Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VIP

Gene Name Gene ID Reads Annotation
VIP ENSGALG00000013604 153 vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]











Genes with expression patterns similar to VIP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VIP ENSGALG00000013604 153 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
2. ZDHHC20 ENSGALG00000017126 58 1.718 - - - - - - - 0.938 - 0.780 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
3. DLL1 ENSGALG00000011182 1613 1.587 - - - - - 0.745 - 0.842 - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
4. CHL1 ENSGALG00000037856 1565 1.567 - - - - - 0.806 - 0.761 - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
5. SLC1A3 ENSGALG00000003582 2283 1.531 - - - - - 0.792 - 0.739 - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
6. PARM1 ENSGALG00000010268 13 0.994 - - - - - - - 0.994 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
7. SH3GL1 ENSGALG00000001121 159 0.979 - - - - - - - 0.979 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
8. DHX58 ENSGALG00000023821 15 0.974 - - - - - - - 0.974 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
9. CPB1 ENSGALG00000006834 25 0.974 - - - - - - - 0.974 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
10. ENSGALG00000018499 ENSGALG00000018499 100 0.974 - - - - - - - 0.974 - -
11. UBE3C ENSGALG00000006461 57 0.974 - - - - - - - 0.974 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
12. TAGAP ENSGALG00000013747 34 0.974 - - - - - - - 0.974 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
13. KLF11 ENSGALG00000016440 65 0.974 - - - - - - - 0.974 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
14. PCASP2 ENSGALG00000027961 42 0.971 - - - - - - - 0.971 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
15. gga-mir-454 ENSGALG00000033526 22 0.969 - - - - - - - 0.969 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
16. IRF-4 IRF-4 19 0.968 - - - - - - - 0.968 - -
17. PSTPIP2 ENSGALG00000040136 37 0.954 - - - - - - - 0.954 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
18. HMGXB3 ENSGALG00000005770 119 0.953 - - - - - - - 0.953 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
19. SENP7 ENSGALG00000044642 48 0.952 - - - - - - - 0.952 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
20. BTK ENSGALG00000004958 272 0.951 - - - - - - - 0.951 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
21. PVALB1 PVALB1 267 0.949 - - - - - - - 0.949 - -
22. HAGH ENSGALG00000005398 168 0.948 - - - - - - - 0.948 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
23. PPP2CA_1 ENSGALG00000006462 3170 0.942 - - - - - - - 0.942 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
24. EPC1 ENSGALG00000007169 101 0.93 - - - - - - - 0.930 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
25. SVCT2 SVCT2 400 0.93 - - - - - - - 0.930 - -
26. FBXO22 ENSGALG00000039897 377 0.924 - - - - - - - 0.924 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
27. SLC6A2 ENSGALG00000003560 108 0.921 - - - - - - - 0.921 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
28. CCDC73 ENSGALG00000012103 17 0.92 - - - - - - - 0.920 - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
29. SAMSN1 ENSGALG00000040926 88 0.916 - - - - - - - 0.916 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
30. SFI1 104 0.912 - - - - - - - 0.912 - - SFI1 centrin binding protein, transcript variant X6
31. SACM1L ENSGALG00000040902 70 0.909 - - - - - - - 0.909 - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
32. CYP2J22 ENSGALG00000011394 76 0.906 - - - - - - - 0.906 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
33. ITGB1BP2 ENSGALG00000005493 628 0.904 - - - - - - - 0.904 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
34. MGEA5 116 0.903 - - - - - - - 0.903 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
35. CYTIP ENSGALG00000012545 25 0.901 - - - - - - - 0.901 - - cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
36. ANKRD26 ENSGALG00000009104 71 0.9 - - - - - - - 0.900 - - ankyrin repeat domain 26 [Source:NCBI gene;Acc:417764]
37. DCT ENSGALG00000016899 37 0.896 - - - - - - - 0.896 - - dopachrome tautomerase [Source:NCBI gene;Acc:395775]
38. TK1 ENSGALG00000007191 277 0.889 - - - - - - - 0.889 - - thymidine kinase 1 [Source:NCBI gene;Acc:395719]
39. LHFPL5 ENSGALG00000039170 247 0.886 - - - - - - - 0.886 - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
40. PLXND1 ENSGALG00000008473 21 0.882 - - - - - - - 0.882 - - plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
41. KCNG3 ENSGALG00000009919 243 0.882 - - - - - - - 0.882 - - potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
42. SLC35C1 ENSGALG00000008438 486 0.881 - - - - - - - 0.881 - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
43. MFSD7 209 0.872 - - - - - - - 0.872 - - major facilitator superfamily domain containing 7, transcript variant X2
44. LRP2 ENSGALG00000010858 363 0.872 - - - - - 0.872 - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
45. GRPEL2 ENSGALG00000002673 105 0.868 - - - - - - - 0.868 - - GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
46. EGLN3 ENSGALG00000010001 32 0.867 - - - - - - - 0.867 - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
47. PDXK ENSGALG00000016205 26 0.866 - - - - - - - 0.866 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
48. PIGF ENSGALG00000020057 201 0.865 - - - - - - - 0.865 - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
49. EP4 EP4 486 0.864 - - - - - - - 0.864 - -
50. ATP11A ENSGALG00000041644 74 0.86 - - - - - - - 0.860 - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
51. SKIL ENSGALG00000009356 335 0.859 - - - - - - - 0.859 - - SKI like proto-oncogene [Source:NCBI gene;Acc:396087]
52. CKB ENSGALG00000011511 2100 0.859 - - - - - 0.859 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
53. NECAB1 ENSGALG00000029509 202 0.859 - - - - - - - 0.859 - - N-terminal EF-hand calcium binding protein 1 [Source:NCBI gene;Acc:420219]
54. DRD2 ENSGALG00000007794 399 0.857 - - - - - - - - - 0.857 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
55. ZFC3H1 ENSGALG00000010177 1326 0.852 - - - - - - - 0.852 - - zinc finger C3H1-type containing [Source:HGNC Symbol;Acc:HGNC:28328]
56. FAT4 ENSGALG00000011823 774 0.851 - - - - - - - 0.851 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
57. PIK3CB ENSGALG00000005505 338 0.849 - - - - - - - 0.849 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta [Source:NCBI gene;Acc:424826]
58. LIPG ENSGALG00000043734 2490 0.848 - - - - - 0.848 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
59. RAB3B ENSGALG00000010567 894 0.847 - - - - - - - - - 0.847 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
60. CP ENSGALG00000030773 119 0.846 - - - - - - - 0.846 - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
61. FMR1 ENSGALG00000009177 561 0.846 - - - - - - - 0.846 - - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
62. LPCAT1 ENSGALG00000013189 197 0.844 - - - - - - - 0.844 - - lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:25718]
63. ASL1 ENSGALG00000002558 78 0.844 - - - - - - - 0.844 - - argininosuccinate lyase 1 [Source:NCBI gene;Acc:396498]
64. CRABP-I ENSGALG00000003193 67258 0.841 - - - - - 0.841 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
65. ENSGALG00000026925 ENSGALG00000026925 119 0.835 - - - - - - - - - 0.835
66. ENSGALG00000020700 ENSGALG00000020700 44 0.831 - - - - - - - - - 0.831
67. ZNF767 ENSGALG00000036870 933 0.83 - - - - - - - 0.830 - - zinc finger family member 767 [Source:NCBI gene;Acc:420372]
68. MOXD1 ENSGALG00000002911 8523 0.83 - - - - - 0.830 - - - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
69. SIAH3 ENSGALG00000026849 384 0.83 - - - - - - - 0.830 - - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
70. MUC6 ENSGALG00000040530 11 0.829 - - - - - - - - - 0.829 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
71. DPYS ENSGALG00000039011 54 0.828 - - - - - - - - - 0.828 dihydropyrimidinase [Source:NCBI gene;Acc:420266]
72. ZIC1 ENSGALG00000040532 6543 0.826 - - - - - 0.826 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
73. SAPCD2 12 0.826 - - - - - - - - - 0.826 suppressor APC domain containing 2, transcript variant X1
74. CXorf30 CXorf30 172 0.825 - - - - - - - - - 0.825
75. ARL15 ENSGALG00000014911 13 0.825 - - - - - - - - - 0.825 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
76. GBP1 ENSGALG00000000720 55 0.824 - - - - - - - 0.824 - - guanylate binding protein 1
77. PAX3 ENSGALG00000030944 2987 0.823 - - - - - 0.823 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
78. ZMYND10 ENSGALG00000035883 58 0.823 - - - - - - - 0.823 - - zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
79. MKL2 186 0.822 - - - - - - - 0.822 - - MKL1/myocardin like 2, transcript variant X4
80. CRYAB ENSGALG00000007945 937 0.821 - - - - - 0.821 - - - - crystallin alpha B [Source:NCBI gene;Acc:396089]
81. PTPRZ1 ENSGALG00000040114 3410 0.821 - - - - - 0.821 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
82. ATHL1 ATHL1 16 0.821 - - - - - - - - - 0.821
83. RFXAP ENSGALG00000019087 37 0.82 - - - - - - - - - 0.820 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
84. WNT4 ENSGALG00000041708 1277 0.818 - - - - - 0.818 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
85. ZBTB34 ENSGALG00000023407 198 0.817 - - - - - - - 0.817 - - zinc finger and BTB domain containing 34 [Source:NCBI gene;Acc:417090]
86. IFT80 ENSGALG00000009559 57 0.817 - - - - - - - - - 0.817 intraflagellar transport 80 [Source:HGNC Symbol;Acc:HGNC:29262]
87. CXCL13L2 ENSGALG00000010338 370 0.816 - - - - - - - 0.816 - - C-X-C motif chemokine ligand 13-like 2 [Source:NCBI gene;Acc:422510]
88. KIF14 ENSGALG00000002175 137 0.815 - - - - - - - 0.815 - - kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]
89. CHRNA7 ENSGALG00000004096 107 0.815 - - 0.815 - - - - - - - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
90. COL3A1 ENSGALG00000035584 39 0.814 - - - - - - - 0.814 - - collagen type III alpha 1 chain [Source:NCBI gene;Acc:396340]
91. GNG10 ENSGALG00000015683 6905 0.811 - - - - - 0.811 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
92. CNTNAP4 ENSGALG00000023179 13 0.81 - - - - - - - - - 0.810 contactin associated protein like 4
93. PSTPIP1 ENSGALG00000002786 9 0.81 - - - - - - - - - 0.810 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
94. DSTYK ENSGALG00000041123 12 0.81 - - - - - - - - - 0.810 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
95. SIDT1 ENSGALG00000014812 20 0.81 - - - - - - - - - 0.810 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
96. DRAM1 ENSGALG00000012761 53 0.81 - - - - - - - - - 0.810 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
97. MOCS1 ENSGALG00000010051 70 0.81 - - - - - - - - - 0.810 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
98. CCR4 ENSGALG00000039146 20 0.81 - - - - - - - - - 0.810 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
99. ENSGALG00000002020 ENSGALG00000002020 183 0.81 - - - - - - - - - 0.810
100. TRH ENSGALG00000008490 16 0.81 - - - - - - - - - 0.810 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]

There are 151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA