Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS29

Gene Name Gene ID Reads Annotation
VPS29 ENSGALG00000004529 22509 VPS29, retromer complex component [Source:NCBI gene;Acc:416867]











Genes with expression patterns similar to VPS29

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS29 ENSGALG00000004529 22509 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
2. CCDC101 CCDC101 9111 1.748 - - - - 0.850 - 0.898 - - -
3. HNRNPLL ENSGALG00000008504 14719 1.736 - - - - 0.860 - 0.876 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
4. SRSF6 ENSGALG00000000990 12424 1.724 - - - - 0.883 - 0.841 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
5. CDC42SE2 ENSGALG00000027258 4725 1.717 - - - - - - 0.874 0.843 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
6. CDR2L ENSGALG00000026295 4142 1.713 - - - - 0.855 - 0.858 - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
7. EIF4E2 ENSGALG00000007919 8163 1.691 - - - - - - 0.831 0.860 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
8. CYFIP1 ENSGALG00000016736 6701 1.686 - - - - - - 0.830 0.856 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
9. AIP ENSGALG00000040247 4166 1.677 - - - - 0.850 - 0.827 - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
10. C5H14ORF166 C5H14ORF166 24176 1.654 - - - - 0.891 - 0.763 - - -
11. SSU72 ENSGALG00000001489 7589 1.641 - - - - - - 0.795 0.846 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
12. NDUFB4 ENSGALG00000027688 8951 1.638 - - - - 0.873 - 0.765 - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
13. IMPA1 ENSGALG00000034487 3691 1.633 - - - - - - 0.784 0.849 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
14. PGAP2 ENSGALG00000027762 2583 1.631 - - - - - - 0.800 0.831 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
15. BUB1 ENSGALG00000008233 11536 1.631 - - - - 0.895 - 0.736 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
16. TLK1 ENSGALG00000009569 5446 1.624 - - - - 0.885 - 0.739 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
17. LFNG ENSGALG00000038515 5178 1.612 - - - - 0.841 - 0.771 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
18. TIMM10 ENSGALG00000004845 31395 1.581 - - - - - - 0.733 0.848 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
19. RBM15B 5416 1.554 - - - - 0.851 - 0.703 - - - RNA binding motif protein 15B
20. KDM5B ENSGALG00000038948 50645 1.458 - - - - 0.705 - 0.753 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
21. CANX ENSGALG00000032148 11297 0.947 - - - - - - 0.947 - - - calnexin [Source:NCBI gene;Acc:416288]
22. CHCHD3 ENSGALG00000006489 18592 0.947 - - - - - - 0.947 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
23. INTS6 ENSGALG00000017018 3083 0.934 - - - - - - 0.934 - - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
24. PARL ENSGALG00000002315 15943 0.933 - - - - - - 0.933 - - - presenilin associated rhomboid like
25. URM1 ENSGALG00000004971 17880 0.933 - - - - - - 0.933 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
26. DTYMK ENSGALG00000006305 11736 0.928 - - - - - - 0.928 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
27. DPYSL3 ENSGALG00000007582 7743 0.927 - - - - - - 0.927 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
28. HSP90AB1 ENSGALG00000010175 77935 0.926 - - - - - - - 0.926 - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
29. SPCS2 ENSGALG00000019036 9496 0.924 - - - - - - 0.924 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
30. CLDND1 ENSGALG00000039538 5048 0.923 - - - - - - 0.923 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
31. SEC22B ENSGALG00000039704 16080 0.922 - - - - - - 0.922 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
32. TOP3B ENSGALG00000030051 5953 0.921 - - - - - - 0.921 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
33. RBM19 ENSGALG00000008289 10702 0.918 - - - - - - 0.918 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
34. ZYX ENSGALG00000014688 8686 0.915 - - - - - - 0.915 - - - zyxin [Source:NCBI gene;Acc:418300]
35. ZNF593 ENSGALG00000000542 79105 0.913 - - - - 0.913 - - - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
36. DBNDD2 ENSGALG00000003921 8301 0.913 - - - - - - 0.913 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
37. PRPF40A ENSGALG00000012526 7724 0.912 - - - - - - 0.912 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
38. RNF10 ENSGALG00000036417 8027 0.911 - - - - - - 0.911 - - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
39. CCNK ENSGALG00000011138 6416 0.911 - - - - - - 0.911 - - - cyclin K [Source:NCBI gene;Acc:423446]
40. ARL5B ENSGALG00000008557 12887 0.908 - - - - - - - 0.908 - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
41. SQLE ENSGALG00000036915 4172 0.908 - - - - - - 0.908 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
42. KRIT1 ENSGALG00000042651 4486 0.908 - - - - - - 0.908 - - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
43. USB1 ENSGALG00000035604 4003 0.906 - - - - - - 0.906 - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
44. ZNF217 ZNF217 14511 0.906 - - - - 0.906 - - - - -
45. MORC3 ENSGALG00000036556 2976 0.905 - - - - - - 0.905 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
46. GPN3 ENSGALG00000003807 6320 0.904 - - - - - - 0.904 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
47. GOLGA7 ENSGALG00000003483 26525 0.904 - - - - 0.904 - - - - - golgin A7 [Source:NCBI gene;Acc:426787]
48. GGA.8379 GGA.8379 4419 0.903 - - - - - - 0.903 - - -
49. IK ENSGALG00000037172 12100 0.903 - - - - - - 0.903 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
50. EPRS ENSGALG00000009598 26412 0.903 - - - - - - - 0.903 - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
51. NDUFC2 ENSGALG00000029172 26136 0.902 - - - - - - - 0.902 - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
52. PPP1R7 ENSGALG00000031766 22187 0.902 - - - - - - - 0.902 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
53. EIF2D ENSGALG00000000856 8348 0.901 - - - - - - 0.901 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
54. CISD2 ENSGALG00000027860 12968 0.901 - - - - 0.901 - - - - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
55. ZFR ENSGALG00000003235 8466 0.897 - - - - - - 0.897 - - - zinc finger RNA binding protein, transcript variant X3
56. COPS8 ENSGALG00000033385 10166 0.897 - - - - - - 0.897 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
57. RALB ENSGALG00000026493 14590 0.897 - - - - - - - 0.897 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
58. ATP1A1 ENSGALG00000032247 15898 0.896 - - - - - - 0.896 - - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
59. PMPCB ENSGALG00000008280 6357 0.893 - - - - - - 0.893 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
60. MOCS2 ENSGALG00000014906 4974 0.893 - - - - 0.893 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
61. TGDS ENSGALG00000016898 3206 0.892 - - - - - - 0.892 - - - TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
62. COL4A5 ENSGALG00000008141 15874 0.891 - - - - 0.891 - - - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
63. SUGT1 ENSGALG00000016946 22881 0.891 - - - - 0.891 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
64. TMEM39B ENSGALG00000003287 4125 0.891 - - - - - - 0.891 - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
65. FLCN ENSGALG00000004816 4101 0.891 - - - - - - 0.891 - - - folliculin, transcript variant X1
66. UFD1L 12964 0.89 - - - - - - 0.890 - - - ubiquitin fusion degradation 1 like (yeast)
67. OCRL ENSGALG00000003920 1812 0.89 - - - - - - 0.890 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
68. MAP3K7 ENSGALG00000015596 15164 0.889 - - - - - - - 0.889 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
69. TMEM167A ENSGALG00000027332 13862 0.889 - - - - 0.889 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
70. MRPL19 ENSGALG00000016731 22670 0.889 - - - - 0.889 - - - - - mitochondrial ribosomal protein L19, transcript variant X1
71. FOXK2 ENSGALG00000001577 6346 0.888 - - - - 0.888 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
72. RANBP1 ENSGALG00000002107 17715 0.888 - - - - 0.888 - - - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
73. RIT1 ENSGALG00000014647 7174 0.887 - - - - - - 0.887 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
74. PPP4R2 ENSGALG00000007810 15127 0.886 - - - - - - - 0.886 - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
75. COPA ENSGALG00000009153 11618 0.885 - - - - 0.885 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
76. MAD2L1 ENSGALG00000011967 16125 0.883 - - - - - - 0.883 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
77. RBM5 30998 0.883 - - - - 0.883 - - - - - RNA binding motif protein 5, transcript variant X1
78. PRKACB ENSGALG00000028530 12506 0.883 - - - - 0.883 - - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
79. MRPL10 ENSGALG00000014387 12386 0.882 - - - - - - 0.882 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
80. LAP3 ENSGALG00000006334 21076 0.881 - - - - 0.881 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
81. ABHD17A ENSGALG00000041163 5578 0.881 - - - - - - 0.881 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
82. EIF3I ENSGALG00000003337 28832 0.881 - - - - - - 0.881 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
83. CEP170 ENSGALG00000010733 4177 0.881 - - - - - - 0.881 - - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
84. NIPA2 ENSGALG00000016737 3792 0.881 - - - - - - 0.881 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
85. CLCN7 ENSGALG00000030826 3173 0.881 - - - - - - 0.881 - - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
86. BMI1 ENSGALG00000041267 6618 0.881 - - - - - - 0.881 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
87. MPPED1 ENSGALG00000014186 5726 0.88 - - - - 0.880 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
88. BCCIP ENSGALG00000006617 13291 0.88 - - - - 0.880 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
89. TADA1L TADA1L 6659 0.88 - - - - - - 0.880 - - -
90. LOC419404 ENSGALG00000021676 12078 0.88 - - - - - - - 0.880 - - uncharacterized LOC419404
91. SUV39H2 ENSGALG00000013920 4360 0.88 - - - - - - 0.880 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
92. CKAP5 ENSGALG00000008325 8494 0.879 - - - - 0.879 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
93. PSMD12 ENSGALG00000026225 17473 0.879 - - - - 0.879 - - - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
94. LEPREL4 LEPREL4 5609 0.879 - - - - 0.879 - - - - -
95. ACTR6 ENSGALG00000040976 31271 0.878 - - - - 0.878 - - - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
96. CDC73 ENSGALG00000002469 4586 0.878 - - - - - - 0.878 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
97. KIAA1524 ENSGALG00000015360 3527 0.878 - - - - - - 0.878 - - - KIAA1524 [Source:NCBI gene;Acc:418410]
98. TRAM1 ENSGALG00000041112 22876 0.878 - - - - 0.878 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
99. LSM10 ENSGALG00000002127 2519 0.877 - - - - - - 0.877 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
100. OCIAD1 ENSGALG00000014081 12065 0.877 - - - - 0.877 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]

There are 482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA