Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VTI1A

Gene Name Gene ID Reads Annotation
VTI1A ENSGALG00000008880 279 vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]











Genes with expression patterns similar to VTI1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VTI1A ENSGALG00000008880 279 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
2. GAR1 ENSGALG00000020164 149 1.451 - - - - - 0.721 - - 0.730 - GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]
3. CGN ENSGALG00000000920 407 0.966 - - - - - - - - 0.966 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
4. AHSA2 1504 0.938 - - - - - - - - 0.938 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
5. ZNF608 ENSGALG00000005016 273 0.933 - - - - - - - - 0.933 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
6. ASNS ENSGALG00000009748 11822 0.928 - - - - - - - - 0.928 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
7. LEMD3 ENSGALG00000009873 347 0.924 - - - - - - - - 0.924 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
8. RGS8 ENSGALG00000026263 124 0.918 - - - - - 0.918 - - - - regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
9. DIAPH1 DIAPH1 357 0.916 - - - - - - - - 0.916 -
10. GPSM1 ENSGALG00000001797 943 0.916 - - - - - - - - 0.916 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
11. SLC7A6OS ENSGALG00000035575 2878 0.915 - - - - - - - - 0.915 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
12. ACL ACL 1813 0.913 - - - - - - - - 0.913 -
13. PJA2 ENSGALG00000000264 1574 0.912 - - - - - - - - 0.912 - praja ring finger ubiquitin ligase 2, transcript variant X1
14. UPB1 ENSGALG00000006627 139 0.909 - - - - - - - - 0.909 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
15. CTTN ENSGALG00000007700 709 0.907 - - - - - - - - 0.907 - cortactin [Source:NCBI gene;Acc:396455]
16. GALT ENSGALG00000026195 2002 0.903 - - - - - - - - 0.903 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
17. PPP1R13B ENSGALG00000011548 88 0.902 - - - - - - - - 0.902 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
18. REXO4 ENSGALG00000030609 2926 0.902 - - - - - - - - 0.902 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
19. PKP2 ENSGALG00000012913 2547 0.9 - - - - - - - - 0.900 - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
20. GSTA GSTA 3130 0.898 - - - - - - - - 0.898 -
21. gga-mir-1466 ENSGALG00000025170 487 0.897 - - - - - - - - 0.897 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
22. TTPA ENSGALG00000030031 500 0.893 - - - - - - - - 0.893 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
23. LAMA5 486 0.893 - - - - - - - - 0.893 - laminin subunit alpha 5, transcript variant X3
24. NUDT6 ENSGALG00000011834 1309 0.893 - - - - - - - - 0.893 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
25. VPS33A ENSGALG00000004440 2030 0.89 - - - - - - - - 0.890 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
26. ENSGALG00000014946 ENSGALG00000014946 40 0.887 - - - - - - - - 0.887 -
27. GNG11 ENSGALG00000029899 327 0.886 - - - - - - - - 0.886 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
28. CDERMO-1 CDERMO-1 279 0.886 - - - - - - - - 0.886 -
29. GGA.16412 GGA.16412 846 0.884 - - - - - - - - 0.884 -
30. TYSND1 ENSGALG00000033807 716 0.883 - - - - - - - - 0.883 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
31. TMEM69 ENSGALG00000010279 716 0.883 - - - - - - - - 0.883 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
32. RPS6KA5 ENSGALG00000030580 218 0.883 - - - - - - - - 0.883 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
33. SMPDL3B ENSGALG00000000737 223 0.882 - - - - - - - - 0.882 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
34. DDX28 ENSGALG00000003415 979 0.882 - - - - - - - - 0.882 - DEAD-box helicase 28
35. DYNLT3 ENSGALG00000016259 340 0.88 - - - - - - - - 0.880 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
36. BSDC1 ENSGALG00000003405 3701 0.879 - - - - - - - - 0.879 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
37. DLG3 ENSGALG00000041900 3016 0.879 - - - - - - - - 0.879 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
38. C6H10ORF46 C6H10ORF46 1107 0.879 - - - - - - - - 0.879 -
39. TIAR TIAR 2471 0.879 - - - - - - - - 0.879 -
40. RNASEH1 ENSGALG00000016389 2694 0.878 - - - - - - - - 0.878 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
41. ENSGALG00000008689 ENSGALG00000008689 232 0.877 - - - - - - - - 0.877 -
42. FAM221A ENSGALG00000010977 695 0.877 - - - - - - - - 0.877 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
43. CCDC104 CCDC104 6584 0.877 - - - - - - - - 0.877 -
44. DENND6A ENSGALG00000005656 831 0.876 - - - - - - - - 0.876 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
45. IPO8 ENSGALG00000012953 499 0.874 - - - - - - - - 0.874 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
46. TDRD7 ENSGALG00000012350 594 0.873 - - - - - - - - 0.873 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
47. C1GALT1 ENSGALG00000009752 7148 0.869 - - - - - - - - 0.869 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
48. CEP104 ENSGALG00000000978 1130 0.868 - - - - - - - - 0.868 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
49. SNW1 ENSGALG00000010501 17767 0.868 - - - - - - - - 0.868 - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
50. BRMS1L ENSGALG00000010093 4964 0.867 - - - - - - - - 0.867 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
51. TVP23A ENSGALG00000007216 275 0.866 - - - - - - - - 0.866 - trans-golgi network vesicle protein 23 homolog A [Source:HGNC Symbol;Acc:HGNC:20398]
52. TSC22D3 ENSGALG00000027069 1222 0.866 - - - - - - - - 0.866 - TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
53. PCDH20 ENSGALG00000016934 187 0.866 - - - - - - - - 0.866 - protocadherin 20
54. DARS ENSGALG00000012355 2887 0.865 - - - - - - - - 0.865 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
55. ENSGALG00000020497 ENSGALG00000020497 446 0.864 - - - - - - - - 0.864 -
56. FAM129A ENSGALG00000004812 269 0.863 - - - - - - - - 0.863 - family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
57. ARL14EP ENSGALG00000012139 4690 0.861 - - - - - - - - 0.861 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
58. TMEM177 ENSGALG00000011593 311 0.861 - - - - - - - - 0.861 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
59. KIAA1211 ENSGALG00000013771 135 0.86 - - - - - - - - 0.860 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
60. CCNY ENSGALG00000007076 3921 0.859 - - - - - - - - 0.859 - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
61. CEP70 ENSGALG00000012087 7992 0.858 - - - - - - - - 0.858 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
62. PSMG2 ENSGALG00000013863 351 0.856 - - - - - - - - 0.856 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
63. NCF1 ENSGALG00000001189 334 0.855 - - - - - - - - 0.855 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
64. ENSGALG00000019710 ENSGALG00000019710 212 0.854 - - - - - - - - 0.854 -
65. PIGB ENSGALG00000037734 2193 0.854 - - - - - - - - 0.854 - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
66. CCDC171 ENSGALG00000015103 349 0.854 - - - - - - - - 0.854 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
67. RREB1 ENSGALG00000012799 125 0.853 - - - - - - - - 0.853 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
68. CCDC103 CCDC103 362 0.853 - - - - - - - - 0.853 -
69. CLCN7 ENSGALG00000030826 3173 0.852 - - - - - - - - 0.852 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
70. TAPT1 ENSGALG00000014486 2022 0.851 - - - - - - - - 0.851 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
71. ANKRD54 ENSGALG00000012299 1588 0.85 - - - - - - - - 0.850 - ankyrin repeat domain 54, transcript variant X1
72. NCAPG ENSGALG00000014425 929 0.85 - - - - - - - - 0.850 - non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
73. SEP-05_15 SEP-05_15 568 0.849 - - - - - - - - 0.849 -
74. DTWD2 ENSGALG00000002250 1604 0.849 - - - - - - - - 0.849 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
75. ARHGEF4 ENSGALG00000002193 558 0.848 - - - - - - - - 0.848 - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
76. HSDL1 ENSGALG00000003273 1108 0.848 - - - - - - - - 0.848 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
77. PDCD4 ENSGALG00000008700 574 0.848 - - - - - - - - 0.848 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
78. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.847 - - - - - - - - 0.847 - notchless homolog 1, transcript variant X1
79. DSP ENSGALG00000012790 17884 0.846 - - - - - - - - 0.846 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
80. GMFB ENSGALG00000012208 894 0.845 - - - - - - - - 0.845 - glia maturation factor beta [Source:NCBI gene;Acc:423560]
81. FKBP8 ENSGALG00000003357 942 0.842 - - - - - - - - 0.842 - FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
82. TATDN3 ENSGALG00000009811 1851 0.842 - - - - - - - - 0.842 - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
83. COL6A2 ENSGALG00000039216 892 0.841 - - - - - - - - 0.841 - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
84. SGK1 ENSGALG00000013971 2608 0.841 - - - - - - - - 0.841 - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
85. PPFIA1 ENSGALG00000035774 5258 0.84 - - - - - - - - 0.840 - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
86. CARKD CARKD 2914 0.84 - - - - - - - - 0.840 -
87. PAAF1 ENSGALG00000017318 605 0.839 - - - - - - - - 0.839 - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]
88. PACRG ENSGALG00000011560 67 0.838 - - - - - - - - 0.838 - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
89. C13H5ORF41 C13H5ORF41 1051 0.837 - - - - - - - - 0.837 -
90. TULP3 ENSGALG00000013424 2064 0.835 - - - - - - - - 0.835 - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
91. HEBP1 ENSGALG00000011798, ENSGALG00000011799 2359 0.835 - - - - - - - - 0.835 - heme binding protein 1 [Source:NCBI gene;Acc:417961]
92. DDHD2 ENSGALG00000042181 421 0.832 - - - - - - - - 0.832 - DDHD domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29106]
93. COMTD1 ENSGALG00000005000 1248 0.831 - - - - - - - - 0.831 - catechol-O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26309]
94. EFTUD1 EFTUD1 3455 0.83 - - - - - - - - 0.830 -
95. WDFY1 ENSGALG00000005158 2512 0.83 - - - - - - - - 0.830 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
96. GEM ENSGALG00000032506 439 0.829 - - - - - - - - 0.829 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
97. PPIP5K2 ENSGALG00000015264 862 0.829 - - - - - - - - 0.829 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
98. TOX2 ENSGALG00000003106 2472 0.828 - - - - - - - - 0.828 - TOX high mobility group box family member 2, transcript variant X1
99. gga-mir-1725 gga-mir-1725 178 0.828 - - - - - - - - 0.828 -
100. ANGPT4 ENSGALG00000040755 489 0.828 - - - - - - - - 0.828 - angiopoietin 4 [Source:HGNC Symbol;Acc:HGNC:487]

There are 254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA