Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VSTM4

Gene Name Gene ID Reads Annotation
VSTM4 ENSGALG00000006174 98 V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]











Genes with expression patterns similar to VSTM4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VSTM4 ENSGALG00000006174 98 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]
2. ABI3BP ENSGALG00000015307 4 1.628 - - - - - 0.868 - 0.760 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
3. SCG5 ENSGALG00000009725 10 1.584 - - - - - 0.842 - - - 0.742 secretogranin V [Source:NCBI gene;Acc:769742]
4. ENSGALG00000026584 ENSGALG00000026584 77 0.902 - - - - - 0.902 - - - -
5. RHBDL3 ENSGALG00000003426 19 0.871 - - - - - 0.871 - - - - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
6. BCMO1 BCMO1 35 0.868 - - - - - 0.868 - - - -
7. SRPX2 ENSGALG00000006796 32 0.868 - - - - - 0.868 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
8. SHANK2 ENSGALG00000035916 9 0.868 - - - - - 0.868 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
9. TMEM201 ENSGALG00000002527 2 0.868 - - - - - 0.868 - - - - transmembrane protein 201
10. TRAF1 ENSGALG00000001583 3 0.868 - - - - - 0.868 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
11. PEX26 ENSGALG00000019286 1 0.868 - - - - - 0.868 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
12. ENSGALG00000020320 ENSGALG00000020320 1 0.868 - - - - - 0.868 - - - -
13. VWA3B ENSGALG00000040709 5 0.868 - - - - - 0.868 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
14. WNT3 ENSGALG00000001079 8 0.868 - - - - - 0.868 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
15. KCNQ3 ENSGALG00000037626 6 0.868 - - - - - 0.868 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
16. OLIG3 ENSGALG00000013862 51 0.868 - - - - - 0.868 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
17. CLDN19 ENSGALG00000023580 1 0.868 - - - - - 0.868 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
18. ENSGALG00000006495 ENSGALG00000006495 4 0.868 - - - - - 0.868 - - - -
19. INHBB ENSGALG00000028770 2 0.868 - - - - - 0.868 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
20. ITGAV ENSGALG00000002655 26 0.868 - - - - - 0.868 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
21. ENSGALG00000025912 ENSGALG00000025912 4 0.868 - - - - - 0.868 - - - -
22. RAB4A ENSGALG00000036218 20 0.868 - - - - - 0.868 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
23. ANKFN1 ENSGALG00000003105 15 0.868 - - - - - 0.868 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
24. TMEM181 ENSGALG00000013737 19 0.868 - - - - - 0.868 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
25. DPF3 ENSGALG00000009352 7 0.868 - - - - - 0.868 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
26. SLC38A7 ENSGALG00000002313 25 0.868 - - - - - 0.868 - - - - solute carrier family 38 member 7, transcript variant X5
27. BAP1 ENSGALG00000004366 12 0.868 - - - - - 0.868 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
28. VTG1 ENSGALG00000039354 17 0.868 - - - - - 0.868 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
29. CREB3 ENSGALG00000002523 23 0.868 - - - - - 0.868 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
30. ACPP ENSGALG00000043415 4 0.868 - - - - - 0.868 - - - - acid phosphatase, prostate, transcript variant X2
31. ENSGALG00000024369 ENSGALG00000024369 4 0.868 - - - - - 0.868 - - - -
32. SMIM10 SMIM10 2 0.868 - - - - - 0.868 - - - -
33. GDF10 ENSGALG00000005985 11 0.867 - - - - - 0.867 - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
34. PCDH8 ENSGALG00000036258 1945 0.867 - - - - - 0.867 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
35. TCTE1 ENSGALG00000010165 65 0.861 - - - - - 0.861 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
36. Sep-03 Sep-03 109 0.86 - - - - - 0.860 - - - -
37. UNCX ENSGALG00000039292 165 0.842 - - - - - 0.842 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
38. MAPK10 ENSGALG00000011109 16 0.841 - - - - - 0.841 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
39. ARSH ENSGALG00000016636 34 0.838 - - - - - - 0.838 - - - arylsulfatase family, member H [Source:NCBI gene;Acc:378798]
40. SNORA74 SNORA74 8 0.834 - - - - - 0.834 - - - -
41. STYK1 ENSGALG00000014759 3 0.834 - - - - - 0.834 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
42. FHAD1 ENSGALG00000034761 3 0.833 - - - - - 0.833 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
43. ITGA6 ENSGALG00000034007 53 0.83 - - - - - 0.830 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
44. CCDC6 ENSGALG00000003165 93 0.826 - - - - - 0.826 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
45. TFAP2C ENSGALG00000007690 768 0.825 - - - - - 0.825 - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
46. LRRC1 ENSGALG00000016304 21 0.818 - - - - - 0.818 - - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
47. LOC416622 ENSGALG00000007030 30 0.812 - - - - - - - - - 0.812 transmembrane protein 180-like, transcript variant X8
48. OXR1 44 0.808 - - - - - 0.808 - - - - oxidation resistance 1, transcript variant X7
49. PSEN1 ENSGALG00000009320 15 0.806 - - - - - 0.806 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
50. ENSGALG00000001004 ENSGALG00000001004 17 0.804 - - - - - - - 0.804 - -
51. TTC39B ENSGALG00000005416 12 0.801 - - - - - - - - - 0.801 tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
52. SNORD72 SNORD72 107 0.801 - - - - - - - 0.801 - -
53. CLEC18B ENSGALG00000027183 284 0.799 - - - - - 0.799 - - - - C-type lectin domain family 18 member B, transcript variant X2
54. SLC7A11 ENSGALG00000009758 104 0.798 - - - - - 0.798 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
55. MAK ENSGALG00000012770 32 0.796 - - - - - 0.796 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
56. PLCH2 ENSGALG00000001207 7 0.796 - - - - - 0.796 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
57. DACH2 ENSGALG00000006886 426 0.796 - - - - - 0.796 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]
58. DCLRE1B ENSGALG00000028626 48 0.784 - - - - - 0.784 - - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
59. PACRG ENSGALG00000011560 67 0.783 - - - - - 0.783 - - - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
60. BFSP1 ENSGALG00000008735 17 0.781 - - - - - 0.781 - - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
61. MGP ENSGALG00000011740 978 0.78 - - - - - - - - - 0.780 matrix Gla protein [Source:NCBI gene;Acc:395912]
62. FAM81A ENSGALG00000004103 8 0.774 - - - - - 0.774 - - - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
63. NKX2-1 ENSGALG00000037632 7 0.771 - - - - - 0.771 - - - - NK2 homeobox 1 [Source:NCBI gene;Acc:395322]
64. CACNG3 ENSGALG00000038087 12 0.77 - - - - - 0.770 - - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
65. ENSGALG00000002290 ENSGALG00000002290 6 0.769 - - - - - - - 0.769 - -
66. PER3 ENSGALG00000000573 590 0.766 - - - - - - - - - 0.766 period circadian clock 3 [Source:NCBI gene;Acc:419366]
67. SDR42E2 ENSGALG00000006964 57 0.764 - - - - - 0.764 - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
68. RASL11AL ENSGALG00000007710 88 0.763 - - - - - 0.763 - - - - ras-like protein family member 11A-like
69. ENSGALG00000023731 ENSGALG00000023731 149 0.761 - - - - - 0.761 - - - -
70. TEKT5 ENSGALG00000007257 5 0.76 - - - - - - - 0.760 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
71. RS1 ENSGALG00000016523 11 0.76 - - - - - - - 0.760 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
72. HAAO ENSGALG00000009926 6 0.76 - - - - - - - 0.760 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
73. TMEM207 ENSGALG00000026953 7 0.76 - - - - - - - 0.760 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
74. MMP9 ENSGALG00000006992 78 0.76 - - - - - - - 0.760 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
75. TNFRSF8 ENSGALG00000039741 6 0.76 - - - - - - - 0.760 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
76. HBEGF ENSGALG00000000949 15 0.76 - - - - - - - 0.760 - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
77. CLDN16 ENSGALG00000025821 14 0.76 - - - - - - - 0.760 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
78. ST8SIA1 ENSGALG00000013211 14 0.76 - - - - - - - 0.760 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
79. FK21 ENSGALG00000026348 11 0.76 - - - - - - - 0.760 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
80. DLK1 ENSGALG00000011244 5 0.76 - - - - - - - 0.760 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
81. FABP1 ENSGALG00000015937 12 0.76 - - - - - - - 0.760 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
82. CBFA2T2 ENSGALG00000003096 61 0.759 - - - - - - - 0.759 - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
83. LMOD3 ENSGALG00000018946 7 0.759 - - - - - - - 0.759 - - leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
84. MAPK11 ENSGALG00000040023 15 0.759 - - - - - - - 0.759 - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
85. ATRNL1 ENSGALG00000009152 646 0.758 - - - - - 0.758 - - - - attractin like 1 [Source:HGNC Symbol;Acc:HGNC:29063]
86. ENKD1 ENSGALG00000001204 362 0.756 - - - - 0.756 - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
87. CALB2 ENSGALG00000026903 32 0.756 - - - - - - - 0.756 - - calbindin 2 [Source:NCBI gene;Acc:396255]
88. FGF22 ENSGALG00000041822 37 0.756 - - - - - - - - - 0.756 fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
89. ABCA7 ENSGALG00000002453 22 0.755 - - - - - - - 0.755 - - ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
90. DNAJC6 ENSGALG00000011041 4 0.752 - - - - - 0.752 - - - - DnaJ heat shock protein family (Hsp40) member C6 [Source:NCBI gene;Acc:424698]
91. MLNR ENSGALG00000017003 10 0.752 - - - - - 0.752 - - - - motilin receptor [Source:NCBI gene;Acc:428072]
92. LCMT2 ENSGALG00000017333 207 0.751 - - - - - 0.751 - - - - leucine carboxyl methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:17558]
93. TSKU ENSGALG00000000761 10 0.748 - - - - - 0.748 - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
94. ANXA13 ENSGALG00000036418 5 0.747 - - - - - - - 0.747 - - annexin A13 [Source:NCBI gene;Acc:420342]
95. PROKR2 ENSGALG00000008741 72 0.747 - - - - - 0.747 - - - - prokineticin receptor 2 [Source:NCBI gene;Acc:421263]
96. MSX2 ENSGALG00000038848 6950 0.747 - - - - - 0.747 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
97. PTPRC ENSGALG00000002192 10 0.745 - - - - - - - - - 0.745 protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
98. CLEC16A ENSGALG00000007167 66 0.745 - - - - - - - - - 0.745 C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
99. CRK ENSGALG00000002656 15 0.744 - - - - - - - - - 0.744 CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
100. ACVR1C ENSGALG00000041257 37 0.744 - - - - - - - 0.744 - - activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]

There are 76 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA