Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VMA21

Gene Name Gene ID Reads Annotation
VMA21 ENSGALG00000009065 6432 VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]











Genes with expression patterns similar to VMA21

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VMA21 ENSGALG00000009065 6432 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
2. NEK6 ENSGALG00000001118 20333 2.475 - - - - 0.946 - 0.708 0.821 - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
3. GSPT1 15580 2.453 - - 0.812 - 0.908 - 0.733 - - - G1 to S phase transition 1, transcript variant X1
4. TOR1AIP1 ENSGALG00000029238 5843 2.274 - - 0.736 - - - 0.739 - - 0.799 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
5. OGFOD3 ENSGALG00000001618 2438 1.774 - - - - - - - 0.974 - 0.800 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
6. PSMG3 ENSGALG00000004203 11240 1.77 - - - - 0.965 - - - - 0.805 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
7. RNF4 ENSGALG00000015668 15780 1.758 - - - - 0.905 - - 0.853 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
8. STK4 ENSGALG00000004098 11366 1.733 - - - - 0.872 - - 0.861 - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
9. ZFX ENSGALG00000016327 5470 1.722 - - - - - - - 0.946 - 0.776 zinc finger protein, X-linked, transcript variant X4
10. TNFRSF1A ENSGALG00000039461 1569 1.72 - - - - - - - 0.966 - 0.754 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
11. LMAN2 ENSGALG00000033232 11740 1.695 - - - - 0.959 - 0.736 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
12. SSU72 ENSGALG00000001489 7589 1.694 - - - - - - 0.720 0.974 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
13. PSMD3 ENSGALG00000033162 25615 1.693 - - - - 0.933 - 0.760 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
14. PPP1R7 ENSGALG00000031766 22187 1.687 - - - - - - 0.727 0.960 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
15. MARC1 ENSGALG00000009453 5675 1.684 - - - - 0.951 - 0.733 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
16. HARS ENSGALG00000035080 11602 1.678 - - - - 0.946 - 0.732 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
17. DGCR2 ENSGALG00000005891 8405 1.676 - - - - - - 0.702 0.974 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
18. UTP6 ENSGALG00000003260 4909 1.676 - - - - 0.948 - 0.728 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
19. MINOS1 ENSGALG00000004039 37740 1.67 - - - - 0.901 - - 0.769 - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
20. GABARAPL2 ENSGALG00000003208 9195 1.669 - - - - 0.887 - 0.782 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
21. MAP3K7 ENSGALG00000015596 15164 1.666 - - - - - - 0.768 0.898 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
22. TAF3 ENSGALG00000006731 15569 1.662 - - - - 0.949 - 0.713 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
23. CENPP ENSGALG00000004687 6707 1.655 - - - - 0.927 - 0.728 - - - centromere protein P [Source:NCBI gene;Acc:415952]
24. SMC4 ENSGALG00000009553 15715 1.641 - - 0.779 - - - 0.862 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
25. LGALS1 ENSGALG00000012420 13993 1.639 - - - - 0.935 - 0.704 - - - galectin 1 [Source:NCBI gene;Acc:396491]
26. KPNA2 ENSGALG00000003584 76058 1.629 - - 0.718 - 0.911 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
27. UQCRH ENSGALG00000017380 55734 1.627 - - - - 0.874 - 0.753 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
28. RPL22 ENSGALG00000000719 74238 1.625 - - 0.705 - 0.920 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
29. CEP78 ENSGALG00000015179 5227 1.618 - - - - 0.896 - 0.722 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
30. TM9SF3 ENSGALG00000005534 15290 1.609 - - 0.703 - 0.906 - - - - - transmembrane 9 superfamily member 3
31. DDX27 ENSGALG00000006974 18388 1.605 - - - - 0.860 - 0.745 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
32. BMS1 ENSGALG00000002624 8339 1.599 - - 0.800 - - - 0.799 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
33. WTAP ENSGALG00000011660 10811 1.591 - - 0.780 - - - 0.811 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
34. UMPS ENSGALG00000011770 11331 1.58 - - - - 0.854 - 0.726 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
35. ELOVL5 ENSGALG00000016314 18163 1.577 - - 0.755 - 0.822 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
36. MED17 ENSGALG00000017218 5821 1.57 - - - - - - 0.761 - - 0.809 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
37. ANKRA2 ENSGALG00000013511 3460 1.57 - - - - - - 0.749 - - 0.821 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
38. CDH1 ENSGALG00000000608 6156 1.565 - - - - - - 0.745 0.820 - - cadherin 3 [Source:NCBI gene;Acc:414845]
39. RAB34 ENSGALG00000026315 1193 1.563 - - 0.829 - - - - - - 0.734 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
40. MLST8 ENSGALG00000005878 8116 1.561 - - - - - - 0.776 - - 0.785 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
41. HMGN1 ENSGALG00000016067 17375 1.56 - - 0.717 - - - - 0.843 - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
42. GRPEL1 ENSGALG00000015549 11246 1.559 - - - - - - 0.794 - - 0.765 GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
43. TOP2B ENSGALG00000011300 25048 1.558 - - - - 0.809 - - - - 0.749 DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
44. GTF2IRD1 ENSGALG00000001263 14716 1.548 - - 0.812 - - - 0.736 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
45. CBLL1 ENSGALG00000038981 6725 1.542 - - 0.818 - - - 0.724 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
46. LSM5 ENSGALG00000041625 22307 1.537 - - - - 0.821 - 0.716 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
47. SENP6 ENSGALG00000015901 8013 1.535 - - 0.760 - - - 0.775 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
48. PTTG1 17936 1.533 - - 0.832 - - - 0.701 - - - pituitary tumor-transforming 1, transcript variant X1
49. MRPL15 ENSGALG00000041086 16820 1.52 - - - - - - 0.704 - - 0.816 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
50. CTBP1 ENSGALG00000039942 9383 1.501 - - 0.726 - - - 0.775 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
51. CSTF2 ENSGALG00000006760 8820 1.486 - - - - - - 0.741 - - 0.745 cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
52. RFWD3 2315 1.485 - - - - - - 0.700 - - 0.785 ring finger and WD repeat domain 3
53. UCHL3 ENSGALG00000016921 16208 1.48 - - - - - - 0.759 0.721 - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
54. FBXL17 ENSGALG00000000276 2443 1.474 - - - - - - 0.736 - - 0.738 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
55. TNRC6A ENSGALG00000006068 9166 1.459 - - - - - - 0.739 - - 0.720 trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
56. MYCL ENSGALG00000024047 10367 1.455 - - - - - - 0.712 - - 0.743 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
57. PSMB4 ENSGALG00000000905 46735 1.431 - - - - - - 0.716 0.715 - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
58. URI1 ENSGALG00000004506 6024 0.975 - - - - - - - 0.975 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
59. IMPA1 ENSGALG00000034487 3691 0.975 - - - - - - - 0.975 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
60. HADHA ENSGALG00000016536 3791 0.974 - - - - - - - 0.974 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
61. SLC4A1AP ENSGALG00000010047 3171 0.974 - - - - - - - 0.974 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
62. SIK1 ENSGALG00000041988 2179 0.974 - - - - - - - 0.974 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
63. EVC ENSGALG00000015037 1963 0.974 - - - - - - - 0.974 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
64. C1H11ORF67 C1H11ORF67 2089 0.973 - - - - - - - 0.973 - -
65. CDC42SE2 ENSGALG00000027258 4725 0.973 - - - - - - - 0.973 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
66. NME3 ENSGALG00000027635 5974 0.973 - - - - - - - 0.973 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
67. ING4 ENSGALG00000014457 5561 0.973 - - - - - - - 0.973 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
68. SPTBN5 395 0.972 - - - - - - - 0.972 - - spectrin beta, non-erythrocytic 5
69. LANCL2 ENSGALG00000032570 815 0.972 - - - - - - - 0.972 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
70. MCM2 ENSGALG00000006037 13458 0.972 - - - - - - - 0.972 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
71. ALG6 ENSGALG00000010991 3258 0.972 - - - - - - - 0.972 - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
72. ARID3C ENSGALG00000005839 646 0.972 - - - - - - - 0.972 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
73. SGTA ENSGALG00000014067 2248 0.972 - - - - - - - 0.972 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
74. PSTK 2511 0.972 - - - - - - - 0.972 - - phosphoseryl-tRNA kinase, transcript variant X1
75. CYFIP1 ENSGALG00000016736 6701 0.971 - - - - - - - 0.971 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
76. BOD1L1 ENSGALG00000026470 9250 0.971 - - - - - - - 0.971 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
77. EIF4E2 ENSGALG00000007919 8163 0.969 - - - - - - - 0.969 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
78. ANGPTL2 ENSGALG00000000927 2580 0.968 - - - - - - - 0.968 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
79. NCAPD2 ENSGALG00000039448 8658 0.967 - - - - - - - 0.967 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
80. GLMN ENSGALG00000005959 2049 0.967 - - - - - - - 0.967 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
81. TPMT ENSGALG00000012687 9537 0.966 - - - - - - - 0.966 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
82. PGAP2 ENSGALG00000027762 2583 0.966 - - - - - - - 0.966 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
83. RILPL2 ENSGALG00000003321 5632 0.964 - - - - - - - 0.964 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
84. TSG101 ENSGALG00000006312 8289 0.963 - - - - - - - 0.963 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
85. ENSGALG00000006569 ENSGALG00000006569 2169 0.963 - - - - 0.963 - - - - -
86. KIF11 ENSGALG00000030597 5528 0.961 - - - - 0.961 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
87. LZIC ENSGALG00000002616 9052 0.961 - - - - 0.961 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
88. EIF1B ENSGALG00000038646 9508 0.961 - - - - - - - 0.961 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
89. TIMM10 ENSGALG00000004845 31395 0.96 - - - - - - - 0.960 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
90. WDR92 ENSGALG00000008760 3934 0.96 - - - - 0.960 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
91. FNDC5 ENSGALG00000003567 3328 0.958 - - - - 0.958 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
92. RWDD3 ENSGALG00000038421 10909 0.957 - - - - - - - 0.957 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
93. PHTF1 ENSGALG00000001845 3276 0.957 - - - - 0.957 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
94. ARF6 ENSGALG00000026944 22014 0.957 - - - - - - - 0.957 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
95. PTK2B ENSGALG00000016564 406 0.956 - - - - 0.956 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
96. PITHD1 ENSGALG00000003986 11470 0.956 - - - - 0.956 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
97. PTDSS1 ENSGALG00000030185 5515 0.955 - - - - - - - 0.955 - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
98. C9orf85 ENSGALG00000026001 4110 0.955 - - - - 0.955 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
99. BRF1 ENSGALG00000011705 3406 0.955 - - - - 0.955 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
100. RALGDS ENSGALG00000003412 4478 0.955 - - - - 0.955 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10

There are 857 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA