Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VWDE_1

Gene Name Gene ID Reads Annotation
VWDE_1 VWDE_1 2










Genes with expression patterns similar to VWDE_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. VWDE_1 VWDE_1 2 4 1.000 - - - 1.000 - 1.000 1.000 -
2. cthrc1b ENSDARG00000001971 44 2 1.000 - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
3. CR942805.1 CR942805.1 94 2 - - - - 1.000 - 1.000 - -
4. si:dkey-148b12.4 si:dkey-148b12.4 2 2 - - - - 1.000 - 1.000 - -
5. NPFFR1 ENSDARG00000111997 29 2 1.000 - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
6. CD200_2 CD200_2 47 1.943 1.000 - - - - - 0.943 - -
7. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.836 1.000 - - - - - 0.836 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
8. CR383676.3_2 CR383676.3_2 9 1.798 1.000 - - - - - 0.798 - -
9. GPR78 GPR78 17 1.753 - - - - 0.753 - 1.000 - -
10. BX470224.1 ENSDARG00000092793 22 1.72 - - - - 1.000 - - 0.720 -
11. ENSDARG00000074422 ENSDARG00000074422 61 1.71 - - - - - - 1.000 0.710 -
12. fam136a ENSDARG00000098401 50 1.628 0.926 - - - - - 0.702 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
13. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
14. si:dkeyp-50f5.4 si:dkeyp-50f5.4 0 1 - - - - 1.000 - - - -
15. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
16. zgc:101560 1 1 - - - - 1.000 - - - - zgc:101560, transcript variant 2
17. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
18. lingo2 lingo2 67 1 1.000 - - - - - - - -
19. nid2b ENSDARG00000009471 4 1 - - - - 1.000 - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
20. CABZ01086801.1 CABZ01086801.1 41 1 - - - - 1.000 - - - -
21. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - - - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
22. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
23. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
24. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - - 1.000 - - - -
25. BX323035.1 ENSDARG00000096937 0 1 - - - - 1.000 - - - -
26. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
27. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
28. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - 1.000 - - - -
29. zgc:194418 ENSDARG00000111790 1 1 - - - - 1.000 - - - - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
30. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
31. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
32. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
33. scpp1 ENSDARG00000090416 1 1 - - - - 1.000 - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
34. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
35. ENSDARG00000077328 ENSDARG00000077328 1 1 - - - - - - 1.000 - -
36. neu4 ENSDARG00000057677 1 1 - - - - 1.000 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
37. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
38. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
39. PHF15 PHF15 2 1 - - - - 1.000 - - - -
40. LAMB3 LAMB3 31 1 - - - - 1.000 - - - -
41. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
42. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
43. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - 1.000 - - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
44. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
45. si:dkey-21o22.2 ENSDARG00000094118 0 1 - - - - 1.000 - - - - si:dkey-21o22.2 [Source:ZFIN;Acc:ZDB-GENE-061106-4]
46. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
47. BX649394.1 BX649394.1 1 1 - - - - 1.000 - - - -
48. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
49. v2ra16 ENSDARG00000091990 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a16 [Source:ZFIN;Acc:ZDB-GENE-050419-85]
50. tmem184b tmem184b 2 1 1.000 - - - - - - - -
51. CR855307.2 CR855307.2 1 1 - - - - 1.000 - - - -
52. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
53. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
54. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
55. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
56. wdr20b ENSDARG00000041239 0 1 - - - - 1.000 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
57. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
58. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
59. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
60. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
61. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
62. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
63. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
64. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
65. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
66. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
67. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
68. CR774179.1 ENSDARG00000086969 3 1 - - - - 1.000 - - - -
69. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
70. SLC1A7 SLC1A7 3 1 1.000 - - - - - - - -
71. ZBED1 ZBED1 2 1 - - - - 1.000 - - - -
72. wdr4 ENSDARG00000090581 42 1 - - - - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
73. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
74. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
75. PDE4A ENSDARG00000032344 1 1 - - - - 1.000 - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
76. FAM185A ENSDARG00000019142 3 1 - - - - 1.000 - - - - family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
77. GPC5 GPC5 11 1 - - - - 1.000 - - - -
78. PLD4 1 1 - - - - 1.000 - - - - phospholipase D family member 4
79. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
80. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
81. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
82. si:ch211-162i8.2 ENSDARG00000096041 4 1 - - - - 1.000 - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
83. BSN_1 BSN_1 21 1 - - - - 1.000 - - - -
84. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
85. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - - 1.000 - - - -
86. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
87. psmb8 psmb8 0 1 - - - - 1.000 - - - -
88. nitr1i ENSDARG00000033963 0 1 - - - - 1.000 - - - - novel immune-type receptor 1i [Source:ZFIN;Acc:ZDB-GENE-001106-3]
89. ZAN ZAN 11 1 - - - - 1.000 - - - -
90. SLC25A22_1 SLC25A22_1 3 1 - - - - - - 1.000 - -
91. zgc:113307 ENSDARG00000044894 17 1 - - - - 1.000 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
92. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - 1.000 - - - -
93. b3galtlb b3galtlb 27 1 - - - - - - 1.000 - -
94. BX548011.3 ENSDARG00000113526 2 1 - - - - 1.000 - - - -
95. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
96. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
97. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
98. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
99. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
100. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -

There are 441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA