Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VWDE_1

Gene Name Gene ID Reads Annotation
VWDE_1 VWDE_1 2










Genes with expression patterns similar to VWDE_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. VWDE_1 VWDE_1 2 4 1.000 - - - 1.000 - 1.000 1.000 -
2. cthrc1b ENSDARG00000001971 44 2 1.000 - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
3. NPFFR1 ENSDARG00000111997 29 2 1.000 - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
4. CR942805.1 CR942805.1 94 2 - - - - 1.000 - 1.000 - -
5. si:dkey-148b12.4 si:dkey-148b12.4 2 2 - - - - 1.000 - 1.000 - -
6. CD200_2 CD200_2 47 1.943 1.000 - - - - - 0.943 - -
7. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.836 1.000 - - - - - 0.836 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
8. CR383676.3_2 CR383676.3_2 9 1.798 1.000 - - - - - 0.798 - -
9. GPR78 GPR78 17 1.753 - - - - 0.753 - 1.000 - -
10. BX470224.1 ENSDARG00000092793 22 1.72 - - - - 1.000 - - 0.720 -
11. ENSDARG00000074422 ENSDARG00000074422 61 1.71 - - - - - - 1.000 0.710 -
12. fam136a ENSDARG00000098401 50 1.628 0.926 - - - - - 0.702 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
13. U4atac U4atac 47 1 - - - - - - 1.000 - -
14. tlr8b ENSDARG00000073675 0 1 - - - - 1.000 - - - - toll-like receptor 8b [Source:ZFIN;Acc:ZDB-GENE-040219-12]
15. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
16. lipt2 ENSDARG00000069852 14 1 - - - - - - 1.000 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
17. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
18. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
19. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
20. AL935200.4 AL935200.4 3 1 - - - - 1.000 - - - -
21. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
22. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
23. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
24. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
25. U12 U12 14 1 - - - - 1.000 - - - -
26. lingo2 lingo2 67 1 1.000 - - - - - - - -
27. si:ch211-73m21.2 si:ch211-73m21.2 5 1 - - - - 1.000 - - - -
28. asic4a ENSDARG00000025162 25 1 - - - - 1.000 - - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
29. si:ch211-266a5.12 ENSDARG00000092714 10 1 - - - - 1.000 - - - - si:ch211-266a5.12 [Source:ZFIN;Acc:ZDB-GENE-081104-210]
30. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
31. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
32. ENSDARG00000077328 ENSDARG00000077328 1 1 - - - - - - 1.000 - -
33. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - 1.000 - - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
34. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
35. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - 1.000 - -
36. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
37. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - 1.000 - - - -
38. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
39. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
40. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
41. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - - 1.000 - - - -
42. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
43. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
44. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
45. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
46. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
47. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
48. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
49. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
50. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
51. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
52. rrad ENSDARG00000052011, ENSDARG00000112434 70 1 - - - - - - 1.000 - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
53. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
54. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
55. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 1.000 - - - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
56. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
57. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
58. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
59. si:dkey-203o21.2 si:dkey-203o21.2 0 1 - - - - 1.000 - - - -
60. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
61. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 1 - - - - 1.000 - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
62. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
63. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
64. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
65. APOBEC2 APOBEC2 9 1 - - - - - - - 1.000 -
66. CABZ01048549.1 CABZ01048549.1 1 1 - - - - - - 1.000 - -
67. zgc:112958 zgc:112958 5 1 - - - - 1.000 - - - -
68. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
69. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - 1.000 - - - -
70. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
71. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
72. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
73. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
74. CABZ01025394.1 CABZ01025394.1 1 1 - - - - - - - 1.000 -
75. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
76. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - 1.000 - - - -
77. SH3RF3 ENSDARG00000102334 1 1 - - - - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
78. SNORA16 SNORA16 0 1 - - - - 1.000 - - - -
79. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
80. VTCN1 ENSDARG00000078643 0 1 - - - - 1.000 - - - - V-set domain containing T cell activation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-388]
81. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
82. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
83. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
84. zgc:194418 ENSDARG00000111790 1 1 - - - - 1.000 - - - - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
85. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
86. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
87. U5_3 U5_3 3 1 1.000 - - - - - - - -
88. sim1b ENSDARG00000013789 47 1 - - - - - - 1.000 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
89. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
90. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
91. neu4 ENSDARG00000057677 1 1 - - - - 1.000 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
92. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
93. CABZ01021454.2 CABZ01021454.2 3 1 - - - - 1.000 - - - -
94. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
95. CR855307.2 CR855307.2 1 1 - - - - 1.000 - - - -
96. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - 1.000 - - - - si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
97. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
98. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
99. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
100. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]

There are 441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA