Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS41

Gene Name Gene ID Reads Annotation
VPS41 ENSGALG00000031635 4391 VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]











Genes with expression patterns similar to VPS41

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS41 ENSGALG00000031635 4391 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
2. SSR1 ENSGALG00000012798 62626 1.741 - - - - - - 0.996 0.745 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
3. EIF5B ENSGALG00000016764 30681 1.737 - - - - - - 0.998 0.739 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
4. POGZ ENSGALG00000036365 4056 1 - - - - - - 1.000 - - - pogo transposable element with ZNF domain, transcript variant X2
5. HOXB3 ENSGALG00000043219 5198 1 - - - - - - 1.000 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
6. C-MET C-MET 1650 1 - - - - - - 1.000 - - -
7. TRIM37 ENSGALG00000005084 4036 1 - - - - - - 1.000 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
8. ZCCHC17 ENSGALG00000000618 5163 1 - - - - - - 1.000 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
9. RARRES2 ENSGALG00000042642 3043 1 - - - - - - 1.000 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
10. FAAH ENSGALG00000010433 3309 1 - - - - - - 1.000 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
11. SLC9A3R2 ENSGALG00000005608 4220 0.999 - - - - - - 0.999 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
12. WDR33 ENSGALG00000002043 6340 0.999 - - - - - - 0.999 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
13. CCDC47 ENSGALG00000000564 6584 0.999 - - - - - - 0.999 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
14. CASC4 ENSGALG00000008208 8338 0.999 - - - - - - 0.999 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
15. USP34 ENSGALG00000004455 6667 0.999 - - - - - - 0.999 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
16. FAM206A ENSGALG00000019524 7170 0.999 - - - - - - 0.999 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
17. GTF2I ENSGALG00000021665 6812 0.999 - - - - - - 0.999 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
18. SH2D3C ENSGALG00000005036 5101 0.999 - - - - - - 0.999 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
19. PPP1CB ENSGALG00000010026 6909 0.998 - - - - - - 0.998 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
20. TLE4 TLE4 7278 0.998 - - - - - - 0.998 - - -
21. SAMM50 ENSGALG00000014194 20437 0.998 - - - - - - 0.998 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
22. SF3A1 ENSGALG00000007937 11716 0.998 - - - - - - 0.998 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
23. GAS41 GAS41 9941 0.997 - - - - - - 0.997 - - -
24. STT3B ENSGALG00000011465 11939 0.997 - - - - - - 0.997 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
25. TMEM9B ENSGALG00000005908 14074 0.996 - - - - - - 0.996 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
26. PCNA ENSGALG00000029292 19163 0.995 - - - - - - 0.995 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
27. NSF ENSGALG00000001055 7399 0.994 - - - - - - 0.994 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
28. FKBP9 ENSGALG00000037669 12079 0.994 - - - - - - 0.994 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
29. BID ENSGALG00000013039 12427 0.993 - - - - - - 0.993 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
30. BTG1 ENSGALG00000011276 17496 0.992 - - - - - - 0.992 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
31. MTF2 ENSGALG00000043087 15225 0.991 - - - - - - 0.991 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
32. PPP1R8 ENSGALG00000000729 11797 0.989 - - - - - - 0.989 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
33. NAA15 ENSGALG00000009782 18563 0.987 - - - - - - 0.987 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
34. STK3 ENSGALG00000032850 6339 0.985 - - - - - - 0.985 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
35. FANCC ENSGALG00000012618 7002 0.985 - - - - - - 0.985 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
36. GFPT1 ENSGALG00000036391 14025 0.985 - - - - - - 0.985 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
37. OLFML3 ENSGALG00000001956 28633 0.985 - - - - - - 0.985 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
38. LPHN2 LPHN2 16507 0.976 - - - - - - 0.976 - - -
39. LARS ENSGALG00000007494 13966 0.976 - - - - - - 0.976 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
40. NOL9 ENSGALG00000028958 23978 0.967 - - - - - - 0.967 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
41. SRSF7 ENSGALG00000033120 43444 0.956 - - - - - - 0.956 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
42. PKM ENSGALG00000001992 93960 0.927 - - - - - - 0.927 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
43. SYNCRIP ENSGALG00000015830 30555 0.919 - - - - - - 0.919 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
44. ACTG1 ENSGALG00000001381 63905 0.909 - - - - - - 0.909 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
45. SFSWAP ENSGALG00000002487 9977 0.882 - - - - - - 0.882 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
46. GNB2L1 ENSGALG00000000122 194871 0.881 - - - - - - 0.881 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
47. NDUFS4 ENSGALG00000028026 25876 0.87 - - - - - - 0.870 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
48. EEF1D 153795 0.85 - - - - - - 0.850 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
49. GRAMD4 ENSGALG00000034274 3826 0.822 - - - - - - - 0.822 - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
50. RPS8 ENSGALG00000010124 363516 0.814 - - - - - - 0.814 - - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
51. SETD3 ENSGALG00000034802 4125 0.806 - - - - - - - 0.806 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
52. IARS ENSGALG00000004813 12936 0.798 - - - - - - - 0.798 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
53. DSCR3 3583 0.796 - - - - - - - 0.796 - - DSCR3 arrestin fold containing, transcript variant X1
54. ROCK1 ENSGALG00000014922 4020 0.796 - - - - - - - 0.796 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
55. CCND1 ENSGALG00000007555 6715 0.795 - - - - - - - 0.795 - - cyclin D1 [Source:NCBI gene;Acc:396341]
56. GBE1 ENSGALG00000042771 2323 0.79 - - - - - - - 0.790 - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
57. CCNDBP1 ENSGALG00000004837 11520 0.787 - - - - - - - 0.787 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
58. SPCS1 ENSGALG00000001655 7718 0.781 - - - - - - - 0.781 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
59. SCAPER ENSGALG00000002883 2087 0.781 - - - - - - - 0.781 - - S-phase cyclin A associated protein in the ER [Source:HGNC Symbol;Acc:HGNC:13081]
60. CHCHD4 ENSGALG00000006328 5860 0.778 - - - - - - - 0.778 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
61. DAD1 ENSGALG00000035626 32604 0.777 - - - - - - - 0.777 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
62. ELF1 ENSGALG00000016947 2769 0.775 - - - - - - - 0.775 - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
63. CCNC ENSGALG00000015471 6497 0.767 - - - - - - - 0.767 - - cyclin C [Source:NCBI gene;Acc:421791]
64. PCNT ENSGALG00000007021 6428 0.767 - - - - - - - 0.767 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
65. ENSGALG00000001861 ENSGALG00000001861 10150 0.767 - - - - - - - 0.767 - -
66. ATP8B4 ENSGALG00000002326 456 0.764 - - - - - - - - 0.764 - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
67. SMG1 ENSGALG00000006829 1875 0.763 - - - - - - - 0.763 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
68. C11H16ORF80 C11H16ORF80 18673 0.762 - - - - - - - 0.762 - -
69. EBAG9 ENSGALG00000036293 10058 0.761 - - - - - - - 0.761 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
70. TMEM141 ENSGALG00000041390 8871 0.76 - - - - - - - 0.760 - - transmembrane protein 141 [Source:NCBI gene;Acc:417294]
71. MSH6 ENSGALG00000008957 6396 0.758 - - - - - - - 0.758 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
72. MRPL41 ENSGALG00000008746 3833 0.757 - - - - - - - 0.757 - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
73. TLK1 ENSGALG00000009569 5446 0.757 - - - - - - - 0.757 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
74. ENSGALG00000009044 ENSGALG00000009044 14492 0.756 - - 0.756 - - - - - - -
75. ENSGALG00000026041 ENSGALG00000026041 13390 0.756 - - - - - - - 0.756 - -
76. MYD88 ENSGALG00000005947 2055 0.756 - - - - - - - 0.756 - - myeloid differentiation primary response 88 [Source:NCBI gene;Acc:420420]
77. NIPA2 ENSGALG00000016737 3792 0.755 - - - - - - - 0.755 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
78. DUSP23 1663 0.754 - - - - - - - - 0.754 - dual specificity phosphatase 23, transcript variant X1
79. TAF2 ENSGALG00000043193 6311 0.754 - - - - - - - 0.754 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
80. KDM6A ENSGALG00000016217 2302 0.751 - - - - - - - 0.751 - - lysine demethylase 6A, transcript variant X14
81. ANAPC16 ENSGALG00000004410 18001 0.751 - - - - - - - 0.751 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
82. CSRP2BP CSRP2BP 4679 0.75 - - - - - - - 0.750 - -
83. ZNF830 ENSGALG00000013156 3896 0.75 - - - - - - - 0.750 - - zinc finger protein 830
84. MAU2 ENSGALG00000002969 10604 0.75 - - - - - - - 0.750 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
85. E2F5 ENSGALG00000038915 3562 0.749 - - - - - - - 0.749 - - E2F transcription factor 5 [Source:NCBI gene;Acc:420206]
86. KIAA1143 ENSGALG00000035952 6735 0.749 - - - - - - - 0.749 - - KIAA1143 [Source:NCBI gene;Acc:420709]
87. EXOC2 ENSGALG00000012837 4914 0.747 - - - - - - - 0.747 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
88. NEDD1 ENSGALG00000031699 3634 0.745 - - - - - - - 0.745 - - neural precursor cell expressed, developmentally down-regulated 1 [Source:NCBI gene;Acc:417922]
89. TMEM138 ENSGALG00000029480 11268 0.744 - - - - - - - 0.744 - - transmembrane protein 138 [Source:NCBI gene;Acc:426323]
90. RYK ENSGALG00000006488 10533 0.743 - - - - - - - 0.743 - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
91. NANS ENSGALG00000015320 10552 0.741 - - - - - - - 0.741 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
92. NUMB ENSGALG00000009300 4220 0.741 - - - - - - - 0.741 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
93. RNF11 ENSGALG00000010539 8617 0.74 - - - - - - - 0.740 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
94. RRP1B ENSGALG00000035696 12309 0.74 - - - - - - - 0.740 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
95. VPS4B ENSGALG00000012879 6720 0.739 - - - - - - - 0.739 - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
96. CDK2AP1 ENSGALG00000034919 5469 0.738 - - - - - - - 0.738 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
97. DLG5 ENSGALG00000043018 2357 0.737 - - - - - - - 0.737 - - discs large MAGUK scaffold protein 5 [Source:HGNC Symbol;Acc:HGNC:2904]
98. EXOC6 ENSGALG00000006763 119 0.735 - - - - - - - - 0.735 - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
99. MRPL2 ENSGALG00000008597 16500 0.734 - - - - - - - 0.734 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
100. CDC42BPB ENSGALG00000011432 8220 0.734 - - - - - - - 0.734 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA