Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VWDE

Gene Name Gene ID Reads Annotation
VWDE ENSGALG00000042443 160 von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]











Genes with expression patterns similar to VWDE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VWDE ENSGALG00000042443 160 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
2. NUDT4 ENSGALG00000011285 2998 1.794 - - 0.859 0.935 - - - - - - nudix hydrolase 4, transcript variant X5
3. KCNK5 ENSGALG00000034077 3233 1.77 - - 0.887 0.883 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
4. TRAPPC12 ENSGALG00000016387 2593 1.668 - - - 0.903 - - 0.765 - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
5. FAM3B ENSGALG00000016140 111 1.644 - - 0.918 - - - - - - 0.726 family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
6. EPHA1 ENSGALG00000014687 174 1.637 - - 0.916 - - - 0.721 - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
7. RAB33B ENSGALG00000009790 2340 1.629 - - - 0.914 0.715 - - - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
8. AFG3L2 ENSGALG00000013853 1138 1.618 - - 0.730 - - - 0.888 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
9. ARPP19 ENSGALG00000017370 1720 1.609 - - - 0.866 - - 0.743 - - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
10. RNF8 ENSGALG00000023256 5495 1.598 - - 0.707 0.891 - - - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
11. ECHDC2 ENSGALG00000010647 4413 1.583 - - 0.802 0.781 - - - - - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
12. EMP2 ENSGALG00000027058 3925 1.543 - - 0.836 - - - 0.707 - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
13. HTATSF1 ENSGALG00000006410 3526 1.478 - - 0.734 0.744 - - - - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
14. SS2R SS2R 3 1 - - - - - - - - - 1.000
15. MLH3 ENSGALG00000010304 231 0.995 - - - 0.995 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
16. ZBTB17 ENSGALG00000035352 280 0.995 - - - 0.995 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
17. DBN1 ENSGALG00000033405 216 0.993 - - - 0.993 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
18. KIF6 ENSGALG00000010057 84 0.992 - - - 0.992 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
19. ENSGALG00000027412 ENSGALG00000027412 202 0.991 - - - 0.991 - - - - - -
20. TRIM62 ENSGALG00000028437 5124 0.989 - - - 0.989 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
21. CA3 CA3 200 0.988 - - - 0.988 - - - - - -
22. KIAA1432 KIAA1432 1792 0.988 - - - 0.988 - - - - - -
23. GFPT2 ENSGALG00000039705 562 0.988 - - - 0.988 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
24. TBK1 ENSGALG00000009840 1650 0.987 - - - 0.987 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
25. FRRS1 ENSGALG00000005418 332 0.985 - - - 0.985 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
26. ADCY9 ENSGALG00000007779 766 0.984 - - - 0.984 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
27. SNORA31 SNORA31 183 0.983 - - - 0.983 - - - - - -
28. GUF1 ENSGALG00000014217 211 0.98 - - - 0.980 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
29. RNPC3 ENSGALG00000005162 269 0.979 - - - 0.979 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
30. WDR96 WDR96 255 0.978 - - - 0.978 - - - - - -
31. IFT43 ENSGALG00000020415 1218 0.973 - - - 0.973 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
32. PRKD1 ENSGALG00000009900 2094 0.971 - - - 0.971 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
33. NCOA3 ENSGALG00000004570 243 0.97 - - - 0.970 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
34. ASRGL1 ENSGALG00000015949 403 0.968 - - - 0.968 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
35. PASK ENSGALG00000006016 3096 0.968 - - - 0.968 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
36. CYP20A1 ENSGALG00000008730 930 0.967 - - - 0.967 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
37. RBFOX1 ENSGALG00000034325 2133 0.966 - - - 0.966 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
38. COPA ENSGALG00000009153 11618 0.965 - - - 0.965 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
39. ITGA9 ENSGALG00000029378 415 0.964 - - - 0.964 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
40. GALNT12 ENSGALG00000013197 1330 0.963 - - - 0.963 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
41. LRRCC1 ENSGALG00000039499 480 0.963 - - - 0.963 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
42. MCCC2L ENSGALG00000011255 889 0.962 - - - 0.962 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
43. VPS13B 2293 0.962 - - - 0.962 - - - - - - vacuolar protein sorting 13 homolog B
44. TMOD1 ENSGALG00000002125 933 0.96 - - - 0.960 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
45. MRPS30 ENSGALG00000014874 3416 0.96 - - - 0.960 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
46. ITPKB ENSGALG00000009068 324 0.959 - - - 0.959 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
47. HPS5 ENSGALG00000027716 2466 0.959 - - - 0.959 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
48. DEPDC5 ENSGALG00000006766 1592 0.957 - - - 0.957 - - - - - - DEP domain containing 5, transcript variant X6
49. PANK1 ENSGALG00000006431 2910 0.955 - - - 0.955 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
50. ASCC1 ENSGALG00000026019 3583 0.955 - - - 0.955 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
51. GRID1 ENSGALG00000037366 159 0.952 - - - - - - 0.952 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
52. ADAP2 ENSGALG00000003319 134 0.952 - - - - - - 0.952 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
53. TGS1 ENSGALG00000015340 5897 0.952 - - - 0.952 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
54. PDE4B ENSGALG00000011094 1871 0.951 - - - 0.951 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
55. PRDM4 ENSGALG00000012619 876 0.951 - - - 0.951 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
56. DPY30 ENSGALG00000010621 6818 0.951 - - - 0.951 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
57. ELMOD1 ENSGALG00000017169 2303 0.951 - - - 0.951 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
58. HINT3 ENSGALG00000044342 5674 0.95 - - - 0.950 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
59. RNF170 ENSGALG00000015386 296 0.949 - - - - - - 0.949 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
60. EFCAB7 ENSGALG00000010998 13 0.949 - - - - - - 0.949 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
61. CHCHD3 ENSGALG00000006489 18592 0.948 - - - 0.948 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
62. BAG5 ENSGALG00000031062 4498 0.948 - - - 0.948 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
63. NME6 ENSGALG00000038044 1231 0.948 - - - 0.948 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
64. ARHGAP12 ENSGALG00000007254 479 0.947 - - - - - - 0.947 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
65. HMHA1 HMHA1 929 0.947 - - - 0.947 - - - - - -
66. CHST9 ENSGALG00000019489 21 0.946 - - - - - - 0.946 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
67. FAM46C 13 0.946 - - - - - - 0.946 - - - family with sequence similarity 46 member C
68. KIAA1462 1612 0.946 - - - 0.946 - - - - - - KIAA1462, transcript variant X4
69. MTOR ENSGALG00000003339 328 0.946 - - - - - - 0.946 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
70. CBLN1 ENSGALG00000042664 15 0.946 - - - - - - 0.946 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
71. MAP3K19 ENSGALG00000028457 17 0.946 - - - - - - 0.946 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
72. MBL2 ENSGALG00000002507 17 0.946 - - - - - - 0.946 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
73. AKT1 ENSGALG00000011620 4089 0.943 - - - 0.943 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
74. IRF6 ENSGALG00000001405 3144 0.943 - - - 0.943 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
75. PANX1 ENSGALG00000039751 70 0.941 - - - - - - 0.941 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
76. HN1L HN1L 247 0.94 - - - - - - 0.940 - - -
77. ASPH ENSGALG00000030112 1622 0.94 - - - 0.940 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
78. MOSPD1 ENSGALG00000006132 8503 0.938 - - - 0.938 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
79. CXADR ENSGALG00000015701 96 0.938 - - - - - - 0.938 - - - coxsackie virus and adenovirus receptor, transcript variant X2
80. CAT-1 CAT-1 115 0.937 - - - - - - 0.937 - - -
81. SYT8 ENSGALG00000006602 369 0.937 - - - - - - 0.937 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
82. KIAA1244 KIAA1244 62 0.937 - - - - - - 0.937 - - -
83. PTPN21 ENSGALG00000010616 129 0.936 - - - - - - 0.936 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
84. NPL ENSGALG00000004614 617 0.936 - - - 0.936 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
85. PPFIA1 ENSGALG00000035774 5258 0.935 - - - 0.935 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
86. RSBN1 ENSGALG00000001860 761 0.935 - - - 0.935 - - - - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
87. PDZK1IP1 ENSGALG00000010473 551 0.935 - - 0.935 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
88. SLC16A14 ENSGALG00000002897 157 0.935 - - - - - - 0.935 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
89. NECAB3 ENSGALG00000003065 417 0.935 - - - 0.935 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
90. EML5 ENSGALG00000010639 25 0.934 - - 0.934 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
91. CXorf23 1582 0.934 - - - 0.934 - - - - - - chromosome X open reading frame 23, transcript variant X3
92. AHR2 ENSGALG00000023742 21 0.933 - - 0.933 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
93. SCTR ENSGALG00000012106 49 0.933 - - - - - - 0.933 - - - secretin receptor [Source:NCBI gene;Acc:770943]
94. C1orf21 ENSGALG00000020922 4035 0.933 - - - 0.933 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
95. DPP8 ENSGALG00000007437 1763 0.932 - - - 0.932 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
96. KIN ENSGALG00000030702 1608 0.932 - - - 0.932 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
97. TFB1M ENSGALG00000013647 84 0.932 - - - - - - 0.932 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
98. GTF3C4 ENSGALG00000031016 1221 0.932 - - - 0.932 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
99. SUMO1 ENSGALG00000008435 19847 0.932 - - - 0.932 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
100. C12orf45 C12orf45 2445 0.931 - - - 0.931 - - - - - -

There are 651 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA