Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VLDL

Gene Name Gene ID Reads Annotation
VLDL VLDL 13











Genes with expression patterns similar to VLDL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VLDL VLDL 13 5 - - 1.000 1.000 1.000 1.000 - - - 1.000
2. TMEM52B ENSGALG00000034698 169 1.942 - - - 1.000 0.942 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
3. FLI1 ENSGALG00000001161 2 1.703 - - - 1.000 - - - - - 0.703 Fli-1 proto-oncogene, ETS transcription factor [Source:NCBI gene;Acc:419723]
4. CBS ENSGALG00000016196 8 1.432 - - 0.729 - - - - - - 0.703 cystathionine-beta-synthase, transcript variant X3
5. ENSGALG00000023927 ENSGALG00000023927 0 1 - - - 1.000 - - - - - -
6. SIX4 ENSGALG00000017389 10 1 - - - - 1.000 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
7. PRUNE2 ENSGALG00000015167 37 1 - - - 1.000 - - - - - - prune homolog 2, transcript variant X5
8. TAB3 ENSGALG00000016284 40 1 - - - - 1.000 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
9. GRID2 ENSGALG00000010397 6 1 - - - 1.000 - - - - - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
10. PLD4 ENSGALG00000011646 0 1 - - - 1.000 - - - - - - phospholipase D family member 4 [Source:HGNC Symbol;Acc:HGNC:23792]
11. P2RY1 ENSGALG00000010357 11 1 - - - 1.000 - - - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
12. KLHL23 ENSGALG00000020737 13 1 - - - 1.000 - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
13. SLC22A7 ENSGALG00000001661 9 1 - - - - 1.000 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
14. C2orf50 ENSGALG00000046449 17 1 - - - - 1.000 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
15. CDHR5 CDHR5 1 1 - - - 1.000 - - - - - -
16. RC3H2 ENSGALG00000001253 18 1 - - - - 1.000 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
17. LRRC72 9 1 - - - 1.000 - - - - - - leucine rich repeat containing 72, transcript variant X4
18. VMO1 ENSGALG00000017172 1 1 - - - 1.000 - - - - - - vitelline membrane outer layer 1 homolog [Source:NCBI gene;Acc:418974]
19. TMEM132D ENSGALG00000002671 12 1 - - - - 1.000 - - - - - transmembrane protein 132D, transcript variant X6
20. UMODL1 ENSGALG00000016157 1 1 - - - 1.000 - - - - - - uromodulin like 1 [Source:HGNC Symbol;Acc:HGNC:12560]
21. MYLK3 ENSGALG00000004334 13 1 - - - - 1.000 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
22. ZMAT3 ENSGALG00000040948 4 1 - - - 1.000 - - - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
23. TSHB ENSGALG00000002550 0 1 - - - 1.000 - - - - - - thyroid stimulating hormone beta [Source:NCBI gene;Acc:395937]
24. GDNF ENSGALG00000003716 7 1 - - - 1.000 - - - - - - glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
25. C2 ENSGALG00000035721 5 1 - - - 1.000 - - - - - - complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
26. USH1G ENSGALG00000038769 4 1 - - - 1.000 - - - - - - USH1 protein network component sans [Source:HGNC Symbol;Acc:HGNC:16356]
27. ADMP ENSGALG00000037408 24 1 - - - 1.000 - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
28. INHBB ENSGALG00000028770 2 1 - - - 1.000 - - - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
29. TEKT1 ENSGALG00000006064 18 1 - - - 1.000 - - - - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
30. PGBD5 ENSGALG00000011111 1 1 - - - 1.000 - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
31. LICOS LICOS 13 1 - - - 1.000 - - - - - -
32. MILR1 ENSGALG00000046212 7 1 - - - - 1.000 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
33. VTG2 ENSGALG00000001863 1 1 - - - 1.000 - - - - - - vitellogenin 2 [Source:NCBI gene;Acc:424533]
34. VWC2L ENSGALG00000003472 13 1 - - - 1.000 - - - - - - von Willebrand factor C domain containing protein 2 like [Source:HGNC Symbol;Acc:HGNC:37203]
35. CCDC60 ENSGALG00000046262 0 1 - - - 1.000 - - - - - - coiled-coil domain containing 60 [Source:HGNC Symbol;Acc:HGNC:28610]
36. VWA3A 6 1 - - - 1.000 - - - - - - von Willebrand factor A domain containing 3A, transcript variant X4
37. ENSGALG00000027162 ENSGALG00000027162 8 1 - - - 1.000 - - - - - -
38. CNKSR3 ENSGALG00000027159 41 1 - - - 1.000 - - - - - - CNKSR family member 3, transcript variant X2
39. HOXA9 ENSGALG00000028983 9298 1 - - - - 1.000 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
40. FXR FXR 52 1 - - - 1.000 - - - - - -
41. TECPR1 ENSGALG00000003507 20 1 - - - - 1.000 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
42. LDB1 ENSGALG00000007641 2 1 - - - 1.000 - - - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
43. MADCAM1 ENSGALG00000028341 6 1 - - - 1.000 - - - - - - mucosal vascular addressin cell adhesion molecule 1
44. COQ2 ENSGALG00000041294 25 1 - - - 1.000 - - - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
45. ENSGALG00000026782 ENSGALG00000026782 0 1 - - - 1.000 - - - - - -
46. HTR5A ENSGALG00000006362 1 1 - - - 1.000 - - - - - - 5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]
47. THBD ENSGALG00000044442 6 1 - - - 1.000 - - - - - - thrombomodulin
48. SNX21 ENSGALG00000006836 5 1 - - - - 1.000 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
49. ENSGALG00000022155 ENSGALG00000022155 80 0.991 - - - - 0.991 - - - - -
50. ENSGALG00000013318 ENSGALG00000013318 8 0.986 - - - - 0.986 - - - - -
51. TAPBPL ENSGALG00000014428 39 0.985 - - - - 0.985 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
52. K123 ENSGALG00000041978 16 0.977 - - - - 0.977 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
53. ST3GAL5 ENSGALG00000033260 19 0.961 - - - - 0.961 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
54. TMEM156 ENSGALG00000024490 9 0.956 - - - - 0.956 - - - - - transmembrane protein 156, transcript variant X5
55. ENSGALG00000028328 ENSGALG00000028328 23 0.953 - - - - 0.953 - - - - -
56. HECW1 ENSGALG00000037193 24 0.95 - - - - 0.950 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
57. ENSGALG00000000346 ENSGALG00000000346 130 0.947 - - - - 0.947 - - - - -
58. DAPK1 ENSGALG00000012608 17 0.937 - - - - 0.937 - - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
59. ENSGALG00000010054 ENSGALG00000010054 81 0.933 - - - - 0.933 - - - - -
60. PRPS2 ENSGALG00000016592 165 0.917 - - - - 0.917 - - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
61. NCX3 NCX3 16 0.907 - - - - 0.907 - - - - -
62. ENSGALG00000021517 ENSGALG00000021517 7 0.904 - - - - 0.904 - - - - -
63. COL8A2 ENSGALG00000002298 27 0.891 - - - - 0.891 - - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
64. AEBP2 ENSGALG00000038026 133 0.888 - - - - 0.888 - - - - - AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
65. PPP1R36 ENSGALG00000040026 24 0.884 - - - - 0.884 - - - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
66. CRDS2 CRDS2 22 0.881 - - - - - - - - - 0.881
67. SHC1 ENSGALG00000039775 219 0.875 - - - - 0.875 - - - - - SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]
68. HOXD8 ENSGALG00000037272 4338 0.87 - - - - 0.870 - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
69. CCL17 ENSGALG00000024466 10 0.867 - - - - 0.867 - - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
70. TTC26 ENSGALG00000011847 80 0.847 - - - - 0.847 - - - - - tetratricopeptide repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:21882]
71. ACVR1C ENSGALG00000041257 37 0.846 - - - - - - - - - 0.846 activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]
72. ENTHD2 684 0.845 - - - - 0.845 - - - - - ENTH domain containing 2, transcript variant X1
73. F3 ENSGALG00000005619 110 0.841 - - - - 0.841 - - - - - coagulation factor III, tissue factor
74. YES1 ENSGALG00000014860 31 0.841 - - - - 0.841 - - - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
75. GPR174 ENSGALG00000004111 16 0.84 - - - - 0.840 - - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
76. PAX2 ENSGALG00000005689 351 0.83 - - - - 0.830 - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
77. ADAM28 ENSGALG00000000357 57 0.828 - - - - 0.828 - - - - - ADAM metallopeptidase domain 28, transcript variant X2
78. DLEC1 ENSGALG00000005826 23 0.827 - - - 0.827 - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
79. FAM73A FAM73A 7 0.827 - - 0.827 - - - - - - -
80. C3ORF64 C3ORF64 49 0.825 - - - - 0.825 - - - - -
81. RHOJ ENSGALG00000011855 17 0.822 - - - - 0.822 - - - - - ras homolog family member J [Source:NCBI gene;Acc:423513]
82. ENSGALG00000024159 ENSGALG00000024159 461 0.822 - - - - 0.822 - - - - -
83. QRSL1 ENSGALG00000015338 16 0.801 - - - - - - - - - 0.801 QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
84. SGMS2 ENSGALG00000010535 42 0.789 - - - - 0.789 - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
85. LOC416622 ENSGALG00000007030 30 0.788 - - - - - - - - - 0.788 transmembrane protein 180-like, transcript variant X8
86. ACOT6 ENSGALG00000009292 38 0.788 - - - - 0.788 - - - - - acyl-CoA thioesterase 6 [Source:HGNC Symbol;Acc:HGNC:33159]
87. RAB3GAP1 ENSGALG00000012214 457 0.785 - - - - 0.785 - - - - - RAB3 GTPase activating protein catalytic subunit 1 [Source:HGNC Symbol;Acc:HGNC:17063]
88. SERGEF ENSGALG00000006231 35 0.784 - - - - 0.784 - - - - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
89. WDR66 ENSGALG00000004365 70 0.783 - - - - - - - - - 0.783 WD repeat domain 66 [Source:HGNC Symbol;Acc:HGNC:28506]
90. SCTR ENSGALG00000012106 49 0.779 - - - - - - - - - 0.779 secretin receptor [Source:NCBI gene;Acc:770943]
91. DEPDC1 ENSGALG00000011275 1264 0.778 - - - - 0.778 - - - - - DEP domain containing 1 [Source:NCBI gene;Acc:424710]
92. CSTA ENSGALG00000014412 422 0.769 - - - - - 0.769 - - - - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
93. CASR ENSGALG00000038405 53 0.768 - - - - 0.768 - - - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
94. ABHD2 ENSGALG00000006689 29 0.768 - - - - - - - - - 0.768 abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
95. SCL SCL 69 0.759 - - - - 0.759 - - - - -
96. TSPAN8 ENSGALG00000010152 2666 0.757 - - - - 0.757 - - - - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
97. PCOLCE2 ENSGALG00000002623 8 0.756 - - - 0.756 - - - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
98. PARD6B ENSGALG00000007994 15 0.753 - - - - 0.753 - - - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
99. AQP3 ENSGALG00000002452 97 0.746 - - - - 0.746 - - - - - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
100. C9orf3 C9orf3 47 0.744 - - - - 0.744 - - - - -

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA