Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VCAN

Gene Name Gene ID Reads Annotation
VCAN ENSGALG00000015624 11489 versican [Source:NCBI gene;Acc:395565]











Genes with expression patterns similar to VCAN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VCAN ENSGALG00000015624 11489 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 versican [Source:NCBI gene;Acc:395565]
2. ITGA9 ENSGALG00000029378 415 1.694 - - - 0.784 - - - 0.910 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
3. BAG3 ENSGALG00000009433 6152 1.646 - - - 0.702 - - - 0.944 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
4. UBE2D1 ENSGALG00000021213 5876 1.627 - - - - - - 0.717 0.910 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
5. TSC22D2 ENSGALG00000027591 6594 1.614 - - - - - - 0.715 0.899 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
6. GFPT1 ENSGALG00000036391 14025 1.613 - - - 0.719 - - - 0.894 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
7. ASB9 ENSGALG00000016563 2780 1.568 - - - - - - 0.722 0.846 - - ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
8. SNAI2 ENSGALG00000030902 8201 1.562 - - - - - - - 0.852 - 0.710 snail family transcriptional repressor 2
9. ZNF644 ENSGALG00000034253 28348 1.491 0.788 - - 0.703 - - - - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
10. EIF5B ENSGALG00000016764 30681 1.488 0.752 - - 0.736 - - - - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
11. PARP1 ENSGALG00000009228 39433 1.444 0.705 - - 0.739 - - - - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
12. EHD3 ENSGALG00000009086 14407 1.421 - - - - 0.715 - 0.706 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
13. PTGFRN ENSGALG00000015464 14584 1.413 0.709 - - - - - 0.704 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
14. CKAP2 ENSGALG00000017025 25020 0.96 - - - - - - - 0.960 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
15. TCEA1 ENSGALG00000015274 2706 0.954 - - - - - - - 0.954 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
16. CHMP6 ENSGALG00000026428 18026 0.954 - - - - - - - 0.954 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
17. LATS2 4776 0.953 - - - - - - - 0.953 - - large tumor suppressor kinase 2
18. FGFR1OP ENSGALG00000011423 2418 0.951 - - - - - - - 0.951 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
19. KHDRBS1 ENSGALG00000003272 4249 0.95 - - - - - - - 0.950 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
20. BRCC3 ENSGALG00000005383 4844 0.949 - - - - - - - 0.949 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
21. SRP72 ENSGALG00000011403 13666 0.949 - - - - - - - 0.949 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
22. PPCS ENSGALG00000004882 5759 0.948 - - - - - - - 0.948 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
23. ACSL1 ENSGALG00000010628 2560 0.947 - - - - - - - 0.947 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
24. PEO1 PEO1 6747 0.947 - - - - - - - 0.947 - -
25. RNF214 ENSGALG00000036993 3729 0.947 - - - - - - - 0.947 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
26. CENPH ENSGALG00000014788 10601 0.946 - - - - - - - 0.946 - - centromere protein H [Source:NCBI gene;Acc:395316]
27. CEP170 ENSGALG00000010733 4177 0.946 - - - - - - - 0.946 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
28. SMIM12 ENSGALG00000030261 5860 0.944 - - - - - - - 0.944 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
29. KDM4A ENSGALG00000010074 7219 0.943 - - - - - - - 0.943 - - lysine demethylase 4A
30. MRPL18 ENSGALG00000011625 7855 0.941 - - - - - - - 0.941 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
31. RDM1 ENSGALG00000000243 3388 0.941 - - - - - - - 0.941 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
32. UCK2 ENSGALG00000003510 2512 0.94 - - - - - - - 0.940 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
33. TRMT44 ENSGALG00000015594 1490 0.94 - - - - - - - 0.940 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
34. NR2F2 ENSGALG00000007000 4911 0.939 - - - - - - - 0.939 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
35. DNAJA1 ENSGALG00000023066 3820 0.938 - - - - - - - 0.938 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
36. TMEM59 ENSGALG00000010746 4669 0.938 - - - - - - - 0.938 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
37. PYCR1 ENSGALG00000007300 7987 0.938 - - - - - - - 0.938 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
38. MAST2 ENSGALG00000010313 2975 0.937 - - - - - - - 0.937 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
39. MRPS23 ENSGALG00000005559 10360 0.937 - - - - - - - 0.937 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
40. NET1 ENSGALG00000008437 9850 0.936 - - - - - - - 0.936 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
41. GOLGB1 ENSGALG00000041494 2376 0.935 - - - - - - - 0.935 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
42. LIG3 ENSGALG00000002288 7198 0.934 - - - - - - - 0.934 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
43. VGLL4 ENSGALG00000004937 3762 0.934 - - - - - - - 0.934 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
44. AHCTF1 ENSGALG00000010630 4809 0.933 - - - - - - - 0.933 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
45. DUSP14 ENSGALG00000027641 3662 0.932 - - - - - - - 0.932 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
46. SNAP29 ENSGALG00000040128 3581 0.931 - - - - - - - 0.931 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
47. REV3L ENSGALG00000015033 1917 0.931 - - - - - - - 0.931 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
48. MTMR9 ENSGALG00000016649 2055 0.93 - - - - - - - 0.930 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
49. DCTN5 ENSGALG00000006088 3113 0.93 - - - - - - - 0.930 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
50. MTERFD1 MTERFD1 3640 0.93 - - - - - - - 0.930 - -
51. NCAM1 ENSGALG00000007839 19929 0.93 - - - - - - - 0.930 - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
52. gga-mir-1772 ENSGALG00000025300 2892 0.929 - - - - - - - 0.929 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
53. CHAF1A ENSGALG00000001126 6506 0.929 - - - - - - - 0.929 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
54. CAMSAP2 ENSGALG00000002145 6109 0.929 - - - - - - - 0.929 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
55. STX18 ENSGALG00000015012 1489 0.928 - - - - - - - 0.928 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
56. AMMECR1L ENSGALG00000026728 2134 0.928 - - - - - - - 0.928 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
57. SMARCC1 ENSGALG00000032642 4842 0.928 - - - - - - - 0.928 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
58. GLG1 ENSGALG00000039818 6221 0.927 - - - - - - - 0.927 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
59. CHMP3 ENSGALG00000015805 11581 0.927 - - - - - - - 0.927 - - charged multivesicular body protein 3
60. FBXO33 ENSGALG00000010192 2917 0.927 - - - - - - - 0.927 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
61. HDGFL2 ENSGALG00000027068 1300 0.927 - - - - - - - 0.927 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
62. CARS2 ENSGALG00000016847 3814 0.926 - - - - - - - 0.926 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
63. ENSGALG00000014190 ENSGALG00000014190 5735 0.926 - - - - - - - 0.926 - -
64. BTG1L ENSGALG00000004676 2293 0.925 - - - - - - - 0.925 - - protein BTG1-like
65. PKP4 ENSGALG00000012561 3087 0.925 - - - - - - - 0.925 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
66. SLC25A1 ENSGALG00000041760 4744 0.925 - - - - - - - 0.925 - - solute carrier family 25 member 1, transcript variant X2
67. NEMF ENSGALG00000012263 2250 0.924 - - - - - - - 0.924 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
68. ABCA3 ENSGALG00000037837 1606 0.923 - - - - - - - 0.923 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
69. NDUFAF1 ENSGALG00000008587 14779 0.923 - - - - - - - 0.923 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
70. TXNDC5 ENSGALG00000012784 4678 0.923 - - - - - - - 0.923 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
71. ARHGEF4 ENSGALG00000002193 558 0.923 - - - - - - - 0.923 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
72. ALG9 ENSGALG00000021174 745 0.922 - - - - - - - 0.922 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
73. CC2D2A ENSGALG00000014514 1180 0.922 - - - - - - - 0.922 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
74. H3-I H3-I 1498 0.922 - - - - - - - 0.922 - -
75. ADIPOR1 ENSGALG00000000094 1862 0.922 - - - - - - - 0.922 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
76. C7orf25 ENSGALG00000040161 694 0.921 - - - - - - - 0.921 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
77. PNISR ENSGALG00000015483 7711 0.921 - - - - - - - 0.921 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
78. RP9 ENSGALG00000035453 1186 0.921 - - - - - - - 0.921 - - retinitis pigmentosa 9 (autosomal dominant)
79. TFEB ENSGALG00000039878 881 0.921 - - - - - - - 0.921 - - transcription factor EB [Source:NCBI gene;Acc:419922]
80. MAPK9 ENSGALG00000039099 5467 0.921 - - - - - - - 0.921 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
81. ARRDC4 ENSGALG00000007012 1039 0.921 - - - - - - - 0.921 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
82. ZC3H3 ENSGALG00000043265 1638 0.921 - - - - - - - 0.921 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
83. NSRP1 ENSGALG00000004186 1683 0.92 - - - - - - - 0.920 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
84. REXO1 ENSGALG00000001043 3179 0.92 - - - - - - - 0.920 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
85. PWWP2A ENSGALG00000038202 3686 0.92 - - - - - - - 0.920 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
86. gga-mir-1306 ENSGALG00000025271 1231 0.92 - - - - - - - 0.920 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
87. RGS17 ENSGALG00000026034 707 0.92 - - - - - - - 0.920 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
88. SMC6 ENSGALG00000016467 3321 0.919 - - - - - - - 0.919 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
89. TRIM24 ENSGALG00000012823 2725 0.919 - - - - - - - 0.919 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
90. ERGIC2 ENSGALG00000007183 12870 0.919 - - - - - - - 0.919 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
91. GTDC1 ENSGALG00000012424 1446 0.918 - - - - - - - 0.918 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
92. DEPDC7 ENSGALG00000011681 1181 0.917 - - - - - - - 0.917 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
93. APOOL ENSGALG00000006978 1953 0.917 - - - - - - - 0.917 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
94. NDUFB3 ENSGALG00000008239 15511 0.916 - - - - - - - 0.916 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
95. ARFRP1 ENSGALG00000006101 3743 0.916 - - - - - - - 0.916 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
96. ATP8B4 ENSGALG00000002326 456 0.915 - - - - - - - 0.915 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
97. MED24 ENSGALG00000013506 5403 0.915 - - - - - - - 0.915 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
98. SLC35E3 ENSGALG00000009940 8560 0.915 - - - - - - - 0.915 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
99. NGEF ENSGALG00000036327 1048 0.914 - - - - - - - 0.914 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
100. INOS INOS 313 0.914 - - - - - - - 0.914 - -

There are 343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA