Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VMA21

Gene Name Gene ID Reads Annotation
VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]










Genes with expression patterns similar to VMA21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
2. fgg ENSDARG00000037281, ENSDARG00000114705 10817 2.365 0.738 - - - - 0.702 0.925 - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
3. COL2A1 COL2A1 18161 1.968 - 0.978 - - - - 0.990 - -
4. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.849 - - 0.850 - - - 0.999 - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
5. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.819 - 0.980 - - - - 0.839 - - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
6. adka ENSDARG00000039429 7670 1.816 - 0.933 - - - 0.883 - - - adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
7. st14a ENSDARG00000061173 3800 1.81 0.810 - - - - - 1.000 - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
8. COLGALT1 ENSDARG00000073974 5069 1.783 - 0.990 - - - 0.793 - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
9. KRTCAP2 ENSDARG00000070386 10103 1.77 - 0.990 0.780 - - - - - - keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
10. isca1 ENSDARG00000051956 5855 1.766 0.849 - - - - 0.917 - - - iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
11. MAL 9331 1.732 - 0.851 0.881 - - - - - - mal, T-cell differentiation protein
12. ctps1a ENSDARG00000030700 3868 1.731 - - 0.915 - - 0.816 - - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
13. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.725 - - - - - 0.826 0.899 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
14. zgc:92360 ENSDARG00000038151 2161 1.721 - - 0.887 - - 0.834 - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
15. wnt10a ENSDARG00000017155 491 1.712 - - 0.900 - - 0.812 - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
16. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.708 - 0.991 0.717 - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
17. tax1bp1b ENSDARG00000056856 4526 1.699 - - 0.939 - - 0.760 - - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
18. ak2 ENSDARG00000005926 7598 1.695 - - 0.762 - - 0.933 - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
19. mid1ip1l ENSDARG00000018145 2789 1.69 0.826 - - - - 0.864 - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
20. si:ch211-250c4.3 si:ch211-250c4.3 677 1.677 0.764 - 0.913 - - - - - -
21. sb:cb37 ENSDARG00000041645 2018 1.677 0.827 - - - - 0.850 - - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
22. rbp4l ENSDARG00000044684 3292 1.663 0.787 - - - - 0.876 - - - retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
23. NDUFC2 ENSDARG00000102115 7848 1.636 - 0.802 0.834 - - - - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
24. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.635 0.882 - - - - 0.753 - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
25. CABZ01111496.1 ENSDARG00000003041 15566 1.63 - - - - - - 0.919 - 0.711 E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
26. prdm1a ENSDARG00000002445 1340 1.612 0.706 - 0.906 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
27. tmem9b ENSDARG00000025693 2693 1.604 0.780 - - - - 0.824 - - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
28. C11H1orf50 C11H1orf50 671 1.6 0.830 - - - - 0.770 - - -
29. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.596 0.742 - - - - 0.854 - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
30. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 1.595 0.839 - - - - 0.756 - - - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
31. shmt1 ENSDARG00000052816 5463 1.594 0.707 - - - - 0.887 - - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
32. sirt2 ENSDARG00000011488 5389 1.587 - - 0.883 - - 0.704 - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
33. rac2 ENSDARG00000038010 5837 1.579 0.756 - 0.823 - - - - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
34. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 1.578 - - 0.862 - - 0.716 - - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
35. dusp22a ENSDARG00000056396 605 1.561 0.708 - - - - 0.853 - - - dual specificity phosphatase 22a [Source:ZFIN;Acc:ZDB-GENE-040718-219]
36. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.55 0.787 - - - - 0.763 - - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
37. BX004812.1 ENSDARG00000096968 5467 1.547 - 0.831 - - - 0.716 - - -
38. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.538 0.715 - - - - 0.823 - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
39. bdh2 ENSDARG00000052696 1157 1.53 0.795 - - - - 0.735 - - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:ZFIN;Acc:ZDB-GENE-050417-343]
40. psen2 ENSDARG00000015540 832 1.527 0.710 - - - - 0.817 - - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
41. tanc2 tanc2 804 1.525 - - - - - 0.811 - - 0.714
42. otub1b ENSDARG00000011462 4329 1.521 0.777 - - - - 0.744 - - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
43. ptprfb ENSDARG00000005754 7178 1.504 0.703 - 0.801 - - - - - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
44. MCUR1 MCUR1 786 1.503 0.745 - - - - 0.758 - - -
45. mst1 ENSDARG00000103308 581 1.486 0.775 - - - - 0.711 - - - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
46. mthfd1b ENSDARG00000040492 3784 1.476 0.759 - - - - 0.717 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
47. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.46 0.713 - - - - 0.747 - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
48. atpif1b 8625 1.459 0.702 - 0.757 - - - - - - ATPase inhibitory factor 1b
49. oxct1b ENSDARG00000054319 396 1.456 0.745 - - - - 0.711 - - - 3-oxoacid CoA transferase 1b [Source:ZFIN;Acc:ZDB-GENE-060929-212]
50. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.448 0.705 - - - - 0.743 - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
51. DYNC1I2 DYNC1I2 4131 1.423 - - - - - 0.715 - - 0.708
52. csrp1a ENSDARG00000006603 5188 1 - - - - - - 1.000 - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
53. RB1CC1 ENSDARG00000076559 2771 1 - - - - - - 1.000 - - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
54. acat2 ENSDARG00000007127 3052 1 - - - - - - 1.000 - - acetyl-CoA acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-990714-22]
55. slc22a7a ENSDARG00000056028 2426 1 - - - - - - 1.000 - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
56. rnf20 ENSDARG00000016664 3641 1 - - - - - - 1.000 - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
57. hes6 ENSDARG00000019335 4754 1 - - - - - - 1.000 - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
58. tmem5 1630 1 - - - - - - 1.000 - - transmembrane protein 5
59. si:dkey-42p8.3 1117 1 - - - - - - 1.000 - - si:dkey-42p8.3, transcript variant X1
60. XPR1 XPR1 3354 1 - - - - - - 1.000 - -
61. cers2a ENSDARG00000013704 4239 1 - - - - - - 1.000 - - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
62. CR293507.1 ENSDARG00000112572 3198 1 - - - - - - 1.000 - -
63. pdlim4 ENSDARG00000068973 2567 1 - - - - - - 1.000 - - PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
64. twf1a ENSDARG00000115712 3465 1 - - - - - - 1.000 - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
65. smurf2 ENSDARG00000038067 2057 1 - - - - - - 1.000 - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
66. C7H16orf87 C7H16orf87 5197 1 - - - - - - 1.000 - -
67. epdl1 ENSDARG00000076386 1747 0.999 - - - - - - 0.999 - - ependymin-like 1 [Source:ZFIN;Acc:ZDB-GENE-090710-3]
68. SAMD4A ENSDARG00000075759 3282 0.998 - - - - - - 0.998 - - sterile alpha motif domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-070720-7]
69. matn3a ENSDARG00000069245 2410 0.998 - - - - - - 0.998 - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
70. sucla2 ENSDARG00000005359 5992 0.998 - - - - - - 0.998 - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
71. si:ch211-166a6.5 ENSDARG00000079745 11111 0.997 - - - - - - 0.997 - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
72. kars ENSDARG00000103799 20937 0.996 - - - - - - 0.996 - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
73. hp1bp3 ENSDARG00000044669 23708 0.995 - - - - - - 0.995 - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
74. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 0.994 - - - - - - 0.994 - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
75. neb ENSDARG00000032630, ENSDARG00000109273 19493 0.993 - - - - - - 0.993 - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
76. ube2i2 ube2i2 4828 0.992 - 0.992 - - - - - - -
77. serp1 ENSDARG00000099439 23682 0.992 - - - - - - 0.992 - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
78. tmem189 ENSDARG00000042732 4004 0.99 - 0.990 - - - - - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
79. RBM33 RBM33 1954 0.99 - 0.990 - - - - - - -
80. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 0.99 - 0.990 - - - - - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
81. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.99 - 0.990 - - - - - - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
82. usp7 ENSDARG00000073710 7017 0.99 - 0.990 - - - - - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
83. ak4 ENSDARG00000006546 1528 0.99 - 0.990 - - - - - - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
84. h2afy2_1 ENSDARG00000087897 9887 0.989 - 0.989 - - - - - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
85. abhd10b 2128 0.989 - 0.989 - - - - - - - abhydrolase domain containing 10b
86. pon1 ENSDARG00000032496 1375 0.989 - 0.989 - - - - - - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
87. chd7 ENSDARG00000075211 12085 0.989 - 0.989 - - - - - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
88. ddx21 ENSDARG00000063626 6695 0.989 - 0.989 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
89. hoxc13a ENSDARG00000070353 4815 0.988 - 0.988 - - - - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
90. spcs2 ENSDARG00000042823 10032 0.988 - 0.988 - - - - - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
91. rtn3 ENSDARG00000091348 2070 0.988 - 0.988 - - - - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
92. plod1a ENSDARG00000059746 3364 0.988 - 0.988 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
93. slc25a36b ENSDARG00000015915 1750 0.988 - 0.988 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
94. itpkcb ENSDARG00000067741 2370 0.988 - 0.988 - - - - - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
95. BX005368.2 BX005368.2 702 0.988 - 0.988 - - - - - - -
96. ptpreb ENSDARG00000021151 739 0.988 - 0.988 - - - - - - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
97. nfyba ENSDARG00000039185 1804 0.988 - 0.988 - - - - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
98. qdpra ENSDARG00000040190 4064 0.988 - 0.988 - - - - - - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
99. dctn2 ENSDARG00000031388 3825 0.988 - 0.988 - - - - - - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
100. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.988 - 0.988 - - - - - - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]

There are 1067 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA