Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VTI1B

Gene Name Gene ID Reads Annotation
VTI1B ENSGALG00000009526 133 vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]











Genes with expression patterns similar to VTI1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VTI1B ENSGALG00000009526 133 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
2. ATP6V1AL ENSGALG00000000048 21 1.804 - - - - - 0.849 0.955 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
3. PHTF2 ENSGALG00000008335 722 1.731 - - 0.867 - - - 0.864 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
4. PRKCE ENSGALG00000010000 99 1.713 - - 0.835 - - - 0.878 - - - protein kinase C epsilon, transcript variant X1
5. ZDHHC5 ENSGALG00000007362 296 1.663 - - - - 0.719 - 0.944 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
6. GALNT11 ENSGALG00000006233 210 1.617 - - 0.877 - 0.740 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
7. RIPK4 ENSGALG00000040189 102 1.611 - - 0.825 - - - 0.786 - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
8. ACSF3 ENSGALG00000035225 261 1.58 - - 0.827 - - - 0.753 - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
9. MKL2 186 1.576 - - - - - 0.710 0.866 - - - MKL1/myocardin like 2, transcript variant X4
10. FAM76B ENSGALG00000017202 688 1.546 - - 0.716 - - - 0.830 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
11. TBC1D5 ENSGALG00000011251 287 1.543 - - 0.756 - - - - 0.787 - - TBC1 domain family member 5 [Source:HGNC Symbol;Acc:HGNC:19166]
12. DENND6A ENSGALG00000005656 831 1.519 - - 0.730 - - - 0.789 - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
13. ANKRD12 ENSGALG00000008399 1724 1.49 - - - - 0.700 0.790 - - - - ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
14. RGS12 ENSGALG00000015626 280 1.448 - - 0.736 - - 0.712 - - - - regulator of G protein signaling 12 [Source:HGNC Symbol;Acc:HGNC:9994]
15. POFUT1 ENSGALG00000006594 367 0.992 - - - - - - 0.992 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
16. ANO3 ENSGALG00000013311 16 0.991 - - - - - - 0.991 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
17. C18H17ORF67 ENSGALG00000024428 10 0.991 - - - - - - 0.991 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
18. TEX2 ENSGALG00000003496 23 0.991 - - - - - - 0.991 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
19. DCBLD1 ENSGALG00000014907 19 0.991 - - - - - - 0.991 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
20. MUC5B MUC5B 62 0.991 - - - - - - 0.991 - - -
21. ENSGALG00000023475 ENSGALG00000023475 19 0.991 - - - - - - 0.991 - - -
22. NAPRT1 NAPRT1 227 0.987 - - - - - - 0.987 - - -
23. LAMP1 ENSGALG00000037697 247 0.986 - - - - - - 0.986 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
24. SVOPL ENSGALG00000012812 27 0.981 - - - - - - 0.981 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
25. MOCOS ENSGALG00000013149 25 0.979 - - - - - - 0.979 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
26. NKD1 ENSGALG00000003767 76 0.977 - - - - - - 0.977 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
27. RIPPLY2 ENSGALG00000015845 34 0.97 - - - - - - 0.970 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
28. ENSGALG00000029120 ENSGALG00000029120 73 0.97 - - - - - - 0.970 - - -
29. ENDOV 121 0.969 - - - - - - 0.969 - - - endonuclease V
30. C9orf171 C9orf171 35 0.968 - - - - - - 0.968 - - -
31. TSPAN14 ENSGALG00000002414 69 0.967 - - - - - - 0.967 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
32. KCTD5 ENSGALG00000006423 192 0.964 - - - - - - 0.964 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
33. FAM21A FAM21A 251 0.957 - - - - - - 0.957 - - -
34. MAP3K1 ENSGALG00000014718 60 0.956 - - - - - - 0.956 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
35. FAM82B FAM82B 374 0.954 - - - - - - 0.954 - - -
36. ENSGALG00000012463 ENSGALG00000012463 242 0.952 - - - - - - 0.952 - - -
37. HTR2C ENSGALG00000005853 90 0.952 - - - - - - 0.952 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
38. TDRD5 ENSGALG00000033634 40 0.948 - - - - - - 0.948 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
39. KYNU ENSGALG00000012418 353 0.946 - - - - - - 0.946 - - - kynureninase, transcript variant X3
40. TP53I3 ENSGALG00000016502 178 0.943 - - - - - - 0.943 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
41. PCGF2 ENSGALG00000018815 38 0.941 - - - - - - 0.941 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
42. NCOA6 ENSGALG00000001182 83 0.941 - - - - - - 0.941 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
43. AGL ENSGALG00000005407 93 0.938 - - - - - - 0.938 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
44. GRIA2 ENSGALG00000009405 275 0.937 - - - - - - 0.937 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
45. FBXL18 ENSGALG00000004611 97 0.936 - - - - - - 0.936 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
46. SNORD2 SNORD2 51 0.936 - - - - - - 0.936 - - -
47. LMCD1 ENSGALG00000008349 928 0.936 - - - - - - 0.936 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
48. LRRC2 ENSGALG00000013634 69 0.936 - - - - - - 0.936 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
49. CPNE7 ENSGALG00000000507 54 0.935 - - - - - - 0.935 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
50. YTHDC1 ENSGALG00000035906 471 0.935 - - - - - - 0.935 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
51. TSPAN4 ENSGALG00000006837 150 0.934 - - - - - - 0.934 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
52. RSFR 61 0.933 - - - - - - 0.933 - - - leukocyte ribonuclease A-2
53. FGB ENSGALG00000009262 1169 0.933 - - - - - - 0.933 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
54. ENSGALG00000001515 ENSGALG00000001515 833 0.932 - - - - - - 0.932 - - -
55. NPTN ENSGALG00000001741 481 0.93 - - - - - - 0.930 - - - neuroplastin [Source:NCBI gene;Acc:415316]
56. ARHGAP15 ENSGALG00000012421 58 0.93 - - - - - - 0.930 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
57. MLF1 ENSGALG00000009654 619 0.929 - - - - - - 0.929 - - - myeloid leukemia factor 1, transcript variant X3
58. ENSGALG00000014900 ENSGALG00000014900 335 0.927 - - - - - - 0.927 - - -
59. ENSGALG00000020753 ENSGALG00000020753 159 0.923 - - - - - - 0.923 - - -
60. LOC770996 ENSGALG00000016570 635 0.923 - - - - - - 0.923 - - - L-gulonolactone oxidase-like
61. ZNF148 ENSGALG00000012049 365 0.92 - - - - - - 0.920 - - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
62. KRT222 ENSGALG00000003859 53 0.92 - - - - - - 0.920 - - - keratin 222 [Source:NCBI gene;Acc:420046]
63. CPNE1 ENSGALG00000040856 610 0.919 - - - - - - 0.919 - - - copine 1 [Source:NCBI gene;Acc:419134]
64. APBA2 ENSGALG00000003930 408 0.919 - - - - - - 0.919 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
65. HOXCDX1L ENSGALG00000007656 53 0.917 - - - - - - 0.917 - - - homeobox protein CDX-1-like
66. PDE4D ENSGALG00000014727 53 0.917 - - - - - - 0.917 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
67. GHDC ENSGALG00000003333 178 0.915 - - - - - - 0.915 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
68. PCP4 ENSGALG00000022819 880 0.915 - - - - - - 0.915 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
69. LOC100857820 ENSGALG00000001824 16 0.915 - - - - - - 0.915 - - - uncharacterized LOC100857820
70. IFT27 ENSGALG00000042990 221 0.915 - - - - - - 0.915 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
71. ELK4 ENSGALG00000042137 69 0.911 - - - - - - 0.911 - - - ELK4, ETS transcription factor
72. KDM5A ENSGALG00000012986 624 0.91 - - - - - - 0.910 - - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
73. NSUN5 ENSGALG00000000891 1356 0.909 - - - - - - 0.909 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
74. RCL1 ENSGALG00000015024 133 0.907 - - - - - - 0.907 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
75. RAB8B ENSGALG00000003487 295 0.905 - - - - - - 0.905 - - - RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
76. PLCXD1 ENSGALG00000016721 289 0.903 - - - - - - 0.903 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
77. PRPF39 184 0.902 - - - - - - 0.902 - - - pre-mRNA processing factor 39, transcript variant X7
78. MKX ENSGALG00000007426 65 0.902 - - - - - - 0.902 - - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]
79. TBC1D8B ENSGALG00000009040 75 0.898 - - 0.898 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
80. ANKS1B ENSGALG00000011549 440 0.896 - - - - - - 0.896 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
81. CADM2 ENSGALG00000043393 810 0.888 - - - - - - 0.888 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
82. ENSGALG00000026371 ENSGALG00000026371 106 0.887 - - - - - - 0.887 - - -
83. FAM199X ENSGALG00000008872 44 0.886 - - 0.886 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
84. LCAT ENSGALG00000028928 484 0.885 - - - - - - 0.885 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
85. PYROXD1 ENSGALG00000013173 89 0.884 - - - - - - 0.884 - - - pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
86. BMP2K ENSGALG00000010885 37 0.883 - - 0.883 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
87. BBS12 142 0.882 - - - - - - 0.882 - - - Bardet-Biedl syndrome 12
88. HAUS8 ENSGALG00000003727 351 0.881 - - - - - - 0.881 - - - HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
89. PIP5K1C ENSGALG00000000784 492 0.881 - - 0.881 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
90. PARVA ENSGALG00000005438 91 0.881 - - - - - - 0.881 - - - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
91. PEAK1 ENSGALG00000002759 39 0.88 - - - - - 0.880 - - - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
92. ASB13 ENSGALG00000008401 181 0.88 - - - - - - 0.880 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
93. WDPCP ENSGALG00000008866 272 0.879 - - - - - - 0.879 - - - WD repeat containing planar cell polarity effector [Source:HGNC Symbol;Acc:HGNC:28027]
94. PRC1 ENSGALG00000012836 20 0.878 - - 0.878 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
95. RELN ENSGALG00000008193 43 0.877 - - - - - - 0.877 - - - reelin [Source:NCBI gene;Acc:427850]
96. FAM3B ENSGALG00000016140 111 0.877 - - 0.877 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
97. TRIM71 ENSGALG00000019622 1633 0.877 - - - - - - 0.877 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
98. HRSP12 HRSP12 1165 0.876 - - - - - - 0.876 - - -
99. LLGL1 ENSGALG00000014408 15 0.876 - - 0.876 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
100. FSCN2 ENSGALG00000023354 13 0.873 - - 0.873 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]

There are 301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA