Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS9D1

Gene Name Gene ID Reads Annotation
VPS9D1 ENSGALG00000023468 1 VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]











Genes with expression patterns similar to VPS9D1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS9D1 ENSGALG00000023468 1 2 - - 1.000 - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
2. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
3. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
4. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
5. ZBTB40 ENSGALG00000004781 1 1 - - 1.000 - - - - - - - zinc finger and BTB domain containing 40 [Source:HGNC Symbol;Acc:HGNC:29045]
6. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
7. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
8. ENSGALG00000027487 ENSGALG00000027487 5 1 - - 1.000 - - - - - - -
9. ENSGALG00000028177 ENSGALG00000028177 1 1 - - 1.000 - - - - - - -
10. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
11. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
12. TMED6 ENSGALG00000000654 8 1 - - 1.000 - - - - - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
13. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
14. PIGR ENSGALG00000000919 3 1 - - 1.000 - - - - - - - polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
15. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
16. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
17. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
18. ENSGALG00000005939 ENSGALG00000005939 1 1 - - 1.000 - - - - - - -
19. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
20. PALM ENSGALG00000026055 8 1 - - 1.000 - - - - - - - paralemmin [Source:NCBI gene;Acc:101750199]
21. GSC ENSGALG00000010974 7 1 - - 1.000 - - - - - - - goosecoid homeobox [Source:NCBI gene;Acc:396273]
22. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
23. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
24. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
25. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
26. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
27. DAPK2 ENSGALG00000003336 3 1 - - 1.000 - - - - - - - death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
28. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
29. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
30. ENSGALG00000012389 ENSGALG00000012389 6 1 - - 1.000 - - - - - - -
31. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
32. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
33. FRY ENSGALG00000017075 8 1 - - 1.000 - - - - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
34. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
35. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
36. ENSGALG00000026155 ENSGALG00000026155 49 1 - - 1.000 - - - - - - -
37. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
38. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
39. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
40. TOM1L1 ENSGALG00000003011 1 1 - - 1.000 - - - - - - - target of myb1 like 1 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11983]
41. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
42. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
43. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
44. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
45. C11orf49 ENSGALG00000008255 36 1 - - 1.000 - - - - - - - chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
46. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
47. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
48. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
49. WWTR1 ENSGALG00000010412 5 1 - - 1.000 - - - - - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
50. PSEN2 ENSGALG00000009073 7 1 - - - - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
51. Mar-11 Mar-11 16 1 - - 1.000 - - - - - - -
52. KIAA1199 KIAA1199 6 1 - - 1.000 - - - - - - -
53. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
54. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
55. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
56. TPCN1 ENSGALG00000008357 28 1 - - 1.000 - - - - - - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
57. FAM110B ENSGALG00000035065 1 1 - - 1.000 - - - - - - - family with sequence similarity 110 member B [Source:HGNC Symbol;Acc:HGNC:28587]
58. 5S 5S 0 1 - - - - - 1.000 - - - -
59. OLFM4 ENSGALG00000016943 7 1 - - 1.000 - - - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
60. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
61. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
62. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
63. ASPR ASPR 1 1 - - - - - 1.000 - - - -
64. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
65. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
66. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
67. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
68. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
69. ENSGALG00000024397 ENSGALG00000024397 2 1 - - 1.000 - - - - - - -
70. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
71. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
72. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
73. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
74. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
75. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
76. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
77. ENSGALG00000013164 ENSGALG00000013164 3 1 - - 1.000 - - - - - - -
78. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
79. CHAT ENSGALG00000002289 26 1 - - - - - 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
80. TDRKH ENSGALG00000031812 1 1 - - 1.000 - - - - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
81. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
82. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
83. TRPV6 ENSGALG00000014746 3 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
84. SNTG2 ENSGALG00000016367 42 1 - - 1.000 - - - - - - - syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
85. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
86. ENSGALG00000023638 ENSGALG00000023638 16 1 - - - - - 1.000 - - - -
87. SAMD8 ENSGALG00000005004 2 1 - - 1.000 - - - - - - - sterile alpha motif domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26320]
88. SLC25A42 ENSGALG00000002621 6 0.977 - - - - - 0.977 - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
89. AIFM3 ENSGALG00000007720 28 0.944 - - 0.944 - - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
90. MICALL2 ENSGALG00000004070 23 0.938 - - - - - 0.938 - - - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
91. ENTPD5 ENSGALG00000010202 69 0.938 - - - - - 0.938 - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
92. CCDC96 9 0.938 - - - - - 0.938 - - - - coiled-coil domain containing 96
93. LNP1 ENSGALG00000015287 14 0.938 - - - - - 0.938 - - - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
94. CBLN1 ENSGALG00000042664 15 0.937 - - 0.937 - - - - - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
95. MYL3 ENSGALG00000005448 3379 0.929 - - - - - 0.929 - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
96. TMEM114 ENSGALG00000039005 13 0.921 - - - - - 0.921 - - - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
97. PHYKPL ENSGALG00000023920 6 0.896 - - 0.896 - - - - - - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
98. PELI2 ENSGALG00000012124 7 0.892 - - - - - 0.892 - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
99. TNFRSF18 ENSGALG00000001882 12 0.892 - - - - - 0.892 - - - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
100. TAL2 ENSGALG00000023114 17 0.882 - - - - - 0.882 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA