Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS33A

Gene Name Gene ID Reads Annotation
VPS33A ENSGALG00000004440 2030 VPS33A, CORVET/HOPS core subunit, transcript variant X1











Genes with expression patterns similar to VPS33A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS33A ENSGALG00000004440 2030 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VPS33A, CORVET/HOPS core subunit, transcript variant X1
2. CEP70 ENSGALG00000012087 7992 1.616 - - - - - - - 0.701 0.915 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
3. CLP1 ENSGALG00000007370 2047 1.609 - - - - - - - 0.708 0.901 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
4. AHSA2 1504 0.931 - - - - - - - - 0.931 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
5. CARKD CARKD 2914 0.925 - - - - - - - - 0.925 -
6. IPO8 ENSGALG00000012953 499 0.922 - - - - - - - - 0.922 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
7. TMEM177 ENSGALG00000011593 311 0.921 - - - - - - - - 0.921 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
8. SMPDL3B ENSGALG00000000737 223 0.921 - - - - - - - - 0.921 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
9. CDERMO-1 CDERMO-1 279 0.918 - - - - - - - - 0.918 -
10. DIAPH1 DIAPH1 357 0.916 - - - - - - - - 0.916 -
11. NCAPG ENSGALG00000014425 929 0.915 - - - - - - - - 0.915 - non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
12. LAMA5 486 0.914 - - - - - - - - 0.914 - laminin subunit alpha 5, transcript variant X3
13. SLC7A6OS ENSGALG00000035575 2878 0.914 - - - - - - - - 0.914 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
14. GPSM1 ENSGALG00000001797 943 0.913 - - - - - - - - 0.913 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
15. NUDT6 ENSGALG00000011834 1309 0.913 - - - - - - - - 0.913 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
16. ASNS ENSGALG00000009748 11822 0.911 - - - - - - - - 0.911 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
17. GALT ENSGALG00000026195 2002 0.91 - - - - - - - - 0.910 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
18. CLCN7 ENSGALG00000030826 3173 0.909 - - - - - - - - 0.909 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
19. DENND6A ENSGALG00000005656 831 0.906 - - - - - - - - 0.906 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
20. PJA2 ENSGALG00000000264 1574 0.906 - - - - - - - - 0.906 - praja ring finger ubiquitin ligase 2, transcript variant X1
21. KIAA1211 ENSGALG00000013771 135 0.904 - - - - - - - - 0.904 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
22. CCDC104 CCDC104 6584 0.903 - - - - - - - - 0.903 -
23. ENSGALG00000019710 ENSGALG00000019710 212 0.902 - - - - - - - - 0.902 -
24. gga-mir-1466 ENSGALG00000025170 487 0.902 - - - - - - - - 0.902 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
25. DLG3 ENSGALG00000041900 3016 0.9 - - - - - - - - 0.900 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
26. GGA.16412 GGA.16412 846 0.895 - - - - - - - - 0.895 -
27. GSTA GSTA 3130 0.894 - - - - - - - - 0.894 -
28. RPS6KA5 ENSGALG00000030580 218 0.892 - - - - - - - - 0.892 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
29. GNA12 ENSGALG00000004368 692 0.891 - - - - - - - - 0.891 - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
30. NCF1 ENSGALG00000001189 334 0.891 - - - - - - - - 0.891 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
31. PKP2 ENSGALG00000012913 2547 0.891 - - - - - - - - 0.891 - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
32. ARL14EP ENSGALG00000012139 4690 0.89 - - - - - - - - 0.890 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
33. ARHGEF4 ENSGALG00000002193 558 0.89 - - - - - - - - 0.890 - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
34. VTI1A ENSGALG00000008880 279 0.89 - - - - - - - - 0.890 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
35. FAM221A ENSGALG00000010977 695 0.887 - - - - - - - - 0.887 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
36. TRMT12 ENSGALG00000006773 707 0.887 - - - - - - - - 0.887 - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
37. TDRD7 ENSGALG00000012350 594 0.885 - - - - - - - - 0.885 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
38. DYNLT3 ENSGALG00000016259 340 0.885 - - - - - - - - 0.885 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
39. PPIP5K2 ENSGALG00000015264 862 0.883 - - - - - - - - 0.883 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
40. PIGB ENSGALG00000037734 2193 0.882 - - - - - - - - 0.882 - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
41. PCDH20 ENSGALG00000016934 187 0.881 - - - - - - - - 0.881 - protocadherin 20
42. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.881 - - - - - - - - 0.881 - notchless homolog 1, transcript variant X1
43. PDCD4 ENSGALG00000008700 574 0.88 - - - - - - - - 0.880 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
44. RAD21 ENSGALG00000029523 25658 0.88 - - - - - - - - 0.880 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
45. NBR1 ENSGALG00000002765 629 0.879 - - - - - - - - 0.879 - NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
46. MPP3 ENSGALG00000042521 1372 0.878 - - - - - - - - 0.878 - membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
47. ACL ACL 1813 0.876 - - - - - - - - 0.876 -
48. SNW1 ENSGALG00000010501 17767 0.875 - - - - - - - - 0.875 - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
49. LEMD3 ENSGALG00000009873 347 0.875 - - - - - - - - 0.875 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
50. SEP-05_15 SEP-05_15 568 0.875 - - - - - - - - 0.875 -
51. ENSGALG00000014946 ENSGALG00000014946 40 0.872 - - - - - - - - 0.872 -
52. UPB1 ENSGALG00000006627 139 0.871 - - - - - - - - 0.871 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
53. HSDL1 ENSGALG00000003273 1108 0.87 - - - - - - - - 0.870 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
54. WDFY1 ENSGALG00000005158 2512 0.869 - - - - - - - - 0.869 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
55. KIF20B 554 0.868 - - - - - - - - 0.868 - kinesin family member 20B, transcript variant X8
56. REXO4 ENSGALG00000030609 2926 0.868 - - - - - - - - 0.868 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
57. MYCN ENSGALG00000016462 1930 0.866 - - - - - - - - 0.866 - MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
58. TTPA ENSGALG00000030031 500 0.866 - - - - - - - - 0.866 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
59. C1GALT1 ENSGALG00000009752 7148 0.866 - - - - - - - - 0.866 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
60. SWIP-1 SWIP-1 6024 0.865 - - - - - - - - 0.865 -
61. TYSND1 ENSGALG00000033807 716 0.865 - - - - - - - - 0.865 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
62. PPP1R13B ENSGALG00000011548 88 0.864 - - - - - - - - 0.864 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
63. ENSGALG00000020497 ENSGALG00000020497 446 0.862 - - - - - - - - 0.862 -
64. PSMG2 ENSGALG00000013863 351 0.862 - - - - - - - - 0.862 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
65. NKRF ENSGALG00000008645 3531 0.862 - - - - - - - - 0.862 - NFKB repressing factor [Source:NCBI gene;Acc:422370]
66. DTWD2 ENSGALG00000002250 1604 0.861 - - - - - - - - 0.861 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
67. GMFB ENSGALG00000012208 894 0.861 - - - - - - - - 0.861 - glia maturation factor beta [Source:NCBI gene;Acc:423560]
68. DARS ENSGALG00000012355 2887 0.861 - - - - - - - - 0.861 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
69. CCDC171 ENSGALG00000015103 349 0.861 - - - - - - - - 0.861 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
70. GNG11 ENSGALG00000029899 327 0.857 - - - - - - - - 0.857 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
71. ZNF608 ENSGALG00000005016 273 0.856 - - - - - - - - 0.856 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
72. ENSGALG00000008689 ENSGALG00000008689 232 0.855 - - - - - - - - 0.855 -
73. HEBP1 ENSGALG00000011798, ENSGALG00000011799 2359 0.853 - - - - - - - - 0.853 - heme binding protein 1 [Source:NCBI gene;Acc:417961]
74. CYP20A1 ENSGALG00000008730 930 0.853 - - - - - - - - 0.853 - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
75. ITGB1BP2 ENSGALG00000005493 628 0.851 - - - - - - - - 0.851 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
76. AKTIP ENSGALG00000033378 1991 0.85 - - - - - - - - 0.850 - AKT interacting protein [Source:NCBI gene;Acc:415720]
77. CGN ENSGALG00000000920 407 0.85 - - - - - - - - 0.850 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
78. TATDN3 ENSGALG00000009811 1851 0.849 - - - - - - - - 0.849 - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
79. TAPT1 ENSGALG00000014486 2022 0.848 - - - - - - - - 0.848 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
80. STOX1 330 0.846 - - - - - - - - 0.846 - storkhead box 1, transcript variant X3
81. RREB1 ENSGALG00000012799 125 0.846 - - - - - - - - 0.846 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
82. C6H10ORF46 C6H10ORF46 1107 0.845 - - - - - - - - 0.845 -
83. gga-mir-1725 gga-mir-1725 178 0.841 - - - - - - - - 0.841 -
84. TVP23A ENSGALG00000007216 275 0.839 - - - - - - - - 0.839 - trans-golgi network vesicle protein 23 homolog A [Source:HGNC Symbol;Acc:HGNC:20398]
85. TMEM59 ENSGALG00000010746 4669 0.837 - - - - - - - - 0.837 - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
86. DDX28 ENSGALG00000003415 979 0.836 - - - - - - - - 0.836 - DEAD-box helicase 28
87. NMI ENSGALG00000012480 2172 0.831 - - - - - - - - 0.831 - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
88. CEP104 ENSGALG00000000978 1130 0.831 - - - - - - - - 0.831 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
89. BRMS1L ENSGALG00000010093 4964 0.83 - - - - - - - - 0.830 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
90. PAAF1 ENSGALG00000017318 605 0.829 - - - - - - - - 0.829 - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]
91. TMEM69 ENSGALG00000010279 716 0.828 - - - - - - - - 0.828 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
92. BZW1 ENSGALG00000008220 1606 0.828 - - - - - - - - 0.828 - basic leucine zipper and W2 domains 1 [Source:NCBI gene;Acc:424073]
93. RNASEH1 ENSGALG00000016389 2694 0.828 - - - - - - - - 0.828 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
94. GEM ENSGALG00000032506 439 0.827 - - - - - - - - 0.827 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
95. SOSTDC1 ENSGALG00000036836 1081 0.827 - - - - - - - - 0.827 - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
96. MGA 1911 0.824 - - - - - - - - 0.824 - MGA, MAX dimerization protein, transcript variant X15
97. CCDC103 CCDC103 362 0.824 - - - - - - - - 0.824 -
98. EFTUD1 EFTUD1 3455 0.823 - - - - - - - - 0.823 -
99. MYCBP2 ENSGALG00000016915 2374 0.823 - - - - - - - - 0.823 - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
100. ANKRD54 ENSGALG00000012299 1588 0.822 - - - - - - - - 0.822 - ankyrin repeat domain 54, transcript variant X1

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA