Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VIMP

Gene Name Gene ID Reads Annotation
VIMP VIMP 4379











Genes with expression patterns similar to VIMP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VIMP VIMP 4379 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. UCHL3 ENSGALG00000016921 16208 1.5 - - - - - - 0.756 - - 0.744 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
3. PCNP ENSGALG00000015330 15750 1.498 - - - - 0.775 - - - - 0.723 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
4. FBXO21 ENSGALG00000008201 2608 1.483 - - - - - - - 0.735 - 0.748 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
5. ENSGALG00000009044 ENSGALG00000009044 14492 1.422 - - - - - - 0.700 - - 0.722
6. TRRAP ENSGALG00000003596 6032 1.415 - - - - - - 0.713 - - 0.702 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
7. GTF3C1 ENSGALG00000007387 5788 1.413 - - - - 0.700 - - - - 0.713 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
8. FNTA ENSGALG00000015397 3741 0.885 - - - - - - - - - 0.885 farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
9. PIK3CD ENSGALG00000002583 1036 0.825 - - - - - - - 0.825 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
10. CLCN3 ENSGALG00000009674 3704 0.815 - - - - - - - 0.815 - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
11. RBX1 ENSGALG00000011993 26090 0.812 - - - - - - - - - 0.812 ring-box 1 [Source:NCBI gene;Acc:418001]
12. GNG2 ENSGALG00000027629 9404 0.809 - - - - - - 0.809 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
13. LARP7 ENSGALG00000012048 8393 0.806 - - - - - - 0.806 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
14. IGF2 ENSGALG00000035282 513 0.801 - - - - - - - - - 0.801 insulin like growth factor 2 [Source:NCBI gene;Acc:395097]
15. GRTP1 ENSGALG00000016828 3145 0.801 - - - - - - - - - 0.801 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
16. GGA.8379 GGA.8379 4419 0.8 - - - - - - - - - 0.800
17. MTMR8 ENSGALG00000007590 6022 0.796 - - - - - - - - - 0.796 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
18. EMP2 ENSGALG00000027058 3925 0.793 - - - - - - - - - 0.793 epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
19. GGA.31975 GGA.31975 8825 0.791 - - - - - - - - - 0.791
20. BET1 ENSGALG00000024485 2451 0.791 - - - - - - - - - 0.791 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
21. NDUFA4 ENSGALG00000025999 53323 0.79 - - - - - - - - - 0.790 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
22. TMEM68 ENSGALG00000031835 1691 0.787 - - - - - - - - - 0.787 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
23. CCDC51 ENSGALG00000006465 1845 0.785 - - - - - - - - - 0.785 coiled-coil domain containing 51, transcript variant X1
24. CPT1A ENSGALG00000007077 3199 0.783 - - - - - - - 0.783 - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
25. MRPL50 ENSGALG00000015543 11649 0.782 - - - - - - - - - 0.782 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
26. BAG1 ENSGALG00000013157 4014 0.782 - - - - - - - - - 0.782 BCL2 associated athanogene 1 [Source:NCBI gene;Acc:420967]
27. CHRAC1 ENSGALG00000040823 5695 0.779 - - - - - - - - - 0.779 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
28. ARF4 ENSGALG00000005622 50567 0.779 - - - - - 0.779 - - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
29. CEP70 ENSGALG00000012087 7992 0.779 - - - - - - - 0.779 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
30. SNRPC ENSGALG00000002773 21965 0.778 - - - - - - 0.778 - - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
31. GABPB1 ENSGALG00000023440 5676 0.778 - - - - - - 0.778 - - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
32. C5H15ORF41 C5H15ORF41 2114 0.777 - - - - - - 0.777 - - -
33. NID2 ENSGALG00000012394 6717 0.776 - - - - - - 0.776 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
34. PI4KA ENSGALG00000040756 3973 0.774 - - - - 0.774 - - - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
35. ENSGALG00000005389 ENSGALG00000005389 553 0.771 - - - - - - - - - 0.771
36. MRPS31 ENSGALG00000017033 9287 0.77 - - - - - - - - - 0.770 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
37. ALG6 ENSGALG00000010991 3258 0.769 - - - - 0.769 - - - - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
38. FOCAD ENSGALG00000015071 3677 0.769 - - - - - - - - - 0.769 focadhesin [Source:NCBI gene;Acc:427233]
39. LRRN4 ENSGALG00000008815 481 0.769 - - - - - - - - - 0.769 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
40. SAT1 ENSGALG00000016348 8469 0.768 - - - - - - - 0.768 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
41. CWC22 ENSGALG00000009001 5984 0.768 - - - - - - - - - 0.768 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
42. NUP85 ENSGALG00000007974 21249 0.768 - - - - - - 0.768 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
43. ANKRD17 ENSGALG00000011642 3192 0.767 - - - - - - - - - 0.767 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
44. RELL1 ENSGALG00000014336 2950 0.765 - - - - 0.765 - - - - - RELT like 1 [Source:NCBI gene;Acc:422795]
45. CNDP2 ENSGALG00000019514 19531 0.764 - - - - - - - - - 0.764 carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
46. TMEM167A ENSGALG00000027332 13862 0.764 - - - - - - 0.764 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
47. SYNGR2 ENSGALG00000027902 6953 0.763 - - - - - - - - - 0.763 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
48. NOC3L ENSGALG00000035667 7441 0.761 - - - - - - - - - 0.761 NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
49. IDS ENSGALG00000009154 1177 0.761 - - - - - - - - - 0.761 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
50. RAB5C ENSGALG00000003359 5597 0.76 - - - - - - - 0.760 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
51. ARPC1B ENSGALG00000032588 2407 0.76 - - - - - - - - - 0.760 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
52. MRPL30 ENSGALG00000016760 16965 0.759 - - - - - - 0.759 - - - mitochondrial ribosomal protein L30
53. SLC35D1 ENSGALG00000011121 4456 0.759 - - - - 0.759 - - - - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
54. ANKHD1 ENSGALG00000001099 10103 0.758 - - - - - - - - - 0.758 ankyrin repeat and KH domain containing 1 [Source:NCBI gene;Acc:416143]
55. FREM3 ENSGALG00000020561 1824 0.758 - - - - - - - - - 0.758 FRAS1 related extracellular matrix 3
56. ACBD6 ACBD6 4293 0.757 - - - - 0.757 - - - - -
57. MICALL1 ENSGALG00000012265 3753 0.757 - - - - - - - 0.757 - - MICAL like 1 [Source:NCBI gene;Acc:418032]
58. OSBPL1A ENSGALG00000015086 2702 0.756 - - - - - - - - - 0.756 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
59. PRPF38B ENSGALG00000001972 2009 0.756 - - - - - - - - - 0.756 pre-mRNA processing factor 38B
60. TRMT10A ENSGALG00000012264 2467 0.756 - - - - - - 0.756 - - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
61. MTA3 ENSGALG00000009925 1914 0.755 - - - - - - 0.755 - - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
62. GEMIN2 ENSGALG00000010154 7695 0.755 - - - - - - 0.755 - - - gem nuclear organelle associated protein 2 [Source:NCBI gene;Acc:423336]
63. ZNF385D ENSGALG00000011283 2578 0.754 - - - - 0.754 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
64. RALGAPB ENSGALG00000001420 5112 0.754 - - - - 0.754 - - - - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
65. RER1 ENSGALG00000021683 9074 0.754 - - - - - - - - - 0.754 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
66. HABP4 ENSGALG00000012628 2894 0.753 - - - - - - - - - 0.753 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
67. PCGF6 ENSGALG00000008230 1690 0.752 - - - - - - 0.752 - - - polycomb group ring finger 6 [Source:HGNC Symbol;Acc:HGNC:21156]
68. USP7 ENSGALG00000007307 2973 0.751 - - - - - - - - - 0.751 ubiquitin specific peptidase 7 [Source:NCBI gene;Acc:395126]
69. gga-mir-6599 ENSGALG00000028121 4746 0.751 - - - - - - 0.751 - - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
70. PCLO 249 0.751 - - - - - - - - - 0.751 piccolo presynaptic cytomatrix protein
71. ASAP2 ENSGALG00000016419 1393 0.751 - - - - - - - - - 0.751 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
72. CNN2 ENSGALG00000027777 512 0.751 - - - - 0.751 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
73. PPP2R5D ENSGALG00000040005 6804 0.751 - - - - - - 0.751 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
74. TIPARP ENSGALG00000010256 1825 0.751 - - - - - - - 0.751 - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
75. FASTKD3 ENSGALG00000033521 1186 0.751 - - - - - - - - - 0.751 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
76. ACP6 ENSGALG00000015485 3147 0.75 - - - - 0.750 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
77. ENSGALG00000005615 ENSGALG00000005615 4354 0.75 - - - - 0.750 - - - - -
78. PDPN ENSGALG00000030096 647 0.748 - - - - - - - - - 0.748 podoplanin, transcript variant X4
79. ABHD17C ENSGALG00000006420 2220 0.748 - - - - - - - 0.748 - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
80. MYH1D ENSGALG00000027323 365 0.748 - - - - - - - - - 0.748 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
81. WHSC1 1712 0.748 - - - - - - - - - 0.748 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
82. ASB3 ENSGALG00000008176 5422 0.748 - - - - - - - - - 0.748 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
83. ENSGALG00000024418 ENSGALG00000024418 7187 0.747 - - - - - - - - - 0.747
84. MED7 ENSGALG00000003870 4244 0.747 - - - - 0.747 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
85. PDIA3 ENSGALG00000008348 4982 0.747 - - - - - - - - - 0.747 protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
86. CHMP3 ENSGALG00000015805 11581 0.746 - - - - - - 0.746 - - - charged multivesicular body protein 3
87. ARL13B ENSGALG00000015412 2968 0.746 - - - - - - - - - 0.746 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
88. POMP ENSGALG00000017090 5504 0.746 - - - - - - 0.746 - - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
89. ZFR ENSGALG00000003235 8466 0.746 - - - - - - - - - 0.746 zinc finger RNA binding protein, transcript variant X3
90. MTERFD1 MTERFD1 3640 0.746 - - - - - - - - - 0.746
91. NDUFS4 ENSGALG00000028026 25876 0.746 - - - - - - - - - 0.746 NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
92. SRSF1 ENSGALG00000005525 4376 0.745 - - - - - - - 0.745 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
93. NCAPG2 ENSGALG00000006525 2319 0.744 - - - - - - - - - 0.744 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
94. CYB5R2 ENSGALG00000032372 7967 0.744 - - - - - - - - - 0.744 cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
95. WDSUB1 ENSGALG00000012574 2038 0.744 - - - - - - - - - 0.744 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
96. MOSPD1 ENSGALG00000006132 8503 0.743 - - - - 0.743 - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
97. KLHL7 ENSGALG00000010938 528 0.742 - - - - - - - - - 0.742 kelch like family member 7 [Source:NCBI gene;Acc:420612]
98. CPT2 ENSGALG00000010681 3211 0.742 - - - - - - - - - 0.742 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
99. YIPF3 ENSGALG00000041037 6126 0.742 - - - - - - - - - 0.742 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
100. MED21 ENSGALG00000027435 5766 0.741 - - - - - - - 0.741 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]

There are 246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA