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Results for VPS13A

Gene Name Gene ID Reads Annotation
VPS13A ENSGALG00000015170 1608 vacuolar protein sorting 13 homolog A [Source:NCBI gene;Acc:427050]











Genes with expression patterns similar to VPS13A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS13A ENSGALG00000015170 1608 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 13 homolog A [Source:NCBI gene;Acc:427050]
2. CD9 ENSGALG00000017274 960 0.828 - - - - - - - - 0.828 - CD9 molecule [Source:NCBI gene;Acc:395527]
3. TMCO3 ENSGALG00000016824 761 0.809 - - - - - - - 0.809 - - transmembrane and coiled-coil domains 3 [Source:NCBI gene;Acc:395675]
4. CASP7 ENSGALG00000008933 506 0.786 - - - - - - - - 0.786 - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
5. SLC35E2B 7675 0.775 - - - - - - 0.775 - - - solute carrier family 35 member E2B
6. VASH2 ENSGALG00000020067 1555 0.773 - - - - - - - - 0.773 - vasohibin 2 [Source:HGNC Symbol;Acc:HGNC:25723]
7. AKIRIN2 ENSGALG00000015791 3858 0.767 - - - - - - - 0.767 - - akirin 2 [Source:NCBI gene;Acc:421821]
8. FBXO7 ENSGALG00000012569 4124 0.759 - - - - - - 0.759 - - - F-box protein 7 [Source:NCBI gene;Acc:418063]
9. NUDT14 ENSGALG00000028940 3795 0.754 - - - - - - - 0.754 - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
10. PSPC1 ENSGALG00000017142 13036 0.751 - - - - - - 0.751 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
11. PLEKHO1 ENSGALG00000037540 1804 0.745 - - - - - - - - 0.745 - pleckstrin homology domain containing O1 [Source:NCBI gene;Acc:426108]
12. NDC80 ENSGALG00000014801 3237 0.744 - - - - - - - 0.744 - - NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
13. MAD1L1 ENSGALG00000004224 2846 0.742 - - - - - - - 0.742 - - mitotic arrest deficient 1 like 1 [Source:HGNC Symbol;Acc:HGNC:6762]
14. ODZ3 ODZ3 2213 0.742 - - - - - - - - 0.742 -
15. AASS ENSGALG00000008953 701 0.739 - - - - - - 0.739 - - - aminoadipate-semialdehyde synthase [Source:HGNC Symbol;Acc:HGNC:17366]
16. gga-mir-6587 ENSGALG00000026386 9441 0.737 - - - - - - 0.737 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
17. CBR1 ENSGALG00000016027 619 0.736 - - - - - - - - - 0.736 carbonyl reductase 1 [Source:NCBI gene;Acc:418512]
18. BRWD3 ENSGALG00000007151 3495 0.734 - - - - - - - 0.734 - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
19. SYNE2 ENSGALG00000011811 5542 0.732 - - - - - - 0.732 - - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
20. FGFR4 ENSGALG00000028543 1228 0.729 - - - - - - - - 0.729 - fibroblast growth factor receptor 4 [Source:HGNC Symbol;Acc:HGNC:3691]
21. ORAOV1 1267 0.724 - - - - - - - - 0.724 - oral cancer overexpressed 1, transcript variant X2
22. SCLY ENSGALG00000030194 3025 0.722 - - - - - - 0.722 - - - selenocysteine lyase [Source:NCBI gene;Acc:424739]
23. GPALPP1 ENSGALG00000031567 4221 0.722 - - - - - - 0.722 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
24. PTGR1 ENSGALG00000015702 3667 0.721 - - - - - - - 0.721 - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
25. SLC29A3 1141 0.717 - - - - - - - - 0.717 - solute carrier family 29 member 3
26. PI4K2B ENSGALG00000031538 2607 0.717 - - - - - - - - 0.717 - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
27. KIAA0319L ENSGALG00000002445 75 0.716 - - - - - - - - 0.716 - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
28. COBRA1 COBRA1 4600 0.715 - - - - - - - 0.715 - -
29. MED27 ENSGALG00000003683 6808 0.714 - - - - - - 0.714 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
30. WHAMM ENSGALG00000006002 1678 0.714 - - - - - - - - - 0.714 WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
31. C12H3ORF19 C12H3ORF19 1278 0.713 - - - - - - - 0.713 - -
32. TMEM200C ENSGALG00000030210 1434 0.712 - - - - - - 0.712 - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
33. MTR ENSGALG00000014464 90 0.712 - - - - - - - - 0.712 - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
34. ECD ENSGALG00000002686 2872 0.712 - - - - - - - - 0.712 - ecdysoneless cell cycle regulator [Source:NCBI gene;Acc:423638]
35. C1H11ORF54 ENSGALG00000017219 2066 0.711 - - - - - - - - 0.711 - chromosome 1 open reading frame, human C11orf54 [Source:NCBI gene;Acc:419001]
36. DLGAP4 ENSGALG00000001046 6872 0.711 - - - - - - 0.711 - - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
37. CDC42BPA ENSGALG00000009158 3926 0.708 - - - - - - 0.708 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
38. ITSN1 ENSGALG00000036677 5727 0.706 - - - - - - - 0.706 - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
39. SNX16 ENSGALG00000029678 1104 0.705 - - - - - - - - 0.705 - sorting nexin 16 [Source:NCBI gene;Acc:420202]
40. N-RAS N-RAS 5787 0.705 - - - - - - 0.705 - - -
41. SEC63 ENSGALG00000015308 11596 0.705 - - - - - - 0.705 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
42. KIRREL 1906 0.704 - - - - - - - 0.704 - - kin of IRRE like (Drosophila)
43. ENSGALG00000010963 ENSGALG00000010963 462 0.703 - - - - - - - 0.703 - -
44. RIF1 ENSGALG00000012484 2248 0.702 - - - - - - - 0.702 - - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
45. RPS6KC1 ENSGALG00000009796 1830 0.702 - - - - - - 0.702 - - - ribosomal protein S6 kinase C1 [Source:HGNC Symbol;Acc:HGNC:10439]
46. ENSGALG00000016116 ENSGALG00000016116 2547 0.702 - - - - - - - 0.702 - -
47. UBR2 ENSGALG00000009906 7717 0.7 - - - - - - 0.700 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA