Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VIMENTIN

Gene Name Gene ID Reads Annotation
VIMENTIN VIMENTIN 33105











Genes with expression patterns similar to VIMENTIN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VIMENTIN VIMENTIN 33105 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. PPAP2B PPAP2B 11002 2.292 - - - - 0.814 - 0.759 0.719 - -
3. SLC25A15 ENSGALG00000017032 6773 1.908 - - - - 0.911 - - 0.997 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
4. CDC45 ENSGALG00000001616 8432 1.783 - - - - - - 0.808 0.975 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
5. RUVBL1 ENSGALG00000005931 9379 1.745 - - - - 0.923 - 0.822 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
6. URB1 ENSGALG00000015887 5854 1.738 - - - - - - 0.741 0.997 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
7. TCTN3 ENSGALG00000010517 3985 1.726 - - - - - - 0.729 0.997 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
8. AMOTL2 5217 1.721 - - - - - - 0.727 0.994 - - angiomotin like 2, transcript variant X3
9. TLK2 ENSGALG00000000410 4690 1.715 - - - - - - 0.717 0.998 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
10. MYC ENSGALG00000033631 16949 1.712 - - - - 0.860 - 0.852 - - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
11. SLC35E1 ENSGALG00000003794 2563 1.711 - - - - - - 0.715 0.996 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
12. MZT1 ENSGALG00000016932 9269 1.704 - - - - - - 0.748 0.956 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
13. NUPL1 NUPL1 8197 1.702 - - - - 0.917 - 0.785 - - -
14. FAM110A ENSGALG00000046425 5558 1.699 - - - - - - - 0.926 - 0.773 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
15. TTC37 ENSGALG00000014670 5715 1.686 - - - - 0.894 - 0.792 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
16. TMEM184C ENSGALG00000010019 7856 1.681 - - - - 0.921 - 0.760 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
17. CYB5R2 ENSGALG00000032372 7967 1.671 - - - - 0.893 - 0.778 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
18. IGF2BP2 ENSGALG00000033195 11421 1.647 - - - - 0.863 - 0.784 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
19. BRMS1L ENSGALG00000010093 4964 1.642 - - - - 0.906 - 0.736 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
20. TMEM70 ENSGALG00000033568 10720 1.637 - - - - 0.854 - 0.783 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
21. UBE2E3 ENSGALG00000020793 9517 1.629 - - - - 0.907 - 0.722 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
22. TXNDC11 ENSGALG00000003154 2224 1.626 - - - - 0.893 - 0.733 - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
23. MYBBP1A ENSGALG00000001363 10331 1.622 - - - - 0.913 - 0.709 - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
24. TMEM30A ENSGALG00000015904 8533 1.614 - - - - - - 0.707 0.907 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
25. ILF2 ENSGALG00000011570 23050 1.613 - - - - 0.828 - 0.785 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
26. AN1ZNF5L ENSGALG00000014589 21148 1.603 - - - - 0.827 - 0.776 - - - AN1-type zinc finger protein 5-like, transcript variant X2
27. GTF2H3 ENSGALG00000023682 9914 1.601 - - - - 0.881 - 0.720 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
28. METAP2 ENSGALG00000011377 16311 1.591 - - - - 0.845 - 0.746 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
29. RRP9 ENSGALG00000043359 9747 1.588 - - - - - - 0.718 0.870 - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
30. MCTS1 ENSGALG00000008517 27514 1.569 - - - - - - 0.737 0.832 - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
31. ENSGALG00000009771 ENSGALG00000009771 10273 1.555 - - - - 0.855 - 0.700 - - -
32. SSR3 ENSGALG00000028683 24334 1.553 - - - - - - 0.708 0.845 - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
33. MURC 3759 1.508 - - - - - - 0.748 - - 0.760 muscle related coiled-coil protein
34. FKBP12 FKBP12 64317 1.481 - - - - 0.745 - 0.736 - - -
35. NDUFA10 ENSGALG00000004302 41948 1.47 - - - - 0.745 - - 0.725 - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
36. FABP5 ENSGALG00000041344 3984 1.463 - - - - - - 0.759 - - 0.704 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
37. TAGLN3 ENSGALG00000015379 7865 1.459 - - 0.700 - - - - - - 0.759 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
38. WNK2 ENSGALG00000038850 4712 1.435 - - - - - - 0.716 - - 0.719 WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
39. ITGA1 ENSGALG00000014891 11378 0.997 - - - - - - - 0.997 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
40. PRKRIP1 ENSGALG00000001833 5092 0.997 - - - - - - - 0.997 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
41. COX20 ENSGALG00000027440 5881 0.996 - - - - - - - 0.996 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
42. FBN2 ENSGALG00000014686 4538 0.996 - - - - - - - 0.996 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
43. EXOC4 ENSGALG00000008477 4684 0.996 - - - - - - - 0.996 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
44. KIAA1324L ENSGALG00000030324 1695 0.996 - - - - - - - 0.996 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
45. LZTFL1 ENSGALG00000033928 3493 0.996 - - - - - - - 0.996 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
46. PDCD2 ENSGALG00000011169 3594 0.996 - - - - - - - 0.996 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
47. PPP1R21 ENSGALG00000008937 2343 0.996 - - - - - - - 0.996 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
48. KIAA1598 KIAA1598 989 0.995 - - - - - - - 0.995 - -
49. SLC2A10 ENSGALG00000004498 421 0.995 - - - - - - - 0.995 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
50. ACAD8 ENSGALG00000001557 2562 0.995 - - - - - - - 0.995 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
51. PUM1 ENSGALG00000042598 9392 0.995 - - - - - - - 0.995 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
52. SPTAN1 ENSGALG00000004719 20251 0.995 - - - - - - - 0.995 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
53. PKIB ENSGALG00000027036 1663 0.995 - - - - - - - 0.995 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
54. KCTD10 ENSGALG00000005138 1191 0.995 - - - - - - - 0.995 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
55. PLA2R1 ENSGALG00000011149 1964 0.995 - - - - - - - 0.995 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
56. PPP2R3C ENSGALG00000010052 637 0.995 - - - - - - - 0.995 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
57. KCNE3 ENSGALG00000022696 561 0.995 - - - - - - - 0.995 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
58. CDCA9 ENSGALG00000021225 2244 0.995 - - - - - - - 0.995 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
59. VATB VATB 13756 0.994 - - - - - - - 0.994 - -
60. ARL4A ENSGALG00000027757 4285 0.993 - - - - - - - 0.993 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
61. KDELR3 ENSGALG00000032313 4376 0.992 - - - - - - - 0.992 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
62. MYO1B ENSGALG00000007712 8755 0.988 - - - - - - - 0.988 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
63. DGKD ENSGALG00000001730 4456 0.978 - - - - - - - 0.978 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
64. KBTBD2 ENSGALG00000038704 2821 0.978 - - - - - - - 0.978 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
65. ENSGALG00000004132 ENSGALG00000004132 9287 0.973 - - - - - - - 0.973 - -
66. AATF ENSGALG00000005420 6501 0.973 - - - - - - - 0.973 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
67. RAE1 ENSGALG00000007653 8930 0.968 - - - - - - - 0.968 - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
68. STRN ENSGALG00000010580 7561 0.966 - - - - - - - 0.966 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
69. GPATCH2 ENSGALG00000009627 4061 0.966 - - - - - - - 0.966 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
70. IGF2BP1 ENSGALG00000041204 6420 0.965 - - - - - - - 0.965 - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
71. MRPS18A ENSGALG00000010296 11039 0.96 - - - - - - - 0.960 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
72. KLF10 ENSGALG00000037913 3529 0.959 - - - - - - - 0.959 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
73. UCH-L1 UCH-L1 12697 0.953 - - - - - - - 0.953 - -
74. CPSF6 ENSGALG00000019355 7634 0.95 - - - - - - - 0.950 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
75. CHMP1A ENSGALG00000006161 4195 0.949 - - - - - - - 0.949 - - charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
76. CYTL1 ENSGALG00000015015 4438 0.948 - - - - - - - 0.948 - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
77. HIBCH ENSGALG00000043307 11990 0.944 - - - - - - - 0.944 - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
78. INPP5E ENSGALG00000001964 3580 0.932 - - - - - - - 0.932 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
79. GLI2 ENSGALG00000011630 3347 0.929 - - - - 0.929 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
80. NDUFA4 ENSGALG00000025999 53323 0.929 - - - - 0.929 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
81. CHD4 ENSGALG00000013565 25695 0.928 - - - - 0.928 - - - - - chromodomain helicase DNA binding protein 4
82. CYB5A ENSGALG00000013708 8287 0.927 - - - - - - - 0.927 - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
83. ZBTB8OS ENSGALG00000003517 2436 0.926 - - - - 0.926 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
84. COG6 ENSGALG00000017035 2777 0.924 - - - - 0.924 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
85. KLF3 ENSGALG00000041717 2787 0.924 - - - - 0.924 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
86. DAP3 ENSGALG00000019796 13278 0.923 - - - - 0.923 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
87. ZZZ3 ENSGALG00000008988 3132 0.923 - - - - 0.923 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
88. REXO5 ENSGALG00000002239 2466 0.923 - - - - 0.923 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
89. EXOSC3 ENSGALG00000002426 7255 0.923 - - - - 0.923 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
90. COQ3 ENSGALG00000015486 3508 0.922 - - - - 0.922 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
91. GALNTL4 GALNTL4 3548 0.922 - - - - 0.922 - - - - -
92. TMEM97 ENSGALG00000005702 2037 0.921 - - - - 0.921 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
93. ALDH18A1 ENSGALG00000034655 3038 0.92 - - - - 0.920 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
94. ROMO1 ENSGALG00000027416 9560 0.92 - - - - 0.920 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
95. CALCA CALCA 682 0.919 - - - - 0.919 - - - - -
96. MICALL1 ENSGALG00000012265 3753 0.919 - - - - 0.919 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
97. MAPKAPK2 ENSGALG00000000883 6174 0.919 - - - - 0.919 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
98. PRKCD ENSGALG00000002016 1476 0.919 - - - - 0.919 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
99. BBS2 ENSGALG00000042415 1816 0.919 - - - - 0.919 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
100. FZD6 ENSGALG00000030626 3336 0.918 - - - - 0.918 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]

There are 678 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA