Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS4B

Gene Name Gene ID Reads Annotation
VPS4B ENSGALG00000012879 6720 vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]











Genes with expression patterns similar to VPS4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS4B ENSGALG00000012879 6720 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
2. CHDZ CHDZ 10381 1.683 - - - - - - 0.884 0.799 - -
3. FBXO45 ENSGALG00000037281 3936 1.657 - - 0.735 - - - 0.922 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
4. CCDC43 ENSGALG00000001022 5462 1.648 - - - - - - 0.929 0.719 - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
5. METTL16 ENSGALG00000014901 3720 1.647 - - 0.731 - - - 0.916 - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
6. PEMT ENSGALG00000004875 4094 1.641 - - 0.752 - - - 0.889 - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
7. BBX ENSGALG00000015353 1281 1.64 - - 0.724 - - - 0.916 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
8. AASDHPPT ENSGALG00000027981 1017 1.633 - - 0.710 - - - 0.923 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
9. VTA1 ENSGALG00000013810 4998 1.631 - - 0.708 - - - 0.923 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
10. CHCHD4 ENSGALG00000006328 5860 1.629 - - - - - - 0.829 0.800 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
11. IPO11 ENSGALG00000014740 4922 1.625 - - - - - - 0.905 0.720 - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
12. C1H21ORF91 ENSGALG00000028290 5550 1.607 - - - - - - 0.875 0.732 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
13. DLC1 ENSGALG00000013715 5297 1.596 - - 0.713 - - - 0.883 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
14. TRAF3IP1 ENSGALG00000004236 7094 1.574 - - - - - - 0.837 0.737 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
15. NCBP2_1 ENSGALG00000006843 7170 1.563 - - - - - - 0.832 0.731 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
16. EMC3 ENSGALG00000003738 10363 1.535 - - - - - - 0.805 0.730 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
17. MRPS33 ENSGALG00000028879 17966 1.517 - - 0.722 - - - 0.795 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
18. DAK DAK 13208 1.506 - - 0.718 - - - 0.788 - - -
19. HCCS ENSGALG00000005571 4939 1.439 - - 0.732 - - - - 0.707 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
20. ALG6 ENSGALG00000010991 3258 0.971 - - - - - - 0.971 - - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
21. ATP6V0B ENSGALG00000010091 14901 0.969 - - - - - - 0.969 - - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
22. DCK ENSGALG00000028501 8675 0.969 - - - - - - 0.969 - - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
23. PHKG1 ENSGALG00000002485 15214 0.964 - - - - - - 0.964 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
24. AKAP9 ENSGALG00000040724 7446 0.963 - - - - - - 0.963 - - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
25. DNMT3A ENSGALG00000041454 9607 0.959 - - - - - - 0.959 - - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
26. ZYG11B ENSGALG00000010643 2555 0.959 - - - - - - 0.959 - - - zyg-11 family member B, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:25820]
27. LGMN ENSGALG00000010811 7401 0.952 - - - - - - 0.952 - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
28. CUEDC2 ENSGALG00000005687 8162 0.951 - - - - - - 0.951 - - - CUE domain containing 2 [Source:NCBI gene;Acc:423761]
29. ATP6V1D ENSGALG00000009570 9827 0.947 - - - - - - 0.947 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
30. FUT8 ENSGALG00000036443 5589 0.947 - - - - - - 0.947 - - - fucosyltransferase 8 [Source:NCBI gene;Acc:423178]
31. NDP ENSGALG00000016222 1067 0.944 - - - - - - 0.944 - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
32. MFAP3 ENSGALG00000004040 6951 0.939 - - - - - - 0.939 - - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
33. NDUFV1 ENSGALG00000042809 6222 0.936 - - - - - - 0.936 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
34. VWA9 ENSGALG00000007491 4790 0.935 - - - - - - 0.935 - - - von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
35. PEX3 ENSGALG00000013777 3158 0.932 - - - - - - 0.932 - - - peroxisomal biogenesis factor 3
36. BTBD9 ENSGALG00000010131 1870 0.932 - - - - - - 0.932 - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
37. GKAP1 ENSGALG00000012586 2908 0.931 - - - - - - 0.931 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
38. PTCHD1 ENSGALG00000016358 3882 0.931 - - - - - - 0.931 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
39. TCF25 ENSGALG00000000129 7587 0.929 - - - - - - 0.929 - - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
40. GPATCH2 ENSGALG00000009627 4061 0.929 - - - - - - 0.929 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
41. FUBP3 ENSGALG00000003941 12667 0.928 - - - - - - 0.928 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
42. NDUFS3 ENSGALG00000008084 12471 0.928 - - - - - - 0.928 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
43. MRPL18 ENSGALG00000011625 7855 0.928 - - - - - - 0.928 - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
44. GTF2A1 ENSGALG00000010576 4570 0.928 - - - - - - 0.928 - - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
45. NFASC ENSGALG00000031776 4264 0.927 - - - - - - 0.927 - - - neurofascin [Source:NCBI gene;Acc:419824]
46. SPR ENSGALG00000000067 3456 0.927 - - - - - - 0.927 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
47. BOD1L1 ENSGALG00000026470 9250 0.927 - - - - - - 0.927 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
48. EDEM2 ENSGALG00000003128 3338 0.927 - - - - - - 0.927 - - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
49. SKA3 ENSGALG00000017128 4176 0.927 - - - - - - 0.927 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
50. STOML2 STOML2 15566 0.927 - - - - - - 0.927 - - -
51. ENSGALG00000026460 ENSGALG00000026460 607 0.927 - - - - - - 0.927 - - -
52. LRIG2 ENSGALG00000001733 2980 0.926 - - - - - - 0.926 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
53. ZFX ENSGALG00000016327 5470 0.926 - - - - - - 0.926 - - - zinc finger protein, X-linked, transcript variant X4
54. CDK5RAP2 ENSGALG00000041102 4042 0.926 - - - - - - 0.926 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
55. MORC2 2505 0.925 - - - - - - 0.925 - - - MORC family CW-type zinc finger 2, transcript variant X2
56. MKI67 ENSGALG00000025996 28136 0.925 - - - - - - 0.925 - - - marker of proliferation Ki-67, transcript variant X3
57. FNTA ENSGALG00000015397 3741 0.925 - - - - - - 0.925 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
58. SLC35B1 ENSGALG00000035057 10683 0.925 - - - - - - 0.925 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
59. C18H17ORF106 C18H17ORF106 2355 0.925 - - - - - - 0.925 - - -
60. SCYL3 ENSGALG00000036264 2935 0.925 - - - - - - 0.925 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
61. JUP ENSGALG00000017414 6920 0.924 - - - - - - 0.924 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
62. UBE2K ENSGALG00000014290 2138 0.924 - - - - - - 0.924 - - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
63. GPATCH1 ENSGALG00000004839 6455 0.924 - - - - - - 0.924 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
64. PISD ENSGALG00000006872 3539 0.924 - - - - - - 0.924 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
65. NFYA ENSGALG00000003247 1894 0.923 - - - - - - 0.923 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
66. WDR77 ENSGALG00000040864 3766 0.923 - - - - - - 0.923 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
67. MTRF1L ENSGALG00000013609 1581 0.923 - - - - - - 0.923 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
68. CWF19L2 ENSGALG00000017171 4590 0.923 - - - - - - 0.923 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
69. CHCHD10 ENSGALG00000028810 10389 0.923 - - - - - - 0.923 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
70. SLC52A3 ENSGALG00000006194 3952 0.923 - - - - - - 0.923 - - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
71. ACAT2 ENSGALG00000011659 12825 0.923 - - - - - - 0.923 - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
72. DDX54 ENSGALG00000007490 8729 0.922 - - - - - - 0.922 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
73. SETD7 ENSGALG00000009800 1230 0.922 - - - - - - 0.922 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
74. ENSGALG00000006671 ENSGALG00000006671 4194 0.922 - - - - - - 0.922 - - -
75. WBP4 ENSGALG00000016949 5858 0.922 - - - - - - 0.922 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
76. HS2ST1 ENSGALG00000028423 4153 0.922 - - - - - - 0.922 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
77. TSTA3 ENSGALG00000031525 3391 0.922 - - - - - - 0.922 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
78. BYSL ENSGALG00000003467 7555 0.922 - - - - - - 0.922 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
79. ORC5 ENSGALG00000008175 3426 0.921 - - - - - - 0.921 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
80. TBC1D19 ENSGALG00000029673 1868 0.921 - - - - - - 0.921 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
81. GEMIN5 ENSGALG00000003937 1685 0.92 - - - - - - 0.920 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
82. TAOK3 ENSGALG00000007396 3094 0.92 - - - - - - 0.920 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
83. MNAT1 ENSGALG00000011910 6809 0.92 - - - - - - 0.920 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
84. PXMP4 ENSGALG00000003042 1035 0.92 - - - - - - 0.920 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
85. XPC ENSGALG00000006357 2484 0.919 - - - - - - 0.919 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
86. UTP18 ENSGALG00000002985 7129 0.919 - - - - - - 0.919 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
87. ACOT7 ENSGALG00000000652 7976 0.919 - - - - - - 0.919 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
88. KDELR3 ENSGALG00000032313 4376 0.919 - - - - - - 0.919 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
89. BECN1 ENSGALG00000002973 1569 0.919 - - - - - - 0.919 - - - beclin 1 [Source:NCBI gene;Acc:420018]
90. ACTL6A ENSGALG00000009061 13013 0.919 - - - - - - 0.919 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
91. HDHD3 ENSGALG00000044101 6333 0.919 - - - - - - 0.919 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
92. INPP5A ENSGALG00000010493 6769 0.919 - - - - - - 0.919 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
93. GINS1 ENSGALG00000008538 4786 0.919 - - - - - - 0.919 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
94. NELL2 ENSGALG00000009601 4243 0.919 - - - - - - 0.919 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
95. FAIM ENSGALG00000012082 1209 0.918 - - - - - - 0.918 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
96. EFCAB10 ENSGALG00000045949 514 0.918 - - - - - - 0.918 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
97. CKLF ENSGALG00000005254 3365 0.918 - - - - - - 0.918 - - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
98. F2RL1 ENSGALG00000014984 565 0.918 - - - - - - 0.918 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
99. ANXA6 ENSGALG00000004357 2891 0.918 - - - - - - 0.918 - - - annexin A6 [Source:NCBI gene;Acc:395481]
100. EPS8 295 0.917 - - - - - - 0.917 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4

There are 411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA