Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VIM

Gene Name Gene ID Reads Annotation
VIM ENSG00000026025 143979 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]



Genes with expression patterns similar to VIM

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. VIM ENSG00000026025 143979 2 1.000 1.000 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
2. ZIC2 ENSG00000043355 4457 0.793 0.793 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
3. SOX3 ENSG00000134595 5297 0.785 0.785 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
4. ZIC4 ENSG00000174963 2667 0.78 0.780 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
5. POU3F2 ENSG00000184486 2683 0.776 0.776 - POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
6. DTX4 ENSG00000110042 2639 0.767 0.767 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
7. HES5 ENSG00000197921, ENSG00000273529 9293 0.766 0.766 - hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
8. ZIC1 ENSG00000152977 18260 0.763 0.763 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
9. CKB ENSG00000166165 54181 0.762 0.762 - creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
10. DLL1 ENSG00000198719, ENSG00000275555 1642 0.762 0.762 - delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
11. RND2 ENSG00000108830 3761 0.759 0.759 - Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
12. SOX2 ENSG00000181449 19791 0.757 0.757 - SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
13. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.756 0.756 - tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
14. HOXB-AS3 ENSG00000233101 1776 0.754 0.754 - HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
15. WASF3 ENSG00000132970 6777 0.746 0.746 - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
16. ENPP2 ENSG00000136960 3320 0.743 0.743 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
17. RFX4 ENSG00000111783 1382 0.742 0.742 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
18. NRARP ENSG00000198435 1658 0.741 0.741 - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
19. RHBDL3 ENSG00000141314 2571 0.74 0.740 - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
20. SCUBE2 ENSG00000175356 1730 0.739 0.739 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
21. SOX1 ENSG00000182968 1339 0.739 0.739 - SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
22. LINC00461 ENSG00000245526 4465 0.735 0.735 - long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
23. FGFR3 ENSG00000068078 2862 0.732 0.732 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
24. TKTL1 ENSG00000007350 1212 0.731 0.731 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
25. SEMA5B ENSG00000082684 2716 0.73 0.730 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
26. GDF10 ENSG00000266524 711 0.73 0.730 - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
27. LINC00925 LINC00925 517 0.727 0.727 -
28. FAM181A ENSG00000140067, ENSG00000273533 1757 0.727 0.727 - family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
29. HOXB2 ENSG00000173917 6040 0.727 0.727 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
30. ARL4A ENSG00000122644 3071 0.722 0.722 - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
31. PDPN ENSG00000162493 5095 0.721 0.721 - podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
32. SYT2 ENSG00000143858 2364 0.719 0.719 - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
33. SLC1A2 ENSG00000110436 1231 0.718 0.718 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
34. CRABP1 ENSG00000166426 2178 0.717 0.717 - cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
35. KIF21A ENSG00000139116 4975 0.716 0.716 - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
36. SALL1 ENSG00000103449 458 0.715 0.715 - spalt like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10524]
37. CRNDE ENSG00000245694 3754 0.713 0.713 - colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
38. ZIC3 ENSG00000156925 420 0.71 0.710 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
39. ZIC5 ENSG00000139800 441 0.708 0.708 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
40. PAK3 ENSG00000077264 890 0.707 0.707 - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
41. GNAZ ENSG00000128266 493 0.705 0.705 - G protein subunit alpha z [Source:HGNC Symbol;Acc:HGNC:4395]
42. SLC1A3 ENSG00000079215 1362 0.705 0.705 - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
43. IGFBPL1 ENSG00000137142 3283 0.703 0.703 - insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
44. LHFP 5198 0.702 0.702 - lipoma HMGIC fusion partner, transcript variant X1
45. MSI1 ENSG00000135097 6935 0.701 0.701 - musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
46. TOX3 ENSG00000103460 1758 0.701 0.701 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA