Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VTG1

Gene Name Gene ID Reads Annotation
VTG1 ENSGALG00000039354 17 vitellogenin 1 [Source:NCBI gene;Acc:424547]











Genes with expression patterns similar to VTG1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VTG1 ENSGALG00000039354 17 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
2. DDO ENSGALG00000015057 25 1.881 - - 0.881 - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
3. SDR42E2 ENSGALG00000006964 57 1.832 - - - - - 0.898 - - - 0.934 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
4. EPHA2 ENSGALG00000039895 12 1.816 - - 0.856 0.960 - - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
5. PTPRO ENSGALG00000013085 26 1.799 - - 0.829 0.970 - - - - - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
6. ZFYVE21 ENSGALG00000011534 7 1.721 - - 0.761 0.960 - - - - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
7. TMEM181 ENSGALG00000013737 19 1.712 - - - - - 1.000 0.712 - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
8. RALGPS1_1 ENSGALG00000000906 7 1.652 - - - 0.928 - 0.724 - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
9. TMEM72 ENSGALG00000026808 5 1.625 - - - - - - 0.712 - - 0.913 transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
10. LRRC1 ENSGALG00000016304 21 1.619 - - - - - 0.907 0.712 - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
11. ENSGALG00000025912 ENSGALG00000025912 4 1 - - - - - 1.000 - - - -
12. UPK3A ENSGALG00000014227 7 1 - - - - - - - - - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
13. CD40 ENSGALG00000007015 7 1 - - - - - - - - - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
14. ITGAV ENSGALG00000002655 26 1 - - - - - 1.000 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
15. SLC38A7 ENSGALG00000002313 25 1 - - - - - 1.000 - - - - solute carrier family 38 member 7, transcript variant X5
16. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
17. RAP2A ENSGALG00000016889 26 1 - - - - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
18. BAP1 ENSGALG00000004366 12 1 - - - - - 1.000 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
19. ANKFN1 ENSGALG00000003105 15 1 - - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
20. RAB4A ENSGALG00000036218 20 1 - - - - - 1.000 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
21. DPF3 ENSGALG00000009352 7 1 - - - - - 1.000 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
22. MCF2L2 ENSGALG00000008744 8 1 - - - - 1.000 - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
23. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
24. CREB3 ENSGALG00000002523 23 1 - - - - - 1.000 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
25. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
26. SLC51A ENSGALG00000007478 6 1 - - - - 1.000 - - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
27. TMC3 ENSGALG00000006376 12 1 - - - - - - - - - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
28. KLRD1 ENSGALG00000014722 27 1 - - - - 1.000 - - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
29. ENSGALG00000024381 ENSGALG00000024381 9 1 - - - - - - - - - 1.000
30. LRRC19 ENSGALG00000045028 2 1 - - - - 1.000 - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
31. CLDN15 ENSGALG00000038964 21 1 - - - - - - - - - 1.000 claudin 15, transcript variant X4
32. BCMO1 BCMO1 35 1 - - - - - 1.000 - - - -
33. ENSGALG00000025879 ENSGALG00000025879 3 1 - - - - - - - - - 1.000
34. CALML3 ENSGALG00000008424 88 1 - - - - - - - - - 1.000 calmodulin like 3 [Source:NCBI gene;Acc:416692]
35. ABI3BP ENSGALG00000015307 4 1 - - - - - 1.000 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
36. PEX26 ENSGALG00000019286 1 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
37. TMEM201 ENSGALG00000002527 2 1 - - - - - 1.000 - - - - transmembrane protein 201
38. ANKEF1 ENSGALG00000008996 12 1 - - - - 1.000 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
39. CAMK1 ENSGALG00000029912 6 1 - - - - - - - - - 1.000 calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
40. ENSGALG00000020320 ENSGALG00000020320 1 1 - - - - - 1.000 - - - -
41. COL19A1 ENSGALG00000043584 38 1 - - - - 1.000 - - - - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
42. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - - 1.000 - - - -
43. ENPP3 ENSGALG00000037587 25 1 - - - - - - - - - 1.000 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
44. CRTAC1 ENSGALG00000017378 15 1 - - - - 1.000 - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
45. OLIG3 ENSGALG00000013862 51 1 - - - - - 1.000 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
46. KCNQ3 ENSGALG00000037626 6 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
47. CLDN16 ENSGALG00000025821 14 1 - - - - 1.000 - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
48. IGHMBP2 ENSGALG00000004328 118 1 - - - - 1.000 - - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
49. PDCL2 ENSGALG00000013783 9 1 - - - - - - - - - 1.000 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
50. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - - - 1.000 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
51. KCNA4 ENSGALG00000012142 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
52. IL16 ENSGALG00000006388 3 1 - - - - - - - - - 1.000 interleukin 16 [Source:NCBI gene;Acc:374270]
53. GDA ENSGALG00000015141 21 1 - - - - - - - - - 1.000 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
54. FGF16 ENSGALG00000007806 8 1 - - - - - - - - - 1.000 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
55. ACPP ENSGALG00000043415 4 1 - - - - - 1.000 - - - - acid phosphatase, prostate, transcript variant X2
56. HOXA1 ENSGALG00000028095 137 1 - - - - - - - - - 1.000 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
57. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - - - 1.000
58. ENSGALG00000000443 ENSGALG00000000443 2 1 - - - - - - - - - 1.000
59. SMIM10 SMIM10 2 1 - - - - - 1.000 - - - -
60. CHRNA3 ENSGALG00000003014 6 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
61. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - 1.000 - - - -
62. SHANK2 ENSGALG00000035916 9 1 - - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
63. SRPX2 ENSGALG00000006796 32 1 - - - - - 1.000 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
64. CECR2 ENSGALG00000013034 12 1 - - - - - - - - - 1.000 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
65. TRPM3 ENSGALG00000015126 2 1 - - - - 1.000 - - - - - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
66. TRAF1 ENSGALG00000001583 3 1 - - - - - 1.000 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
67. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - - - - - 1.000
68. ABCB1LB ABCB1LB 4 1 - - - - - - - - - 1.000
69. VWA3B ENSGALG00000040709 5 1 - - - - - 1.000 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
70. MC4R ENSGALG00000012907 1 1 - - - - 1.000 - - - - - melanocortin 4 receptor [Source:NCBI gene;Acc:428485]
71. WNT3 ENSGALG00000001079 8 1 - - - - - 1.000 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
72. FARP2 ENSGALG00000005788 6 1 - - - - 1.000 - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
73. PDE1A ENSGALG00000008885 4 1 - - - - 1.000 - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
74. INHBB ENSGALG00000028770 2 1 - - - - - 1.000 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
75. LRRC47 7 1 - - - - - - - - - 1.000 leucine rich repeat containing 47
76. CLDN19 ENSGALG00000023580 1 1 - - - - - 1.000 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
77. Sep-03 Sep-03 109 0.995 - - - - - 0.995 - - - -
78. DCHS1 ENSGALG00000017334 12 0.992 - - - - - - - - - 0.992 dachsous cadherin-related 1, transcript variant X1
79. SCG5 ENSGALG00000009725 10 0.981 - - - - - 0.981 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
80. MFN2 ENSGALG00000004523 10 0.979 - - - - - - - - - 0.979 mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
81. MAPK10 ENSGALG00000011109 16 0.978 - - - - - 0.978 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
82. WNT6 ENSGALG00000011358 1886 0.974 - - - - - - - - - 0.974 Wnt family member 6 [Source:NCBI gene;Acc:395235]
83. SNORA74 SNORA74 8 0.971 - - - - - 0.971 - - - -
84. UNCX ENSGALG00000039292 165 0.971 - - - - - 0.971 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
85. STYK1 ENSGALG00000014759 3 0.971 - - - - - 0.971 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
86. FHAD1 ENSGALG00000034761 3 0.97 - - - - - 0.970 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
87. FAR1 ENSGALG00000005353 12 0.96 - - - 0.960 - - - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
88. ESR1 ENSGALG00000012973 3 0.96 - - - 0.960 - - - - - - estrogen receptor 1 [Source:NCBI gene;Acc:396099]
89. CLCN6 ENSGALG00000004590 3 0.96 - - - 0.960 - - - - - - chloride voltage-gated channel 6 [Source:NCBI gene;Acc:419488]
90. ENSGALG00000005960 ENSGALG00000005960 3 0.96 - - - 0.960 - - - - - -
91. ASPA ENSGALG00000004669 10 0.96 - - - 0.960 - - - - - - aspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]
92. ZNF330 ENSGALG00000009868 257 0.96 - - - 0.960 - - - - - - zinc finger protein 330 [Source:NCBI gene;Acc:422453]
93. SNORA44 SNORA44 29 0.96 - - - 0.960 - - - - - -
94. PSMD4 ENSGALG00000028505 16 0.96 - - - 0.960 - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
95. CER1 ENSGALG00000005434 3 0.957 - - 0.957 - - - - - - - cerberus 1, DAN family BMP antagonist [Source:NCBI gene;Acc:395623]
96. AK5 ENSGALG00000031652 12 0.957 - - 0.957 - - - - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
97. PCDH8 ENSGALG00000036258 1945 0.953 - - - - - 0.953 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
98. ITGA6 ENSGALG00000034007 53 0.952 - - - - - 0.952 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
99. CCDC6 ENSGALG00000003165 93 0.951 - - - - - 0.951 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
100. MAPKAPK3 ENSGALG00000002283 30 0.951 - - - 0.951 - - - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]

There are 313 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA