Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VRK1

Gene Name Gene ID Reads Annotation
VRK1 ENSGALG00000011116 4524 vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]











Genes with expression patterns similar to VRK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VRK1 ENSGALG00000011116 4524 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
2. MAK16 ENSGALG00000001663 7455 1.813 - - - - - - 0.831 0.982 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
3. DDHD1 ENSGALG00000012426 6068 1.723 - - - - - - 0.742 0.981 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
4. EED ENSGALG00000014060 6467 1.714 - - - - - - 0.731 0.983 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
5. SNCAIP ENSGALG00000005330 2425 1.709 - - - - - - - 0.975 0.734 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
6. ANKRD17 ENSGALG00000011642 3192 1.704 0.728 - - - - - - 0.976 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
7. LIN7C ENSGALG00000012170 5043 1.7 - - - - - - 0.718 0.982 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
8. ENSGALG00000026930 ENSGALG00000026930 681 1.685 - - - - - - 0.709 0.976 - -
9. QARS ENSGALG00000029980 4207 1.664 - - - - - - 0.701 0.963 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
10. SLC25A20 ENSGALG00000028227 7685 1.647 - - - - - - 0.766 0.881 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
11. IGF2BP2 ENSGALG00000033195 11421 1.64 - - - - - - 0.715 0.925 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
12. WASL ENSGALG00000008797 5729 1.569 - - - - - - 0.708 0.861 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
13. RBBP6 ENSGALG00000006043 9708 1.552 0.705 - - - - - - 0.847 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
14. ELOVL1 ENSGALG00000009988 4000 1.475 - - - - 0.739 - 0.736 - - - ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
15. TRIM71 ENSGALG00000019622 1633 1.461 0.713 - - - - - - - 0.748 - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
16. RRP1B ENSGALG00000035696 12309 1.461 - - - - - - 0.736 - 0.725 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
17. ENSGALG00000004132 ENSGALG00000004132 9287 1.447 0.703 - - - - - 0.744 - - -
18. HMGB1 ENSGALG00000042875 83509 1.432 0.726 - - - - 0.706 - - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
19. AKT1 ENSGALG00000011620 4089 1.406 - - - - - - 0.706 - 0.700 - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
20. H2AFY_1 ENSGALG00000040141 4895 0.989 - - - - - - - 0.989 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
21. ADD1 ENSGALG00000015664 6828 0.986 - - - - - - - 0.986 - - adducin 1 [Source:NCBI gene;Acc:422882]
22. RPAP1 ENSGALG00000008624 3522 0.985 - - - - - - - 0.985 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
23. KNOP1 ENSGALG00000002042 6251 0.985 - - - - - - - 0.985 - - lysine-rich nucleolar protein 1, transcript variant X1
24. KCTD9 ENSGALG00000000275 3455 0.983 - - - - - - - 0.983 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
25. MTRF1 ENSGALG00000016951 3983 0.983 - - - - - - - 0.983 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
26. KDM4B ENSGALG00000034592 6711 0.983 - - - - - - - 0.983 - - lysine demethylase 4B, transcript variant X8
27. PTPN11 ENSGALG00000004821 2658 0.982 - - - - - - - 0.982 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
28. RBM6 ENSGALG00000035578 1690 0.982 - - - - - - - 0.982 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
29. NAA50 ENSGALG00000033889 3551 0.981 - - - - - - - 0.981 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
30. PRORSD1P ENSGALG00000034854 2924 0.981 - - - - - - - 0.981 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
31. CMC1 ENSGALG00000025811 3939 0.981 - - - - - - - 0.981 - - C-X9-C motif containing 1
32. MB21D1 2460 0.98 - - - - - - - 0.980 - - Mab-21 domain containing 1
33. FAS ENSGALG00000006351 461 0.98 - - - - - - - 0.980 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
34. C3H2ORF43 C3H2ORF43 5628 0.98 - - - - - - - 0.980 - -
35. PGS1 ENSGALG00000007181 3187 0.98 - - - - - - - 0.980 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
36. FBXW8 ENSGALG00000008207 1639 0.979 - - - - - - - 0.979 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
37. DENND5B 4077 0.979 - - - - - - - 0.979 - - DENN domain containing 5B, transcript variant X1
38. FGFRL1 ENSGALG00000037525 1687 0.979 - - - - - - - 0.979 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
39. ACAP2 ENSGALG00000007040 4182 0.979 - - - - - - - 0.979 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
40. PPT1 ENSGALG00000003936 2540 0.978 - - - - - - - 0.978 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
41. RIOK1 ENSGALG00000012795 4658 0.978 - - - - - - - 0.978 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
42. TECPR2 ENSGALG00000011373 1063 0.978 - - - - - - - 0.978 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
43. gga-mir-1787 ENSGALG00000025542 1373 0.978 - - - - - - - 0.978 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
44. ADARB1 ENSGALG00000007527 2480 0.977 - - - - - - - 0.977 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
45. MED10 ENSGALG00000028336 9343 0.977 - - - - - - - 0.977 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
46. TMEM100 ENSGALG00000026465 1785 0.977 - - - - - - - 0.977 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
47. EPS15 ENSGALG00000010543 1598 0.977 - - - - - - - 0.977 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
48. VPS13B 2293 0.976 - - - - - - - 0.976 - - vacuolar protein sorting 13 homolog B
49. KIAA1432 KIAA1432 1792 0.976 - - - - - - - 0.976 - -
50. RHOT1 ENSGALG00000003397 5149 0.976 - - - - - - - 0.976 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
51. NFASC ENSGALG00000031776 4264 0.975 - - - - - - - 0.975 - - neurofascin [Source:NCBI gene;Acc:419824]
52. DOCK8 481 0.974 - - - - - - - 0.974 - - dedicator of cytokinesis 8, transcript variant X1
53. PAX-6 PAX-6 2650 0.974 - - - - - - - 0.974 - -
54. ZMYM4 ENSGALG00000002499 435 0.974 - - - - - - - 0.974 - - zinc finger MYM-type containing 4, transcript variant X1
55. OMA1 ENSGALG00000010861 3328 0.971 - - - - - - - 0.971 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
56. PACSIN3 ENSGALG00000008231 5423 0.961 - - - - - - - 0.961 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
57. SNAPC5 ENSGALG00000007695 4117 0.956 - - - - - - - 0.956 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
58. LMNB2 ENSGALG00000000470 4364 0.956 - - - - - - - 0.956 - - lamin B2 [Source:NCBI gene;Acc:396222]
59. FAM192A ENSGALG00000021473 10213 0.956 - - - - - - - 0.956 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
60. ACADSB ENSGALG00000041417 7710 0.955 - - - - - - - 0.955 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
61. KXD1 ENSGALG00000036736 3771 0.954 - - - - - - - 0.954 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
62. APIP ENSGALG00000031286 6838 0.953 - - - - - - - 0.953 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
63. CHN1 ENSGALG00000009293 6415 0.953 - - - - - - - 0.953 - - chimerin 1 [Source:NCBI gene;Acc:429021]
64. HDHD2 ENSGALG00000034801 6373 0.95 - - - - - - - 0.950 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
65. ERLIN1 ENSGALG00000003308 6427 0.95 - - - - - - - 0.950 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
66. LGALS1 ENSGALG00000012420 13993 0.948 - - - - - - - 0.948 - - galectin 1 [Source:NCBI gene;Acc:396491]
67. ATP8B1 ENSGALG00000030834 521 0.948 - - - - - - - 0.948 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
68. UFD1L 12964 0.948 - - - - - - - 0.948 - - ubiquitin fusion degradation 1 like (yeast)
69. MRPL48 ENSGALG00000017319 9773 0.946 - - - - - - - 0.946 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
70. FKBP15 ENSGALG00000008838 3677 0.945 - - - - - - - 0.945 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
71. RNF10 ENSGALG00000036417 8027 0.942 - - - - - - - 0.942 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
72. RBP5 ENSGALG00000014662 31268 0.939 - - - - - - - 0.939 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
73. WBP11 ENSGALG00000011745 11182 0.937 - - - - - - - 0.937 - - WW domain binding protein 11, transcript variant X1
74. RAB6A ENSGALG00000017320 10569 0.936 - - - - - - - 0.936 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
75. IPO9 ENSGALG00000000397 9263 0.933 - - - - - - - 0.933 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
76. NFI1 NFI1 6210 0.932 - - - - - - - 0.932 - -
77. STT3B ENSGALG00000011465 11939 0.929 - - - - - - - 0.929 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
78. VAPB ENSGALG00000007549 15511 0.907 - - - - - - - 0.907 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
79. TSSC4 ENSGALG00000006530 10413 0.9 - - - - - - - 0.900 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
80. TPRG1L ENSGALG00000001024 9809 0.897 - - - - - - - 0.897 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
81. ZNF276 ENSGALG00000000513 2410 0.88 - - - - - - - 0.880 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
82. TFAM ENSGALG00000002703 19330 0.87 - - - - - - - 0.870 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
83. LOC422426 ENSGALG00000009622 1470 0.858 - - - - - - - 0.858 - - uncharacterized LOC422426, transcript variant X2
84. LOC407092 ENSGALG00000013809 10706 0.857 - - - - - - - 0.857 - - AD012Z, transcript variant X5
85. RDX ENSGALG00000017153 6734 0.856 0.856 - - - - - - - - - radixin [Source:NCBI gene;Acc:395511]
86. AGO3 ENSGALG00000043711 5086 0.844 - - - - - - 0.844 - - - argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
87. PTTG1 17936 0.839 - - - - - - 0.839 - - - pituitary tumor-transforming 1, transcript variant X1
88. TOP3B ENSGALG00000030051 5953 0.839 - - - - - - - 0.839 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
89. UHRF2 ENSGALG00000015052 1268 0.833 - - - - - - - - 0.833 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
90. CPSF2 ENSGALG00000010783 5236 0.832 - - - - - - - 0.832 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
91. MTCH2 ENSGALG00000036196 15097 0.832 - - - - - - - 0.832 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
92. SMAD1 ENSGALG00000009977 3540 0.832 - - - - - - 0.832 - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
93. SYAP1 ENSGALG00000016548 3347 0.832 - - - - - - 0.832 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
94. TMEM18 ENSGALG00000028744 11779 0.831 - - - - - - - 0.831 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
95. RAB21 ENSGALG00000010183 7718 0.83 - - - - - - 0.830 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
96. DENR ENSGALG00000003795 30805 0.829 - - - - - - - 0.829 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
97. DCAF7 ENSGALG00000000510 8681 0.826 - - - - - - 0.826 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
98. ITGB5 ENSGALG00000029766 5978 0.826 - - - - - - - 0.826 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
99. CRMP1B CRMP1B 18633 0.82 - - - - - - - 0.820 - -
100. MESDC1 1013 0.819 - - - - - - - 0.819 - - mesoderm development candidate 1

There are 420 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA