUSG00000080709 31 0.847 - - 0.847 - - - predicted gene 14324 [Source:MGI Symbol;Acc:MGI:3652186]
32. Fam20a ENSMUSG00000020614 6 0.847 - - 0.847 - - - family with sequence similarity 20, member A [Source:MGI Symbol;Acc:MGI:2388266]
33. Plekhs1 ENSMUSG00000035818 6 0.846 - - 0.846 - - - pleckstrin homology domain containing, family S member 1 [Source:MGI Symbol;Acc:MGI:2443041]
34. Pdyn ENSMUSG00000027400 24 0.846 - - 0.846 - - - prodynorphin [Source:MGI Symbol;Acc:MGI:97535]
35. G730013B05Rik ENSMUSG00000097694 5 0.843 - - 0.843 - - - RIKEN cDNA G730013B05 gene [Source:MGI Symbol;Acc:MGI:3588276]
36. Rpl23a-ps2 ENSMUSG00000081968 114 0.842 - - 0.842 - - - ribosomal protein L23A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651561]
37. Gm12829 ENSMUSG00000085870 7 0.841 - - 0.841 - - - predicted gene 12829 [Source:MGI Symbol;Acc:MGI:3650003]
38. Gm13785 ENSMUSG00000081730 24 0.839 - - 0.839 - - - predicted gene 13785 [Source:MGI Symbol;Acc:MGI:3649781]
39. Lrrtm2 ENSMUSG00000071862 15 0.838 - - 0.838 - - - leucine rich repeat transmembrane neuronal 2 [Source:MGI Symbol;Acc:MGI:2389174]
40. BC100451 15 0.836 - - 0.836 - - - cDNA sequence BC100451, transcript variant X3
41. Gm4925 ENSMUSG00000069540 30 0.835 - - 0.835 - - - predicted gene 4925 [Source:MGI Symbol;Acc:MGI:3643371]
42. BC053749 BC053749 21 0.832 - - 0.832 - - -
43. 1700028J19Rik ENSMUSG00000038782 43 0.832 - - 0.832 - - - RIKEN cDNA 1700028J19 gene [Source:MGI Symbol;Acc:MGI:1917254]
44. mmu-mir-6951 mmu-mir-6951 10 0.831 - - 0.831 - - -
45. A330009N23Rik ENSMUSG00000097915 40 0.827 - - 0.827 - - - RIKEN cDNA A330009N23 gene [Source:MGI Symbol;Acc:MGI:2443491]
46. Gm26724 ENSMUSG00000097090 14 0.824 - - 0.824 - - - predicted gene, 26724 [Source:MGI Symbol;Acc:MGI:5477218]
47. Gm9246 ENSMUSG00000082080 55 0.824 - - 0.824 - - - predicted gene 9246 [Source:MGI Symbol;Acc:MGI:3648324]
48. Pvrl4 Pvrl4 14 0.823 - - 0.823 - - -
49. Ap5b1 ENSMUSG00000049562 25 0.822 - - 0.822 - - - adaptor-related protein complex 5, beta 1 subunit [Source:MGI Symbol;Acc:MGI:2685808]
50. Wdr93 ENSMUSG00000039099 10 0.822 - - 0.822 - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
51. Slc6a15 ENSMUSG00000019894 81 0.818 - - 0.818 - - - solute carrier family 6 (neurotransmitter transporter), member 15 [Source:MGI Symbol;Acc:MGI:2143484]
52. 3830403N18Rik ENSMUSG00000031125 31 0.816 - - 0.816 - - - RIKEN cDNA 3830403N18 gene [Source:MGI Symbol;Acc:MGI:1917941]
53. Ormdl2 ENSMUSG00000025353 5 0.814 - - 0.814 - - - ORM1-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914094]
54. Vwc2 ENSMUSG00000050830 16 0.813 - - 0.813 - - - von Willebrand factor C domain containing 2 [Source:MGI Symbol;Acc:MGI:2442987]
55. Noxred1 ENSMUSG00000072919 33 0.812 - - 0.812 - - - NADP+ dependent oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:1918525]
56. Gm26604 ENSMUSG00000097079 11 0.811 - - 0.811 - - - predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
57. Slc38a7 ENSMUSG00000036534 269 0.807 - - 0.807 - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
58. Gm10247 ENSMUSG00000068674 23 0.806 - - 0.806 - - - predicted gene 10247 [Source:MGI Symbol;Acc:MGI:3641838]
59. 4731419I09Rik ENSMUSG00000097004 89 0.806 - - 0.806 - - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
60. Nnmt ENSMUSG00000032271 21 0.805 - - 0.805 - - - nicotinamide N-methyltransferase [Source:MGI Symbol;Acc:MGI:1099443]
61. Cav1 ENSMUSG00000007655 290 0.802 - - 0.802 - - - caveolin 1, caveolae protein [Source:MGI Symbol;Acc:MGI:102709]
62. Gm14038 ENSMUSG00000083879 14 0.801 - 0.801 - - - - predicted gene 14038 [Source:MGI Symbol;Acc:MGI:3650657]
63. Wbscr25 ENSMUSG00000054909 10 0.801 - - 0.801 - - - Williams Beuren syndrome chromosome region 25 (human) [Source:MGI Symbol;Acc:MGI:1918554]
64. Hmgb1-ps7 ENSMUSG00000092281 9 0.8 - - 0.800 - - - high-mobility group high mobility group box 1, pseudogene 7 [Source:MGI Symbol;Acc:MGI:3648695]
65. Gm12294 ENSMUSG00000083935 21 0.798 - - 0.798 - - - predicted gene 12294 [Source:MGI Symbol;Acc:MGI:3649526]
66. Lrrk2 ENSMUSG00000036273 55 0.796 - - 0.796 - - - leucine-rich repeat kinase 2 [Source:MGI Symbol;Acc:MGI:1913975]
67. Hist1h2bb ENSMUSG00000075031 94 0.795 - - 0.795 - - - histone cluster 1, H2bb [Source:MGI Symbol;Acc:MGI:2448377]
68. E330020D12Rik ENSMUSG00000073538 25 0.79 - - 0.790 - - - Riken cDNA E330020D12 gene [Source:MGI Symbol;Acc:MGI:3761270]
69. Fam71f2 ENSMUSG00000079652 8 0.789 - - 0.789 - - - family with sequence similarity 71, member F2 [Source:MGI Symbol;Acc:MGI:2141439]
70. Gm26639 ENSMUSG00000097562 3 0.788 - 0.788 - - - - predicted gene, 26639 [Source:MGI Symbol;Acc:MGI:5477133]
71. Gm8317 ENSMUSG00000084276 4 0.788 - 0.788 - - - - predicted gene 8317 [Source:MGI Symbol;Acc:MGI:3646695]
72. C1ql3 ENSMUSG00000049630 47 0.788 - 0.788 - - - - C1q-like 3 [Source:MGI Symbol;Acc:MGI:2387350]
73. 1700031F05Rik ENSMUSG00000032894 2 0.788 - 0.788 - - - - RIKEN cDNA 1700031F05 gene [Source:MGI Symbol;Acc:MGI:1920550]
74. Pou4f3 ENSMUSG00000024497 58 0.788 - 0.788 - - - - POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
75. Ascl4 ENSMUSG00000085111 8 0.788 - 0.788 - - - - achaete-scute family bHLH transcription factor 4 [Source:MGI Symbol;Acc:MGI:1914591]
76. Tcf23 ENSMUSG00000006642 5 0.788 - 0.788 - - - - transcription factor 23 [Source:MGI Symbol;Acc:MGI:1934960]
77. Nkx1-2 ENSMUSG00000048528 9 0.788 - 0.788 - - - - NK1 homeobox 2 [Source:MGI Symbol;Acc:MGI:104806]
78. Bpifa2 ENSMUSG00000042459 6 0.788 - 0.788 - - - - BPI fold containing family A, member 2 [Source:MGI Symbol;Acc:MGI:97787]
79. Gm10548 ENSMUSG00000073607 31 0.787 - - 0.787 - - - predicted gene 10548 [Source:MGI Symbol;Acc:MGI:3641893]
80. Gm26765 ENSMUSG00000097664 4 0.785 - - 0.785 - - - predicted gene, 26765 [Source:MGI Symbol;Acc:MGI:5477259]
81. Tnfsf15 ENSMUSG00000050395 14 0.783 - 0.783 - - - - tumor necrosis factor (ligand) superfamily, member 15 [Source:MGI Symbol;Acc:MGI:2180140]
82. Gm6808 ENSMUSG00000090162 21 0.783 - 0.783 - - - - predicted gene 6808 [Source:MGI Symbol;Acc:MGI:3645881]
83. 4933413G19Rik 16 0.783 - 0.783 - - - - RIKEN cDNA 4933413G19 gene
84. Adhfe1 ENSMUSG00000025911 26 0.783 - 0.783 - - - - alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
85. Gm14391 ENSMUSG00000078903 51 0.782 - - 0.782 - - - predicted gene 14391 [Source:MGI Symbol;Acc:MGI:3709324]
86. 5930403N24Rik ENSMUSG00000046463 12 0.781 - - 0.781 - - - RIKEN cDNA 5930403N24 gene [Source:MGI Symbol;Acc:MGI:2444171]
87. 6030443J06Rik ENSMUSG00000097207 38 0.78 - - 0.780 - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
88. Ccdc150 ENSMUSG00000025983 27 0.779 - - 0.779 - - - coiled-coil domain containing 150 [Source:MGI Symbol;Acc:MGI:1925266]
89. Hist1h2ab ENSMUSG00000061615 94 0.779 - - 0.779 - - - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
90. G430049J08Rik ENSMUSG00000096528 73 0.778 - 0.778 - - - - RIKEN cDNA G430049J08 gene [Source:MGI Symbol;Acc:MGI:3645649]
91. Gm6395 ENSMUSG00000091905 164 0.778 - - 0.778 - - - predicted gene 6395 [Source:MGI Symbol;Acc:MGI:3645295]
92. Gm14872 Gm14872 9 0.778 - - 0.778 - - -
93. Igsf1 ENSMUSG00000031111 123 0.776 - - 0.776 - - - immunoglobulin superfamily, member 1 [Source:MGI Symbol;Acc:MGI:2147913]
94. Alx3 ENSMUSG00000014603 384 0.774 - - 0.774 - - - aristaless-like homeobox 3 [Source:MGI Symbol;Acc:MGI:1277097]
95. Fam189a2 ENSMUSG00000071604 71 0.774 - 0.774 - - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
96. Gm13323 ENSMUSG00000081851 5 0.772 - - 0.772 - - - predicted gene 13323 [Source:MGI Symbol;Acc:MGI:3650423]
97. Ttll13 ENSMUSG00000045467 27 0.768 - - 0.768 - - - tubulin tyrosine ligase-like family, member 13 [Source:MGI Symbol;Acc:MGI:1920845]
98. Sec1 ENSMUSG00000040364 64 0.767 - - - 0.767 - - secretory blood group 1 [Source:MGI Symbol;Acc:MGI:1928893]
99. Gm20731 ENSMUSG00000102912 41 0.767 - 0.767 - - - - predicted gene, 20731 [Source:MGI Symbol;Acc:MGI:5313040]
100. Gm25467 Gm25467 24 0.765 - - 0.765 - - -

There are 55 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA