Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VSX1

Gene Name Gene ID Reads Annotation
VSX1 ENSG00000100987 43 visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]



Genes with expression patterns similar to VSX1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. VSX1 ENSG00000100987 43 2 1.000 1.000 visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]
2. SOX14 ENSG00000168875 15 0.818 - 0.818 SRY-box 14 [Source:HGNC Symbol;Acc:HGNC:11193]
3. SHOX2 ENSG00000168779 313 0.761 0.761 - short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]
4. PKD2L1 ENSG00000107593 8 0.753 - 0.753 polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]
5. NTRK3-AS1 ENSG00000260305 0 0.753 - 0.753 NTRK3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27532]
6. LOC102477328 2 0.753 - 0.753 uncharacterized LOC102477328
7. FGFBP2 ENSG00000137441 0 0.753 - 0.753 fibroblast growth factor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:29451]
8. SNORA11B ENSG00000221102 2 0.753 - 0.753 small nucleolar RNA, H/ACA box 11B [Source:HGNC Symbol;Acc:HGNC:33620]
9. LCE5A ENSG00000186207 0 0.753 - 0.753 late cornified envelope 5A [Source:HGNC Symbol;Acc:HGNC:16614]
10. GUCY1B2 ENSG00000123201 3 0.753 - 0.753 guanylate cyclase 1 soluble subunit beta 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4686]
11. C9orf57 ENSG00000204669 1 0.753 - 0.753 chromosome 9 open reading frame 57 [Source:HGNC Symbol;Acc:HGNC:27037]
12. SORCS3-AS1 ENSG00000226387 0 0.753 - 0.753 SORCS3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:45244]
13. LRRC52 ENSG00000162763 0 0.753 - 0.753 leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
14. C12orf80 ENSG00000257137 0 0.753 - 0.753 chromosome 12 open reading frame 80 [Source:HGNC Symbol;Acc:HGNC:27473]
15. PDCD1LG2 ENSG00000197646 0 0.753 - 0.753 programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]
16. GDF1 ENSG00000130283 0 0.753 - 0.753 growth differentiation factor 1 [Source:HGNC Symbol;Acc:HGNC:4214]
17. LIPH ENSG00000163898 3 0.753 - 0.753 lipase H [Source:HGNC Symbol;Acc:HGNC:18483]
18. CNPY1 ENSG00000146910 2 0.753 - 0.753 canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]
19. NEUROD1 ENSG00000162992 4578 0.74 0.740 - neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7762]
20. RTBDN ENSG00000132026 5 0.736 - 0.736 retbindin [Source:HGNC Symbol;Acc:HGNC:30310]
21. LOC101928295 2 0.732 - 0.732 uncharacterized LOC101928295
22. FLJ45079 17 0.729 - 0.729 FLJ45079 protein
23. TPBGL ENSG00000261594 26 0.719 0.719 - trophoblast glycoprotein like [Source:HGNC Symbol;Acc:HGNC:44159]
24. RGS11 ENSG00000076344 18 0.718 - 0.718 regulator of G protein signaling 11 [Source:HGNC Symbol;Acc:HGNC:9993]
25. PSTPIP1 ENSG00000140368 63 0.716 - 0.716 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
26. PPP1R17 ENSG00000106341 1811 0.711 0.711 - protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
27. RGS10 ENSG00000148908 1045 0.709 0.709 - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
28. LIPG ENSG00000101670 287 0.706 0.706 - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
29. RASD1 ENSG00000108551 302 0.705 0.705 - ras related dexamethasone induced 1 [Source:HGNC Symbol;Acc:HGNC:15828]
30. SYNPR ENSG00000163630 255 0.701 0.701 - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA