Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VPS13B

Gene Name Gene ID Reads Annotation
VPS13B 2293 vacuolar protein sorting 13 homolog B











Genes with expression patterns similar to VPS13B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS13B 2293 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 13 homolog B
2. KIAA1432 KIAA1432 1792 1.954 - - - 0.960 - - - 0.994 - -
3. STRAP ENSGALG00000013092 13100 1.875 - - - 0.880 - - 0.995 - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
4. ADARB1 ENSGALG00000007527 2480 1.861 - - - 0.866 - - - 0.995 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
5. AP1M1 ENSGALG00000003959 31761 1.858 - - - 0.865 - - 0.993 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
6. NCOA3 ENSGALG00000004570 243 1.83 - - - 0.952 - - - - 0.878 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
7. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 1.793 - - - 0.903 - - - - - 0.890
8. ENSGALG00000026930 ENSGALG00000026930 681 1.792 - - - - - - - 0.994 - 0.798
9. IPO9 ENSGALG00000000397 9263 1.771 - - - 0.831 - - - 0.940 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
10. CAMK2D ENSGALG00000041635 3384 1.771 - - - - - - 0.999 0.772 - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
11. ADCY9 ENSGALG00000007779 766 1.75 - - - 0.964 - - - - - 0.786 adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
12. UBE2D3 ENSGALG00000012311 39831 1.747 - - - - - - 0.958 0.789 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
13. NUDT4 ENSGALG00000011285 2998 1.705 - - - 0.901 - - - - - 0.804 nudix hydrolase 4, transcript variant X5
14. ITGB5 ENSGALG00000029766 5978 1.688 - - - 0.841 - - - 0.847 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
15. GLRX ENSGALG00000027483 217 1.687 - - - - - - - - 0.822 0.865 glutaredoxin [Source:NCBI gene;Acc:396069]
16. C14orf79 C14orf79 401 1.661 - - - - 0.756 - - - 0.905 -
17. PRDM4 ENSGALG00000012619 876 1.657 - - - 0.929 - - - - 0.728 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
18. ATR ENSGALG00000002663 4626 1.644 - - - 0.827 - - - - 0.817 - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
19. CREB1 ENSGALG00000008494 2219 1.639 - - - 0.863 - - - - - 0.776 cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
20. GPR180 ENSGALG00000016897 1545 1.627 - - - - - - - - 0.793 0.834 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
21. SNRK ENSGALG00000039920 174 1.615 - - - - - - - - 0.906 0.709 SNF related kinase [Source:NCBI gene;Acc:420675]
22. POLR3B ENSGALG00000012655 704 1.596 - - - - - - - - 0.720 0.876 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
23. GPR89 GPR89 2253 1.591 - - - 0.884 - - - - - 0.707
24. ENOX2 ENSGALG00000004079 4055 1.57 - - - 0.776 - - - - 0.794 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
25. PGRMC2 ENSGALG00000010209 568 1.542 - - - - - - - - 0.767 0.775 progesterone receptor membrane component 2 [Source:NCBI gene;Acc:422501]
26. GPATCH2 ENSGALG00000009627 4061 1.538 - - - - - - - - 0.783 0.755 G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
27. CCDC47 ENSGALG00000000564 6584 1.534 - - - 0.768 - - - - - 0.766 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
28. OSBPL11 ENSGALG00000012059 2523 1.515 - - - 0.789 - - - - 0.726 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
29. SRRD ENSGALG00000005614 234 1.491 - - - - - 0.721 - - 0.770 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
30. MED7 ENSGALG00000003870 4244 1.488 - - - 0.783 - - - - 0.705 - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
31. NAE1 ENSGALG00000038957 13777 1.448 - - - 0.740 - - - - - 0.708 NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
32. C5H15ORF41 C5H15ORF41 2114 1.445 - - - 0.703 - - - - 0.742 -
33. C10orf54 C10orf54 2444 1 - - - - - - 1.000 - - -
34. ENSGALG00000027132 ENSGALG00000027132 1704 1 - - - - - - 1.000 - - -
35. LYN ENSGALG00000042321 3539 1 - - - - - - 1.000 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
36. C5H15ORF57 C5H15ORF57 4113 1 - - - - - - 1.000 - - -
37. WWP1 ENSGALG00000041795 2291 1 - - - - - - 1.000 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
38. RALGDS ENSGALG00000003412 4478 1 - - - - - - 1.000 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
39. PRKX ENSGALG00000042759 2418 1 - - - - - - 1.000 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
40. SGK1 ENSGALG00000013971 2608 1 - - - - - - 1.000 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
41. C4H8ORF40 C4H8ORF40 6145 0.999 - - - - - - 0.999 - - -
42. ANO5 ENSGALG00000003748 3959 0.999 - - - - - - 0.999 - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
43. ARG2 ENSGALG00000009519 19523 0.999 - - - - - - 0.999 - - - arginase 2 [Source:NCBI gene;Acc:423272]
44. TRAPPC8 ENSGALG00000015157 4308 0.999 - - - - - - 0.999 - - - trafficking protein particle complex 8, transcript variant X5
45. RBM24 ENSGALG00000012712 4138 0.999 - - - - - - 0.999 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
46. TMF1 ENSGALG00000013408 3344 0.998 - - - - - - 0.998 - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
47. DIABLO ENSGALG00000004412 9499 0.998 - - - - - - 0.998 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
48. RND3 ENSGALG00000026313 9271 0.998 - - - - - - 0.998 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
49. ZNF462 ENSGALG00000015451 12653 0.998 - - - - - - 0.998 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
50. KIF23 ENSGALG00000008095 9919 0.997 - - - - - - 0.997 - - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
51. PPT1 ENSGALG00000003936 2540 0.996 - - - - - - - 0.996 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
52. SEPHS1 ENSGALG00000014575 10701 0.995 - - - - - - 0.995 - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
53. SNCAIP ENSGALG00000005330 2425 0.995 - - - - - - - 0.995 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
54. DOCK8 481 0.994 - - - - - - - 0.994 - - dedicator of cytokinesis 8, transcript variant X1
55. PAX-6 PAX-6 2650 0.994 - - - - - - - 0.994 - -
56. ANKRD17 ENSGALG00000011642 3192 0.994 - - - - - - - 0.994 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
57. PGS1 ENSGALG00000007181 3187 0.994 - - - - - - - 0.994 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
58. OGT ENSGALG00000005425 31074 0.994 - - - - - - 0.994 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
59. FGFRL1 ENSGALG00000037525 1687 0.994 - - - - - - - 0.994 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
60. TECPR2 ENSGALG00000011373 1063 0.994 - - - - - - - 0.994 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
61. NFASC ENSGALG00000031776 4264 0.994 - - - - - - - 0.994 - - neurofascin [Source:NCBI gene;Acc:419824]
62. RBM6 ENSGALG00000035578 1690 0.994 - - - - - - - 0.994 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
63. TMEM100 ENSGALG00000026465 1785 0.994 - - - - - - - 0.994 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
64. TF ENSGALG00000006453 14007 0.994 - - - - - - 0.994 - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
65. H2AFY_1 ENSGALG00000040141 4895 0.994 - - - - - - - 0.994 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
66. FBXW8 ENSGALG00000008207 1639 0.994 - - - - - - - 0.994 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
67. DENND5B 4077 0.993 - - - - - - - 0.993 - - DENN domain containing 5B, transcript variant X1
68. ZMYM4 ENSGALG00000002499 435 0.993 - - - - - - - 0.993 - - zinc finger MYM-type containing 4, transcript variant X1
69. CHTOP ENSGALG00000042129 24112 0.993 - - - - - - 0.993 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
70. PTPN11 ENSGALG00000004821 2658 0.993 - - - - - - - 0.993 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
71. NAA50 ENSGALG00000033889 3551 0.993 - - - - - - - 0.993 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
72. NDUFA4 ENSGALG00000025999 53323 0.992 - - - - - - 0.992 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
73. MTRF1 ENSGALG00000016951 3983 0.991 - - - - - - - 0.991 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
74. EPS15 ENSGALG00000010543 1598 0.991 - - - - - - - 0.991 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
75. CCT8 ENSGALG00000015821 12161 0.991 - - - - - - 0.991 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
76. UBE2I ENSGALG00000006428 18421 0.991 - - - - - - 0.991 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
77. EED ENSGALG00000014060 6467 0.99 - - - - - - - 0.990 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
78. PRORSD1P ENSGALG00000034854 2924 0.99 - - - - - - - 0.990 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
79. gga-mir-1787 ENSGALG00000025542 1373 0.989 - - - - - - - 0.989 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
80. QARS ENSGALG00000029980 4207 0.989 - - - - - - - 0.989 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
81. SPPL2A ENSGALG00000031348 16700 0.989 - - - - - - 0.989 - - - signal peptide peptidase like 2A [Source:NCBI gene;Acc:415450]
82. RPAP1 ENSGALG00000008624 3522 0.989 - - - - - - - 0.989 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
83. KCTD9 ENSGALG00000000275 3455 0.988 - - - - - - - 0.988 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
84. CMC1 ENSGALG00000025811 3939 0.988 - - - - - - - 0.988 - - C-X9-C motif containing 1
85. RIOK1 ENSGALG00000012795 4658 0.987 - - - - - - - 0.987 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
86. TBRG4 ENSGALG00000038102 9269 0.987 - - - - - - 0.987 - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
87. KDM4B ENSGALG00000034592 6711 0.987 - - - - - - - 0.987 - - lysine demethylase 4B, transcript variant X8
88. ACAP2 ENSGALG00000007040 4182 0.987 - - - - - - - 0.987 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
89. MB21D1 2460 0.987 - - - - - - - 0.987 - - Mab-21 domain containing 1
90. RHOT1 ENSGALG00000003397 5149 0.986 - - - - - - - 0.986 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
91. PCMT1 ENSGALG00000012388 7778 0.985 - - - - - - 0.985 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
92. SDC3 ENSGALG00000035184 14096 0.985 - - - - - - 0.985 - - - syndecan 3 [Source:NCBI gene;Acc:396343]
93. KNOP1 ENSGALG00000002042 6251 0.984 - - - - - - - 0.984 - - lysine-rich nucleolar protein 1, transcript variant X1
94. FAS ENSGALG00000006351 461 0.983 - - - - - - - 0.983 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
95. OMA1 ENSGALG00000010861 3328 0.982 - - - - - - - 0.982 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
96. ANXA2 ENSGALG00000003770 18252 0.982 - - - - - - 0.982 - - - annexin A2 [Source:NCBI gene;Acc:396297]
97. DDHD1 ENSGALG00000012426 6068 0.982 - - - - - - - 0.982 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
98. ADD1 ENSGALG00000015664 6828 0.982 - - - - - - - 0.982 - - adducin 1 [Source:NCBI gene;Acc:422882]
99. C3H2ORF43 C3H2ORF43 5628 0.981 - - - - - - - 0.981 - -
100. PUF60 ENSGALG00000039901 26902 0.981 - - - - - - 0.981 - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]

There are 792 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA