Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VCP

Gene Name Gene ID Reads Annotation
VCP ENSGALG00000001986 23679 valosin containing protein [Source:NCBI gene;Acc:427410]











Genes with expression patterns similar to VCP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VCP ENSGALG00000001986 23679 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 valosin containing protein [Source:NCBI gene;Acc:427410]
2. NPL ENSGALG00000004614 617 1.544 - - - 0.841 - - - 0.703 - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
3. POGZ ENSGALG00000036365 4056 1.541 - - - 0.797 - - - 0.744 - - pogo transposable element with ZNF domain, transcript variant X2
4. PHF2 ENSGALG00000039208 2003 1.531 - - - 0.792 - - - 0.739 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
5. IGDCC4 ENSGALG00000007410 5457 1.528 - - - 0.764 - - - 0.764 - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
6. ENTPD4 ENSGALG00000000390 1394 1.515 - - - 0.812 - - - 0.703 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
7. TERF1 ENSGALG00000037453 4497 1.515 - - - 0.776 - - - 0.739 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
8. METTL14 ENSGALG00000012000 5876 1.493 - - - 0.718 - - - 0.775 - - methyltransferase like 14 [Source:NCBI gene;Acc:422684]
9. SLC25A3 ENSGALG00000011514 62606 1.491 - - - 0.775 - - 0.716 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
10. GLRX3 ENSGALG00000010464 22578 1.475 - - - 0.766 - - 0.709 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
11. PSMB4 ENSGALG00000000905 46735 1.441 - - - - 0.733 - 0.708 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
12. IBTK ENSGALG00000015864 3154 1.433 - - - 0.703 - - - 0.730 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
13. EMC3 ENSGALG00000003738 10363 1.419 - - - 0.710 - - 0.709 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
14. ARCN1 ENSGALG00000007430 21499 0.914 - - - - - - - 0.914 - - archain 1 [Source:NCBI gene;Acc:770561]
15. HSPA9 ENSGALG00000002363 31172 0.895 - - - - - - 0.895 - - - heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
16. ASRGL1 ENSGALG00000015949 403 0.89 - - - 0.890 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
17. TBK1 ENSGALG00000009840 1650 0.886 - - - 0.886 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
18. GFPT2 ENSGALG00000039705 562 0.885 - - - 0.885 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
19. DBN1 ENSGALG00000033405 216 0.885 - - - 0.885 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
20. SEC31A ENSGALG00000040484 20190 0.885 - - - - - - 0.885 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
21. C1orf21 ENSGALG00000020922 4035 0.883 - - - 0.883 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
22. KIF6 ENSGALG00000010057 84 0.882 - - - 0.882 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
23. SNORA31 SNORA31 183 0.881 - - - 0.881 - - - - - -
24. ITGA9 ENSGALG00000029378 415 0.88 - - - 0.880 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
25. MLH3 ENSGALG00000010304 231 0.88 - - - 0.880 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
26. GUF1 ENSGALG00000014217 211 0.879 - - - 0.879 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
27. ADCY9 ENSGALG00000007779 766 0.878 - - - 0.878 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
28. ENSGALG00000027412 ENSGALG00000027412 202 0.878 - - - 0.878 - - - - - -
29. VWDE ENSGALG00000042443 160 0.876 - - - 0.876 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
30. KIAA1432 KIAA1432 1792 0.875 - - - 0.875 - - - - - -
31. CSNK2A1 ENSGALG00000006197 41409 0.875 - - - - - - 0.875 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
32. TRIM62 ENSGALG00000028437 5124 0.875 - - - 0.875 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
33. RBFOX1 ENSGALG00000034325 2133 0.874 - - - 0.874 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
34. PASK ENSGALG00000006016 3096 0.873 - - - 0.873 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
35. ZBTB17 ENSGALG00000035352 280 0.872 - - - 0.872 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
36. TRAPPC12 ENSGALG00000016387 2593 0.871 - - - 0.871 - - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
37. PANK1 ENSGALG00000006431 2910 0.871 - - - 0.871 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
38. NDUFB6 ENSGALG00000002033 45494 0.87 - - - - - - 0.870 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
39. FRRS1 ENSGALG00000005418 332 0.87 - - - 0.870 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
40. ACAD9 ENSGALG00000005034 22100 0.869 - - - - - - 0.869 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
41. NECAB3 ENSGALG00000003065 417 0.867 - - - 0.867 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
42. RNPC3 ENSGALG00000005162 269 0.867 - - - 0.867 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
43. PM20D1 ENSGALG00000000724 2108 0.866 - - - 0.866 - - - - - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
44. CYP20A1 ENSGALG00000008730 930 0.866 - - - 0.866 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
45. NCOA3 ENSGALG00000004570 243 0.866 - - - 0.866 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
46. TGS1 ENSGALG00000015340 5897 0.865 - - - 0.865 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
47. DEPDC5 ENSGALG00000006766 1592 0.863 - - - 0.863 - - - - - - DEP domain containing 5, transcript variant X6
48. NME6 ENSGALG00000038044 1231 0.862 - - - 0.862 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
49. ATP5H 53898 0.862 - - - - - - 0.862 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
50. OLA1 ENSGALG00000009325 26414 0.861 - - - - - - 0.861 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
51. ITPKB ENSGALG00000009068 324 0.86 - - - 0.860 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
52. NR6A1 ENSGALG00000001073 2071 0.859 - - - 0.859 - - - - - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
53. LRRCC1 ENSGALG00000039499 480 0.859 - - - 0.859 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
54. CA3 CA3 200 0.858 - - - 0.858 - - - - - -
55. PDE4B ENSGALG00000011094 1871 0.858 - - - 0.858 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
56. MRPS30 ENSGALG00000014874 3416 0.857 - - - 0.857 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
57. ALDOC ENSGALG00000026077 106910 0.856 - - - - - - 0.856 - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
58. HINT3 ENSGALG00000044342 5674 0.856 - - - 0.856 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
59. IFT43 ENSGALG00000020415 1218 0.856 - - - 0.856 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
60. DYNLT1 ENSGALG00000019979 38176 0.855 - - - - - - 0.855 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
61. MOSPD1 ENSGALG00000006132 8503 0.855 - - - 0.855 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
62. HMHA1 HMHA1 929 0.855 - - - 0.855 - - - - - -
63. WDYHV1 ENSGALG00000030059 2961 0.854 - - - 0.854 - - - - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
64. AKT1 ENSGALG00000011620 4089 0.853 - - - 0.853 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
65. ASPH ENSGALG00000030112 1622 0.853 - - - 0.853 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
66. IRF6 ENSGALG00000001405 3144 0.852 - - - 0.852 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
67. WDR96 WDR96 255 0.852 - - - 0.852 - - - - - -
68. COG7 ENSGALG00000006156 4072 0.85 - - - 0.850 - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
69. COPA ENSGALG00000009153 11618 0.85 - - - 0.850 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
70. ABCD2 ENSGALG00000042554 1607 0.848 - - - 0.848 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
71. PRKD1 ENSGALG00000009900 2094 0.848 - - - 0.848 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
72. KIAA1462 1612 0.847 - - - 0.847 - - - - - - KIAA1462, transcript variant X4
73. ELMOD1 ENSGALG00000017169 2303 0.846 - - - 0.846 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
74. ARPP19 ENSGALG00000017370 1720 0.846 - - - 0.846 - - - - - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
75. ENSGALG00000012158 ENSGALG00000012158 11937 0.844 - - - - - - 0.844 - - -
76. GTF2F2 ENSGALG00000016974 7524 0.844 - - - 0.844 - - - - - - general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
77. NUDT4 ENSGALG00000011285 2998 0.841 - - - 0.841 - - - - - - nudix hydrolase 4, transcript variant X5
78. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.841 - - - 0.841 - - - - - -
79. PSMC6 ENSGALG00000012408 52068 0.84 - - - - - - 0.840 - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
80. DPP8 ENSGALG00000007437 1763 0.84 - - - 0.840 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
81. MCCC2L ENSGALG00000011255 889 0.84 - - - 0.840 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
82. VPS13B 2293 0.84 - - - 0.840 - - - - - - vacuolar protein sorting 13 homolog B
83. PRDM4 ENSGALG00000012619 876 0.839 - - - 0.839 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
84. PDCD5 ENSGALG00000004648 22576 0.839 - - - - - - 0.839 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
85. DBNDD2 ENSGALG00000003921 8301 0.839 - - - 0.839 - - - - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
86. GALNT12 ENSGALG00000013197 1330 0.838 - - - 0.838 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
87. MAEA ENSGALG00000013310 13230 0.837 - - - - - - 0.837 - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
88. PTRHD1 ENSGALG00000016610 3636 0.837 - - - 0.837 - - - - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
89. ASCC1 ENSGALG00000026019 3583 0.837 - - - 0.837 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
90. BTG1L ENSGALG00000004676 2293 0.837 - - - 0.837 - - - - - - protein BTG1-like
91. PPP4R2 ENSGALG00000007810 15127 0.837 - - - - - - 0.837 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
92. ATP5F1 80590 0.836 - - - - - - 0.836 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
93. EPRS ENSGALG00000009598 26412 0.836 - - - - - - 0.836 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
94. NEK7 ENSGALG00000002216 4532 0.835 - - - 0.835 - - - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
95. CREB1 ENSGALG00000008494 2219 0.835 - - - 0.835 - - - - - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
96. EXOC7 ENSGALG00000002050 9612 0.834 - - - - - - 0.834 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
97. PPFIA1 ENSGALG00000035774 5258 0.834 - - - 0.834 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
98. C12orf45 C12orf45 2445 0.834 - - - 0.834 - - - - - -
99. ST3GAL6 ENSGALG00000015252 1408 0.833 - - - 0.833 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:NCBI gene;Acc:395138]
100. DAK DAK 13208 0.831 - - - - - - 0.831 - - -

There are 409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA