Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VRK2

Gene Name Gene ID Reads Annotation
VRK2 ENSGALG00000032770 117 vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]











Genes with expression patterns similar to VRK2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VRK2 ENSGALG00000032770 117 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
2. FGD4 ENSGALG00000012932 50 1.938 - - - - - 0.938 1.000 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
3. SLC9A9 ENSGALG00000002374 179 1.625 - - - 0.728 - 0.897 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
4. ARHGEF18 ENSGALG00000003572 224 1.607 - - 0.906 - - - 0.701 - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
5. ENSGALG00000014545 ENSGALG00000014545 285 1.583 - - - 0.722 - 0.861 - - - -
6. FOXP1 127 1 - - - - - - 1.000 - - - forkhead box P1, transcript variant X14
7. COL4A3BP ENSGALG00000014952 96 1 - - - - - - 1.000 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
8. SNORD79 SNORD79 12 1 - - - - - - 1.000 - - -
9. FGF13 ENSGALG00000006508 8 1 - - - - - - 1.000 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
10. HPS3 ENSGALG00000040089 44 1 - - - - - - 1.000 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
11. CBLN4 ENSGALG00000030821 9 1 - - - - - - 1.000 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
12. LZTS2 ENSGALG00000023612 9 1 - - - - - - 1.000 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
13. P2RY13 ENSGALG00000039432 16 1 - - - - - - 1.000 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
14. SPERT ENSGALG00000016981 145 1 - - - - - - 1.000 - - - spermatid associated [Source:NCBI gene;Acc:418848]
15. POLR1A ENSGALG00000038160 236 1 - - - - - - 1.000 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
16. EGR4 ENSGALG00000016086 4 1 - - - - - - 1.000 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
17. MMP13 ENSGALG00000017183 7 1 - - - - - - 1.000 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
18. RD RD 99 1 - - - - - - 1.000 - - -
19. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - 1.000 - - -
20. KCNV1 ENSGALG00000031449 64 1 - - - - - - 1.000 - - - potassium voltage-gated channel modifier subfamily V member 1
21. GLRA2 ENSGALG00000016571 10 1 - - - - - - 1.000 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
22. DIRAS2 ENSGALG00000005323 11 1 - - - - - - 1.000 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
23. PLA2G1BL ENSGALG00000007236 4 1 - - - - - - 1.000 - - - phospholipase A2, major isoenzyme-like
24. FGA ENSGALG00000009266 291 1 - - - - - - 1.000 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
25. ADAM23 ENSGALG00000008582 28 1 - - - - - - 1.000 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
26. ENSGALG00000027367 ENSGALG00000027367 7 1 - - - - - - 1.000 - - -
27. TRIM25 ENSGALG00000003144 12 1 - - - - - - 1.000 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
28. LHX8 ENSGALG00000011369 77 1 - - - - - - 1.000 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
29. ST8SIA6 ENSGALG00000008671 8 1 - - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
30. ZBTB11 ENSGALG00000015334 22 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
31. LOC427545 ENSGALG00000004428 3 1 - - - - - - 1.000 - - - histamine H3 receptor-like
32. ABCC3 ENSGALG00000007522 340 0.941 - - - - - 0.941 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
33. GTF3C4 ENSGALG00000031016 1221 0.934 - - - - - 0.934 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
34. PON2 ENSGALG00000009689 1416 0.933 - - - - - 0.933 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
35. CLASP1 ENSGALG00000011645 1378 0.931 - - - - - 0.931 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
36. DSEL ENSGALG00000042505 92 0.93 - - - - - 0.930 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
37. PLXNC1 ENSGALG00000011309 69 0.928 - - - - - - 0.928 - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
38. GPD1L2 ENSGALG00000012061 31 0.927 - - - - - 0.927 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
39. CHST3 ENSGALG00000024056 308 0.926 - - - - - - 0.926 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
40. LOC419851 ENSGALG00000023953 80 0.925 - - - - - 0.925 - - - - complement component 4 binding protein, alpha chain
41. RAC3 ENSGALG00000040606 355 0.925 - - - - - 0.925 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
42. KIF7 ENSGALG00000006611 33 0.924 - - - - - 0.924 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
43. OLFML1 ENSGALG00000027184 19 0.924 - - - - - 0.924 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
44. SH2D1B ENSGALG00000028448 17 0.922 - - - - - 0.922 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
45. HJURP ENSGALG00000015363 54 0.921 - - - - - 0.921 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
46. AQP1 ENSGALG00000005209 111 0.92 - - - - - 0.920 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
47. DRD4 ENSGALG00000040761 79 0.92 - - - - - 0.920 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
48. C5H15ORF57 C5H15ORF57 4113 0.919 - - - - - 0.919 - - - -
49. C1orf168 C1orf168 98 0.917 - - - - - 0.917 - - - -
50. SERPINF2 ENSGALG00000002987 236 0.915 - - - - - 0.915 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
51. BLVRA ENSGALG00000031786 23 0.912 - - - - - 0.912 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
52. NIPAL4 ENSGALG00000039687 29 0.911 - - - - - 0.911 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
53. ENSGALG00000002946 ENSGALG00000002946 56 0.91 - - - - - 0.910 - - - -
54. LTC4SL ENSGALG00000011450 645 0.91 - - - - - 0.910 - - - - leukotriene C4 synthase-like, transcript variant X3
55. PACSIN2 ENSGALG00000014159 601 0.909 - - - - - 0.909 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
56. ENSGALG00000026461 ENSGALG00000026461 61 0.907 - - - - - 0.907 - - - -
57. JAKMIP2 ENSGALG00000007593 95 0.904 - - - - - 0.904 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
58. APLF ENSGALG00000008745 887 0.904 - - - - - 0.904 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
59. SCAF8 ENSGALG00000013635 421 0.903 - - - - - 0.903 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
60. TERF1 ENSGALG00000037453 4497 0.902 - - - - - 0.902 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
61. COBL ENSGALG00000013102 84 0.902 - - - - - 0.902 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
62. ADNP2 ENSGALG00000035669 318 0.901 - - - - - 0.901 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
63. SMOC2 ENSGALG00000011205 340 0.901 - - - - - 0.901 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
64. MCC ENSGALG00000000208 61 0.899 - - - - - 0.899 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
65. WHAMM ENSGALG00000006002 1678 0.899 - - - - - 0.899 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
66. TBC1D2B ENSGALG00000003322 54 0.898 - - - - - - 0.898 - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
67. GOLGA1 ENSGALG00000001025 334 0.894 - - - - - 0.894 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
68. POLB ENSGALG00000040828 7462 0.894 - - - - - 0.894 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
69. ELMSAN1 ENSGALG00000009282 79 0.892 - - - - - 0.892 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
70. TPCN3 ENSGALG00000008198 124 0.892 - - - - - 0.892 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
71. DMXL1 ENSGALG00000002227 88 0.89 - - - - - - 0.890 - - - Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
72. GPRC5B ENSGALG00000002028 28 0.888 - - - - - - 0.888 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
73. ACN9 ACN9 269 0.888 - - - - - 0.888 - - - -
74. OVCH2 ENSGALG00000005318 8 0.888 - - - - - - 0.888 - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
75. KLHL40 ENSGALG00000005292 61 0.888 - - - - - 0.888 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
76. SERPINB1 ENSGALG00000019555 29 0.886 - - - - - 0.886 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
77. FAM177A1 ENSGALG00000010046 4318 0.883 - - - - - 0.883 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
78. CHST13 ENSGALG00000029632 391 0.881 - - - - - 0.881 - - - - carbohydrate sulfotransferase 13 [Source:HGNC Symbol;Acc:HGNC:21755]
79. WARS ENSGALG00000011228 193 0.88 - - - - - 0.880 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
80. SPSB3 ENSGALG00000002285 1329 0.878 - - - - - 0.878 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
81. GYPC ENSGALG00000011566 99 0.878 - - - - - 0.878 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
82. TTC7A ENSGALG00000010020 793 0.876 - - - - - 0.876 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
83. PCSK5 ENSGALG00000033256 674 0.875 - - - - - 0.875 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
84. DBT ENSGALG00000005280 2893 0.875 - - - - - 0.875 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
85. LEMD3 ENSGALG00000009873 347 0.875 - - - - - 0.875 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
86. SULT6B1 ENSGALG00000046375 23 0.874 - - - - - - 0.874 - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
87. TNFAIP2 ENSGALG00000011446 32 0.873 - - - 0.873 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
88. PRUNE PRUNE 452 0.872 - - - - - 0.872 - - - -
89. LOC415478 ENSGALG00000021171 100 0.871 - - - - - 0.871 - - - - transmembrane protein 2-like, transcript variant X2
90. CRCP ENSGALG00000002587 8809 0.87 - - - - - 0.870 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
91. BET1 ENSGALG00000024485 2451 0.868 - - - - - 0.868 - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
92. DIAPH3 ENSGALG00000016937 1069 0.868 - - - - - 0.868 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
93. ENSGALG00000015793 ENSGALG00000015793 12 0.867 - - - - - - 0.867 - - -
94. ATG10 ENSGALG00000027714 1100 0.867 - - - - - 0.867 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
95. FGF7 ENSGALG00000028158 189 0.866 - - - - - 0.866 - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
96. MXRA5 ENSGALG00000016635 352 0.865 - - - - - 0.865 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
97. ENSGALG00000004127 ENSGALG00000004127 566 0.864 - - - - - 0.864 - - - -
98. BRAT1 ENSGALG00000004348 158 0.863 - - - - - 0.863 - - - - BRCA1 associated ATM activator 1, transcript variant X3
99. OSR1 ENSGALG00000016473 1202 0.862 - - - - - 0.862 - - - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
100. ACTN2 ENSGALG00000014463 1724 0.861 - - - - - 0.861 - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA